rna7060, rna7060 (mRNA) Nannochloropsis gaditana

Overview
Namerna7060
Unique Namerna7060
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2153
Alignment locationCM002470.1:348781..349553 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100137g21.19.mrna
Orig protein idgnl|cribi|Naga_100137g21.19
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:348781..349553 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100137g21gene6826Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7060rna7060-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23617.1cds7043Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7060 ID=rna7060|Name=rna7060|organism=Nannochloropsis gaditana|type=mRNA|length=2153bp
CGCATAAAAATCACTTTTTCCCCACTCTCTGCCTCCTGAGTGGTATATTC
CGGGAGAGTTAGTTCGGCAATCTCGGCGATGGCCTGGGTGATACAAGGGA
GAGGCTTTTCAAGAGGGAGGGTTAACCCTCACCCCCACCGCTACGCTGAG
TCGCTTTTAGGCGTAGAGTATTTCATGAAACCGCAATTGATGAAGTCATT
ATGATAAAGTCAGGTCCCCAAAAGGTCATGTGGAAAGATCTTGTTGTAAT
TCGTCTGACTTTGAGCGGTCAGCACTCCAGAGCTGAACGATGAGTTCCAT
AGGAGATCGTCTGTCCTCGCGTCATAGTCATACTGAATTCCACACACATC
CCATTAAAAGGTAAGCAGGAGGTCGCAGCATGCCACCATGTCGTCGACGT
TGGAGCCGAAATTCCTTTTGAACCGATTGCTTGCCAGCACGTGGTCATCG
GCTGACTTTGCGGCCTTTCTCAAGAGCAAGCCCGCGTTCCTGTCGGAGGT
CTTGAATGTTTTCAGCACCCTCGACCAAAGCATCAAACTGCGTGTCCTTT
TGGCATTTCGAGCCCTGGACAAGGCGGACGCCGCAAAATTGCCCAAGGAT
CTGCTCCTTGCCATCTTAGACCAGGCCGCCGGAGATGGGGACGAGTGGGT
GAACGTCTGTGCGTCCCTGGTCCGGGAGGTCCTTGTCGATGCCACTGCCA
ACGTGACAGGCTCAAACTCCCGCCTTCCAACCGCCGAGGTAATAGCGGAC
GTCCTGAAGAAAAGCGGCCTGGTCACGGCGGCGCCGGGAGAGGAGGAATC
CCCCGTGGAGAAGCCGGCGGAGGCTACCGGGACGGTCGAGCCGAAGGTCG
CGGATTCATCTCCCAAAGCGGCTCGTCAAGTCACCCCCGAGCCATACTTC
TGCCCCAAGGAATACCTGTACCTGTCCGAAGCCCTCATCCAACGCTGTCA
TCGCTCGGCGCCCTTGACGCGCAAGCAGAATGCCCACTTCGTCCTCGGCG
ACCTCCGGGAGGTGGAGATGGAGCCCGTACCCGACACAGGCCTCATGCCC
TCGCCTGCACCCTTCTCCCTCCCGCCTTCCTTCGCGACAAACTCCTCCTC
TTCGTCTTCCCTCCCTCATGAGCAGCCCCCACCGCCTCCCCCTGCCAGGG
CCCCCCCTGCCCGCCCTCCTCCTTCCGGCCCGCGGCCCGCGAAGCTCACC
GTCCCGGCCGGGGCGCGCACTTCGGTTCCCACCTCGTCTCTTCTTTCCCG
TGCCGCCCTATCCCAGCAACGTCGCACCGACAAGCCCCGCCTCAAGCTGC
TCAAACTTGATGAGGTCAAGTCCGGGGCCAAGCCGGCGCGGACAGCGGCT
CGGAACGAGGCGGTCTCCCACGAGTTTGGCAGCCAACCTCTCCGCCCGCA
GGCCCCCAAGGACAGGAGGGAGGAGCCCCCGCGGCCGTCGGTGGTCGACG
ACCAGCCTGGAGGAGCTGGGGCAGGGATCGAAGGGGGGGGGGGGCTCAGG
AAAGCCAGGACCCATACCGCCTCCCTTCCCTCCCTCCGCCCCTTCCTCGA
CACGTACCCTTGCCACACAAAGCACAGGCCGGGCTGGCCCCCTTTCCGCC
CCCCCTACGGCGGCTGTTGACCCCCCTCCCTCCCTCCCTTCGGCCGCGAC
CCCCCCGGACGCATTTTCCGATTACTACCGCATGAAGGCCCGCTCCAATT
GCTTGACGCCGGAGGACGACGAGGTCATCCGGAATTTTTACCTGCACGGG
GCCACGCTCGGTCACCAGGGCGAAGGGATGCCACGGCAGAAGAAAATCAA
GATCAACGAGGAGGAGCAAGAGAAGGAGGACGGAAGCCGCGTGAAGGAGA
CCCTGTACTTGACATTGAACATGGACAGCAAGAAGGCGGTCCTGTCCAGA
AAGGTCTCGCGAGCGAAGGAGTCAGGGGCGGCTGGGGCTCTGGGGGGTGG
GGGCAGATAGATGAGAGGCACCGCGGATCCTGAGCCTTCAGGCACAAGGG
AGAGAAGGGACAGCCGAGGTTGCGGGTATGCTTGAAGGCTTGAAGCAAGG
ACTAGTGAGTAGAAAGAAATGTCATGAAGAAATCATTTAACGTCGGACGG
AAAGAATATGTGCCCCCGCTAGAAGAACCTGCCTGCGGTGCCACTGGATC
TCA
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protein sequence of rna7060

>rna7060-protein ID=rna7060-protein|Name=rna7060|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MRGWEGEEGREEVGGGRGGRGTKGRTRDGDGASRGGGGGRGRGRGRRRGR
RSAQWVPWRRRGGGASGTASLSEGKEEDGESARRGAAGEAGASLGGLSPV
LALYWRAGSEAIAPKVLGEAEGTGPLGGRPGLGARSEGRPRAGGGGEEVC
R
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mRNA from alignment at CM002470.1:348781..349553+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7060 ID=rna7060|Name=rna7060|organism=Nannochloropsis gaditana|type=mRNA|length=773bp|location=Sequence derived from alignment at CM002470.1:348781..349553+ (Nannochloropsis gaditana)
ATGCgcggatgggagggagaggaggggagagaagaggttggggggggaag
aggagggcgggggacgaaggggaggacaagggacgGCGATGGGGCctcga
gggggggggggggaggaagggggagaggaagggggagaagaagggggaga
agaagtgCACAGTGGGTcccgtggaggcggcgaggggggggggcgtcggg
AACGGCCAGTCTCtcggagggcaaggaggaggatggggagtcAGCCAGAA
GGGGCGCGGCGGGAGAAGCCGGAGCGTCTCTGGGAGGGTTGAGTCCCGTC
TTGGCCCTCTACTGGCGCGCGGGGTCCGAGGCCATTGCCCCCAAGGTCTt
gggggaggcagaggggacGGGGCCCCTGGGAGGACGCCCTGGTCTGGGCG
CGAGGAGTGAAGGGCGTCCgagagcgggcggggggggggaagaggtgtgT
CGGTAGCCGCGCGAGGCCTGGACGAGGACTGCTTCCAGCAGCTTCGGAGG
GAATGGCATCAGGAGCTGGTGCCgtagggggggcgggaggaggaagggcg
ggaaggaaggaggaaaggaaagggcaagTTGTGGGGGCAGAGTAGGAAAC
AAAGTACCGAGCGGGTCAAGGAGGCCAAGAGGGCGTGGCAATATCGCTCG
TTACTGGCTCTTCCATTCCCGCAACACAAAGTAAATTGGGATTGACGGTC
GAACAAATGTATCCTGCACGGGCGCCAGGCCTCCCgtgtcttcttttcct
ttccacaccctttccccctccct
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Coding sequence (CDS) from alignment at CM002470.1:348781..349553+

>rna7060 ID=rna7060|Name=rna7060|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at CM002470.1:348781..349553+ (Nannochloropsis gaditana)
ATGCgcggatgggagggagaggaggggagagaagaggttggggggggaag
aggagggcgggggacgaaggggaggacaagggacgGCGATGGGGCctcga
gggggggggggggaggaagggggagaggaagggggagaagaagggggaga
agaagtgCACAGTGGGTcccgtggaggcggcgaggggggggggcgtcggg
AACGGCCAGTCTCtcggagggcaaggaggaggatggggagtcAGCCAGAA
GGGGCGCGGCGGGAGAAGCCGGAGCGTCTCTGGGAGGGTTGAGTCCCGTC
TTGGCCCTCTACTGGCGCGCGGGGTCCGAGGCCATTGCCCCCAAGGTCTt
gggggaggcagaggggacGGGGCCCCTGGGAGGACGCCCTGGTCTGGGCG
CGAGGAGTGAAGGGCGTCCgagagcgggcggggggggggaagaggtgtgT
CGGTAG
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Synonyms
Publications