EWM23615.1, cds7058 (CDS) Nannochloropsis gaditana

Overview
NameEWM23615.1
Unique Namecds7058
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:388666..389403 -

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Properties
Property NameValue
Protein idEWM23615.1
ProductHypothetical protein
Orig transcript idgnl|cribi|Naga_101085g1.4398.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:388666..389403 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom
IPR001849PH_domain
Homology
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BLAST of EWM23615.1 vs. NCBI_GenBank
Match: gi|585104765|gb|EWM23615.1| (Hypothetical protein Naga_101085g1 [Nannochloropsis gaditana])

HSP 1 Score: 486.878 bits (1252), Expect = 7.614e-174
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0 
Query:    1 MSMSTATDVSPPSPLPVAERLAPSCRGPLKQSLSSSCLPASPPAPHLARLSGPLYKRKDHLTWKWRPRLFRAHHEDFLLFYYLPRTSPVTVPPRGVVPLVGCAVHVMHTAEVIGGGDRKRCGYVFEVRHAWLGKPWVLAAETEEERERWVRGLRRLIREAHAALSLGGEEEEECMGEEEEEGEKEVEEEHLERLVWPGYEEAVQAALKRLLEYAEVGWGRWTVSRGSGNRLLPGACARRGECVRD 245
            MSMSTATDVSPPSPLPVAERLAPSCRGPLKQSLSSSCLPASPPAPHLARLSGPLYKRKDHLTWKWRPRLFRAHHEDFLLFYYLPRTSPVTVPPRGVVPLVGCAVHVMHTAEVIGGGDRKRCGYVFEVRHAWLGKPWVLAAETEEERERWVRGLRRLIREAHAALSLGGEEEEECMGEEEEEGEKEVEEEHLERLVWPGYEEAVQAALKRLLEYAEVGWGRWTVSRGSGNRLLPGACARRGECVRD
Sbjct:    1 MSMSTATDVSPPSPLPVAERLAPSCRGPLKQSLSSSCLPASPPAPHLARLSGPLYKRKDHLTWKWRPRLFRAHHEDFLLFYYLPRTSPVTVPPRGVVPLVGCAVHVMHTAEVIGGGDRKRCGYVFEVRHAWLGKPWVLAAETEEERERWVRGLRRLIREAHAALSLGGEEEEECMGEEEEEGEKEVEEEHLERLVWPGYEEAVQAALKRLLEYAEVGWGRWTVSRGSGNRLLPGACARRGECVRD 245
The following BLAST results are available for this feature:
BLAST of EWM23615.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104765|gb|EWM23615.1|7.614e-174100.00Hypothetical protein Naga_101085g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7075rna7075Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications