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Properties
| Property Name | Value |
|---|
| Product | Complex 1 LYR protein |
| Orig transcript id | gnl|cribi|Naga_100137g5.22.mrna |
| Orig protein id | gnl|cribi|Naga_100137g5.22 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:378502..379499 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7071 ID=rna7071|Name=rna7071|organism=Nannochloropsis gaditana|type=mRNA|length=1868bp
GAGGCTCGCTGCCTGAGGCTCCCGACCGCCTTCATCACCAAGGAACCCGC
CTTGATGTCATACAACGCACTTACATACTTCTCGTTCACGGTGACATTTG
CGCCCACAGGAGGAGCTTGAATTTTGAGTGGAGATCGCGTGTTTCGGGCA
GCTGCCAAGCAGTTTTTCCCCCTCTCTTTTCGATACGTATATCACCGGTG
GTAAGGCTCCCGTGGAAGCAAGGCTTTTGGACGTCTTTTTGGAATGACAG
GATTAAATTGTTGCAGAGAGAGCAACAGAAGTTTTTGTAGCAATAATGAT
TCCTGTAATTTGAGCTCAACCGCGAGCAAGTGTCGGCAGGGACGCAGAAA
GGCGCACCTAAGATGTCACGTGCCCGTAATAGGCACGAGACCCTTCCTCC
TCCTCCTCCTCTTCCCCCTCATCAATCTCGTAGCTCCTACCCATGGAGCC
AAGCTGTGGAAGCTGCCACTTACAAATCCCCTTCAATGGCTTCGCCCGGG
CGGGGACACGCGCCACTTACAGGCCACAGTGCGGGCCCTTGAGTCCGAGC
TGAGTCGTCTCCGAACCTTGCATACGGCACATTTAGACGAACTGCGGCGT
CTGCGAGCCAAGCGTGCGGAGGACTTCGCGCGATTTCGGGAGGCCGGGAA
GCAGCAAGCGGCCGAGAACGAGAGGGTGCGAGAAGCAGCAGTGCAGGCCT
TGGCGCGGGCGCAGGAGAAGGAGGACCGGATAGAAGAGGAGCTGGAGAGG
GAAAGGAAGAGGTGGAGGACGGAGGCGGAGACGGCGATAGGGCAGGCGGT
GAGGGAGGCTGTGGAGGAAGAAAGACGGAAGGGGAAAGAAGTGGTAGGGA
GGTTGGAAAGCGCCTTGGCGGCCGCACGTGCGGCGGGTGCGAACGAAGAG
GAGGAAAGGGAGAAGGAAGATGAAGGATTGCGAGCCTTGCAGGAAGCCTT
CGAGAAGGAACGGAGGCAGTTTAAGAAACGCTTAGGCGCAGAAAGAGAGT
TGGTGGAGGTGACTCTGGCCAGGGAGGAGAAGCTGCAGCAAGTTATTCTC
AAATTAGAGGCCAGCAACCACGCACTCAAGGCGGAGGTGGGCCAATTGAC
GGAGGGGAAGGAGGGGAAGGAGGTGAAGGTACCCATCGAGAGCAGGGACC
AGGTGCTGACCGACAGACCTGCGGCGACAGTAAGCGAGACCCGGGCACCA
AGTGCGACCTCCCCACCCGTCCCGGCGCCTCCTCAAAGCCCGGTGACAGC
AGGGCGGATTAAAACATCCAATACAAAGATGGTAGAGGAATGTGGAAGCG
CTTCCGCCCCCCCGGCATCGGTATCGTCCACGGTGGCGGATCCAAGCTTG
CCCTCTCCCAACACCAGCAGCAGCCACAGCAGCAGCAAGAGCAAGAGCAG
CCCGTCGGGGGCCAGGAAATTAAAAAACGTTGGAAAGCCCAAAGCTTCTG
TCAGGAAAGCAAAAACGAAACCTGGCTTGGGAGGGAAGATGGAGACGGCC
CCAGCGAAGAAAAAGAAAGCGACAACCTCCCGCCCCTCGTCTTCCTCCGC
GTCCTCCCTCCCTGCCTCCTCAGGGTCAGGACGAGCCTCCGCCGCTCGAC
CGGGGCGCCAGCCCGTTACTCCCACGCTCAAGAAAGGGGGTCTGGGCGCT
CCCCACAAATAAGGAGGGCAGGAGGGCAGGAGGGATGGGAAGGAACGGGG
GGAAAGCACGAGAAAGGCGGGGTTCGCGGCGGGGAAAGCGATGCGATAGG
GAAAGGGCTAGACGAGGGACCTTCGCTATCGGCGAGGAGTCCGATGGGCA
GGAAAGGGGACGCGAGCAAGACCGTGGAAGGGTAGGGCCTTTTGTAAAGC
AATGACCTAGTCTAGGAC back to topprotein sequence of rna7071 >rna7071-protein ID=rna7071-protein|Name=rna7071|organism=Nannochloropsis gaditana|type=polypeptide|length=146bp
MSTSAAAAAKASTGLKSSVLGGYRRLLRLRLRVFQGDQYAMDQARLQLRT
EFNKHRHVQDHRELEGLVAGIREVEEMFSENIVQGRLNEAGNYEVRLRPE
VHLKGKEHEMVTHVDDRLVGDTVVVERSRAPRDGSAPGGSCQSGKG back to topmRNA from alignment at CM002470.1:378502..379499- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7071 ID=rna7071|Name=rna7071|organism=Nannochloropsis gaditana|type=mRNA|length=998bp|location=Sequence derived from alignment at CM002470.1:378502..379499- (Nannochloropsis gaditana)
CCCGAGTGGATTGCTTCAGTCAACACGACGGCCCCTTTGCGTGCGGGTTT
TAATGTGGCCAGGACTAGGGAGACAGGAAGGGCTTGAAGGCCGGGGAGAA
GGCTTCTCGTCGCTCCGCTTGGCGAGCTTCATTGCCCCTGAAACACGTCT
CAGCGCACACAAGACAGCTGTGTTCTGGGATGCCAAGAATACATTCTACG
CATGTAGCTCTGAGTTCACACGTTTGAATCAGTATCTGCTAGTAGTCGAG
CATTCCAGAACCCTGAGGGAAAAGTATCTTTCCTTACTTCTAATTATGAT
CCTGCTCTCTCAAGGAAACCATGTCGACCAGCGCTGCTGCTGCTGCTAAG
GCTAGCACAGGGTTGAAAAGCAGTGTACTGGGTGGATATCGTCGATTGCT
ACGACTGCGCTTGAGAGTCTTTCAGGGAGACCAATACGCGATGGACCAAG
CACGGCTACAGCTTCGCACCGAGTTCAATAAGCACCGGGTATGTCCATGG
GGAGGCAATAAAGTCAGCAAGGAGACAATCAATGAAGGCGTTTGATAGGC
TTACATTTGTATGGAAGCGTGAAAAAGTGGCCTTCGATAGTTTTCTCCAA
AAATTTAACACGGTTCTTTATCCAGCAATCTCGACCTCTGATCGCCTCCT
CCCTCTCCAGCACGTCCAGGACCACCGCGAGCTTGAGGGGCTGGTAGCGG
GCATCCGGGAAGTGGAAGAGATGTTCAGCGAGAACATTGTCCAAGGACGT
TTGAACGAGGCGGGAAACTACGAGGTGCGCTTGCGCCCCGAGGTGCATTT
GAAAGGCAAAGAGCACGAAATGGTCACGCACGTGGACGACAGGCTTGTGG
GCGACACCGTGGTGGTGGAGAGGAGCAGGGCGCCCAGGGACGGATCGGCA
CCCGGAGGATCCTGTCAAAGTGGGAAGGGGTAGGGTTCGCGAGCAGGACA
CCGGTAAAAAGGGAACCGGAAAAGAAAGCAAGCTCTCGTGGCATTTCC back to topCoding sequence (CDS) from alignment at CM002470.1:378502..379499- >rna7071 ID=rna7071|Name=rna7071|organism=Nannochloropsis gaditana|type=CDS|length=882bp|location=Sequence derived from alignment at CM002470.1:378502..379499- (Nannochloropsis gaditana)
CACGTCCAGGACCACCGCGAGCTTGAGGGGCTGGTAGCGGGCATCCGGGA
AGTGGAAGAGATGTTCAGCGAGAACATTGTCCAAGGACGTTTGAACGAGG
CGGGAAACTACGAGGTGCGCTTGCGCCCCGAGGTGCATTTGAAAGGCAAA
GAGCACGAAATGGTCACGCACGTGGACGACAGGCTTGTGGGCGACACCGT
GGTGGTGGAGAGGAGCAGGGCGCCCAGGGACGGATCGGCACCCGGAGGAT
CCTGTCAAAGTGGGAAGGGGTAGATGTCGACCAGCGCTGCTGCTGCTGCT
AAGGCTAGCACAGGGTTGAAAAGCAGTGTACTGGGTGGATATCGTCGATT
GCTACGACTGCGCTTGAGAGTCTTTCAGGGAGACCAATACGCGATGGACC
AAGCACGGCTACAGCTTCGCACCGAGTTCAATAAGCACCGGCACGTCCAG
GACCACCGCGAGCTTGAGGGGCTGGTAGCGGGCATCCGGGAAGTGGAAGA
GATGTTCAGCGAGAACATTGTCCAAGGACGTTTGAACGAGGCGGGAAACT
ACGAGGTGCGCTTGCGCCCCGAGGTGCATTTGAAAGGCAAAGAGCACGAA
ATGGTCACGCACGTGGACGACAGGCTTGTGGGCGACACCGTGGTGGTGGA
GAGGAGCAGGGCGCCCAGGGACGGATCGGCACCCGGAGGATCCTGTCAAA
GTGGGAAGGGGTAGATGTCGACCAGCGCTGCTGCTGCTGCTAAGGCTAGC
ACAGGGTTGAAAAGCAGTGTACTGGGTGGATATCGTCGATTGCTACGACT
GCGCTTGAGAGTCTTTCAGGGAGACCAATACGCGATGGACCAAGCACGGC
TACAGCTTCGCACCGAGTTCAATAAGCACCGG back to top
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