EWM23617.1, cds7043 (CDS) Nannochloropsis gaditana

Overview
NameEWM23617.1
Unique Namecds7043
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:348781..349236 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23617.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100137g21.19.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:348781..349236 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23617.1 vs. NCBI_GenBank
Match: gi|585104768|gb|EWM23617.1| (hypothetical protein Naga_100137g21 [Nannochloropsis gaditana])

HSP 1 Score: 261.151 bits (666), Expect = 1.693e-87
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:    1 MRGWEGEEGREEVGGGRGGRGTKGRTRDGDGASRGGGGGRGRGRGRRRGRRSAQWVPWRRRGGGASGTASLSEGKEEDGESARRGAAGEAGASLGGLSPVLALYWRAGSEAIAPKVLGEAEGTGPLGGRPGLGARSEGRPRAGGGGEEVCR 151
            MRGWEGEEGREEVGGGRGGRGTKGRTRDGDGASRGGGGGRGRGRGRRRGRRSAQWVPWRRRGGGASGTASLSEGKEEDGESARRGAAGEAGASLGGLSPVLALYWRAGSEAIAPKVLGEAEGTGPLGGRPGLGARSEGRPRAGGGGEEVCR
Sbjct:    1 MRGWEGEEGREEVGGGRGGRGTKGRTRDGDGASRGGGGGRGRGRGRRRGRRSAQWVPWRRRGGGASGTASLSEGKEEDGESARRGAAGEAGASLGGLSPVLALYWRAGSEAIAPKVLGEAEGTGPLGGRPGLGARSEGRPRAGGGGEEVCR 151
The following BLAST results are available for this feature:
BLAST of EWM23617.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104768|gb|EWM23617.1|1.693e-87100.00hypothetical protein Naga_100137g21 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7060rna7060Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications