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Properties
Property Name | Value |
Product | zeta-carotene desaturase |
Orig transcript id | gnl|cribi|Naga_100200g6.10015.mrna |
Orig protein id | gnl|cribi|Naga_100200g6.10015 |
Gene | ZDS |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002456.1 | supercontig | CM002456.1:219247..221923 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna706 ID=rna706|Name=rna706|organism=Nannochloropsis gaditana|type=mRNA|length=1659bp ATGCTCCTTCTTAGAGCAGCGGCCCGCCGATGTGTGACCAAGTGTCCCTC GGCCGTGCTCCAGCCCCGTGTGAACGATTCCTCCTTTATTTTGGTACCCA ATCGGCCAAAAGTGGACTACATTCCTTCCTTTGAAGAATCTCGTAAAAGT CTTACGAAAATTGTCGCTACGATTGGCCCGGCCAGTGAACAATTTCCTGA GTTACAGGCCTGCGTCAAAAGCGGTATGCGTATCATGCGGTTGAATTTCT CACATGCTACGTACGAAGAAGCGAGCCTTCGGATTCAGAACCTTCGAAAA TCTCACGGGGTGCATTCTCAGGCAATAGGGGCAGCCTTCAATTTGCGAGC CGTGCTCCTGGACATCCAGGGGCCCAAGATTCGGACCGGGTCGTTCAAGG AGGGAAGCATTCTGCTGAAGCAAGGGCAGGAATACGAGCTCACGACGGAT GAAAGCGTGAAGCTCTCTGGCGACGAAAAGCGATTCTACGTGGACTACAA GCCCCTGTTCACCTCCACTAAAAAGGGCGACCCAGTGCTGATCGACGACG GGAACGTGGTCTTGGAGGTGGTGGGGCATCGCGAGGACGGCCAGGGAGTA CTCTGCCGGGCGCTGAACTCCGGGAAAATCAAGAACCGGCGGGGGGTCAA CGTGCCCAAGAGCAAGGTAGACCTGCCCGCCCTAACCACCAAGGACAAGG CTGACCTCTCCTTTGGGATTCAGAACGACGTCGACTTCGTCGCGGCCTCC TTTGTTCGGAAAGCCCAGGACATCCTCGACATCCGGGCGTACCTCAAGGA GGAGATGAGCAAATTCTGGCCGGCGACGCATTTGCTGCCCAAAATCATCG CCAAGGTGGAGAGCACGGAGGCGATTCAGAACTACGAGGAAATCATGCAG GCGGCGGACGGGATCATGGTGGCCCGGGGAGACTTGGGGGTGGAGATTGA CCAAGCCGATGTGACCAACATGCAAAAGATGATGATCCGCCGCTGTCGGA GCGTGGGGAAGCCCGTGATCGTGGCGACGCAGATGCTGGAGTCCATGCAG ATCAATCCGCGACCCACACGGGCCGAAGTCTCGGACGTGACGAACGCGGT GTACGACGGTGCCGATTGCGTGATGCTTTCGGGGGAGAGCGCCCAAGGCA AGTATCCCGTCGAGTCCGTCGCCACTATGCGCAGCATCATCGACGCTGCC GAGACGTGGATAAGCCGAAACCCGGTTCACCAGCACAAGCTCATCCTCCG CAACATGGAGAAGCACGAAACGGGAATTATGGACGCGCCGGCGAGTTTCT ACGACGCGGCGGCAAGCGCGGCGGTCCAAGCGGCGTTTCGTCTGAAGGCC AAATGCATCATTGTGCACACTGAAGAGGGGACCTTGGCCCGCACAGTGGC GAAATACCATCCATTTGTGCCCTGCATGTGCTTCACTGGCTCGCAAAAGG TGGCGAAACAGCTCATCATCCATCGCGGACTTCACCCTATCGTCATTCCC AACGGTCACCTCTGGCGAGAGAATAAAGCGGCCGTTTTGGACCATGCCCG GCGGCTTGGCTTCGTGCAACGGGGGGACCGTGTGGTGGTGTTGACGGGCG AGCTTCAGCACGAAGGCTCCAATATGACGAGTGGGACGTATTTTATGGAT GTGAAATAG back to topprotein sequence of rna706 >rna706-protein ID=rna706-protein|Name=rna706|organism=Nannochloropsis gaditana|type=polypeptide|length=620bp MALRKRIAGLVAVITLVQSTYSIATAFLLPHTTRVSQPHRSTSPASTTRA PASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGII GGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHV FFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGA PVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDG ISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAV RSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDAST GAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGI QKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEING DFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTP GDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPG MDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKT IKARASSKEDMIKEAAVMSA back to topmRNA from alignment at CM002456.1:219247..221923+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna706 ID=rna706|Name=rna706|organism=Nannochloropsis gaditana|type=mRNA|length=2677bp|location=Sequence derived from alignment at CM002456.1:219247..221923+ (Nannochloropsis gaditana) TTTCAGACAGGGCCCGCTGACGCACACGCTCCTTCAAAGTTCAGCTTCCG
TTCGACCCGACCTCAAACCCACACTTTTTGCATAAAAACATACACACAGA
GCGTTGGacccaagaagaaggagggtgatggcGCTCAGGAAAAGGATCGC
AGGCCTGGTGGCGGTCATCACACTTGTCCAGTCCACTTACTCCATCGCCA
CTGCGTTCCTCCTACCTCACACGACGCGTGTTTCACAGCCCCATAGATCG
ACAAGTCCAGCTTCCACAACACGGGCGCCCGCTTCCACGCTTCCTGTCGA
ACAAGTTCGTGGCTCAGATAAGGAAAAGCTTCTGGACCTGTCGGTGTTGG
ATCGTGCGATGTCAGGCCCCCCTGCAAATCTGAGGGTGAAGGACACGAGC
ACCGAGCGACTGCGCGTGGGTATTATAGGTGGAGGTCTCGGTGGACTGAT
CACAGCGATGGATTTGTCCGAGGCAGGGCACGAGGTTGAGATTTTCGAGG
CGCGTCGTTTtgcgggggggaaagtaGGGTCGTgggtggacaaggacggc
AACCACATCGAGATGGGTGAGTCCGGAGAGCatgaggaggcgggaaagag
aggaataTAAGAAACGATGTAGCGTTCTCATTTGTGTCTTAACAAGACGT
TCCAGAGATCCTCGGGCCATGGGAGAGTTACAATTTGCAGGAAAGGCCAT
GGCTGTCTTTTTTCTACATCCTCAagttttcttccttttgtcttccctcc
ccttccaggacTGCACGTCTTCTTTGGTTGCTACTACAATCTTTTTGGGA
TCATGAAACGGTTGGGGGTCTTTGAGTCCTCTCTTCGCCTCAAAGATCAC
ACCCATTCCTTCATTAATAAGGGCGGTAGGGTCGGCGAGCTCGATTTTCG
CTTCGGCGGCATCGGCGCCCCTGTGAACGGCTTGAAAGCTTttgccacca
cctcccaACTGGAAATCGGGGACAAGATTGCCAACGCCGTGGCCTTGGCG
ACCAGCCCCGTCGTGAAAGCCCTCTTCGACTTCGacgcggccatggagga
TGTCCGGGCCTTGGACGGCATCTCTTTCTCGGAATGGTTCctgaggaaag
gggggagccGGGGCAGCATGACGCGGATGTGGGACCCGATTGCGTACGCC
TTGGGGTTTATCGATTGCGACCACATCTCGGCCCGGTGCATGCTGACGAT
CTTCCAGCTTTTTGCCGTGAGGTCGGAGGCCTCGGTATTGCGCATGTGTG
AGGGCTCCCCCAACACGTATCTACACGAACCCATTTTGGCGTATTTGAAA
GCGCGGGGGGTGACCTTGCACCTGAACAGCCGCATTCAGGACTTGGTCTA
CGACACGGACGCCAGCACAGGGGCACCCTCCCGTGTGAAGGGCCTGGTAT
TATCAGGGAAAGCCAacacggaggacgggaaggaggccggggcggcgggc
ggggttGGGGCCGCGGGCGAGCAACGCTTGTTTGATTGCGTGGTTGCTGC
GTGCGACGTGCCTGGGATCCAAAAATTGCTGCCGGAGTCCTTCCGTAAAA
TCCAGGAGTTCGACAACATCTACCGCCTAGAAGCCGTTCCCGTCACCACG
GTGAGAAGCGGGCGATGGGGGGGTCAAGGGGGGACCGCGCTTGGAAAGCC
ACGGCTCCGTGGTTTGCTCTGTTCATTGTCCTGAGGGAACACTGTGCCTT
TTTAGTGCTTGACatttctcctcgctctcggtATCACCCTCGCACAGGTC
CAACTCCGATTCAACGGCTGGGTAACGGAACTCAACGACCCCGTGCGGAT
GAAAGAAATCAATGGGGACTTTTCCAACGGGCGCGCTCCGGGCCTGGACA
ACCTCCTCTACTCAGCGGACGCGGAATTTTCTTGCTTTGCCGACCTGGCG
TTGACCAGCCCGGCGGAATAttacaaggaaggggaagggtcGTTGTTGCA
ATGCGTCCTGACCCCGGGAGACAAATGGATGCCGGTCTCGACGGAGAAGA
TCGCGGAGGCCACGTTAAAACAAGTTTTGGATCTGTTCCCGTCGGCGCGT
GGCTTGGAGTGCACCTGGACCAACGTGGTGAAGCTCGGCCAGTCCCTCTA
CCGCGAGGCCCCCGGGATGGACGTATACCGACCCAAACAGAAGAGTCCCG
TGGAGAACTTCTACCTGGCTGGCTCCTATACATATCAGGACTACATTGAT
TCCATGGAAGGGGCAACGAAGAGTGGGCTCTTGTGTGCAGATCAGATACT
GAGAGACGCCAAGACCATCAAGGCCAGGGCCAGCTCGAAGGAGGATATGA
TTAAGGAGGCAGCGGTCATGTCCGCGTGAGGAGGAGTcagagaaaaaaat
gagaaggACGGGGATTGAACAGTAGGTAGTAGTGTCATGATTCATGATGC
AGAGAGATATTTAGGGATTGGCTGTGCTTGAACGATAGAATATCACTTAC
ACAAGCTAGCATAAGCCAAACTGAGGAGTGACGCGAAAACACGACATTCC
ACATAAAGAGATTACTCGACGCTTTGCTAGCAGTCATGCAGATCGAATCC
AACATTCCCTATCCCTCTCTGAGCCTGATCAAGTTGCCGCGAACAGAAAC
TGCTCTCGATGtagaaaatggaaagaaCTCGAAAAACCTGACGCTCGTCT
TTGGTGAGAGCCAACGTAAGTCTTATC back to topCoding sequence (CDS) from alignment at CM002456.1:219247..221923+ >rna706 ID=rna706|Name=rna706|organism=Nannochloropsis gaditana|type=CDS|length=5589bp|location=Sequence derived from alignment at CM002456.1:219247..221923+ (Nannochloropsis gaditana) atggcGCTCAGGAAAAGGATCGCAGGCCTGGTGGCGGTCATCACACTTGT CCAGTCCACTTACTCCATCGCCACTGCGTTCCTCCTACCTCACACGACGC GTGTTTCACAGCCCCATAGATCGACAAGTCCAGCTTCCACAACACGGGCG CCCGCTTCCACGCTTCCTGTCGAACAAGTTCGTGGCTCAGATAAGGAAAA GCTTCTGGACCTGTCGGTGTTGGATCGTGCGATGTCAGGCCCCCCTGCAA ATCTGAGGGTGAAGGACACGAGCACCGAGCGACTGCGCGTGGGTATTATA GGTGGAGGTCTCGGTGGACTGATCACAGCGATGGATTTGTCCGAGGCAGG GCACGAGGTTGAGATTTTCGAGGCGCGTCGTTTtgcgggggggaaagtaG GGTCGTgggtggacaaggacggcAACCACATCGAGATGGgacTGCACGTC TTCTTTGGTTGCTACTACAATCTTTTTGGGATCATGAAACGGTTGGGGGT CTTTGAGTCCTCTCTTCGCCTCAAAGATCACACCCATTCCTTCATTAATA AGGGCGGTAGGGTCGGCGAGCTCGATTTTCGCTTCGGCGGCATCGGCGCC CCTGTGAACGGCTTGAAAGCTTttgccaccacctcccaACTGGAAATCGG GGACAAGATTGCCAACGCCGTGGCCTTGGCGACCAGCCCCGTCGTGAAAG CCCTCTTCGACTTCGacgcggccatggaggaTGTCCGGGCCTTGGACGGC ATCTCTTTCTCGGAATGGTTCctgaggaaaggggggagccGGGGCAGCAT GACGCGGATGTGGGACCCGATTGCGTACGCCTTGGGGTTTATCGATTGCG ACCACATCTCGGCCCGGTGCATGCTGACGATCTTCCAGCTTTTTGCCGTG AGGTCGGAGGCCTCGGTATTGCGCATGTGTGAGGGCTCCCCCAACACGTA TCTACACGAACCCATTTTGGCGTATTTGAAAGCGCGGGGGGTGACCTTGC ACCTGAACAGCCGCATTCAGGACTTGGTCTACGACACGGACGCCAGCACA GGGGCACCCTCCCGTGTGAAGGGCCTGGTATTATCAGGGAAAGCCAacac ggaggacgggaaggaggccggggcggcgggcggggttGGGGCCGCGGGCG AGCAACGCTTGTTTGATTGCGTGGTTGCTGCGTGCGACGTGCCTGGGATC CAAAAATTGCTGCCGGAGTCCTTCCGTAAAATCCAGGAGTTCGACAACAT CTACCGCCTAGAAGCCGTTCCCGTCACCACGGTCCAACTCCGATTCAACG GCTGGGTAACGGAACTCAACGACCCCGTGCGGATGAAAGAAATCAATGGG GACTTTTCCAACGGGCGCGCTCCGGGCCTGGACAACCTCCTCTACTCAGC GGACGCGGAATTTTCTTGCTTTGCCGACCTGGCGTTGACCAGCCCGGCGG AATAttacaaggaaggggaagggtcGTTGTTGCAATGCGTCCTGACCCCG GGAGACAAATGGATGCCGGTCTCGACGGAGAAGATCGCGGAGGCCACGTT AAAACAAGTTTTGGATCTGTTCCCGTCGGCGCGTGGCTTGGAGTGCACCT GGACCAACGTGGTGAAGCTCGGCCAGTCCCTCTACCGCGAGGCCCCCGGG ATGGACGTATACCGACCCAAACAGAAGAGTCCCGTGGAGAACTTCTACCT GGCTGGCTCCTATACATATCAGGACTACATTGATTCCATGGAAGGGGCAA CGAAGAGTGGGCTCTTGTGTGCAGATCAGATACTGAGAGACGCCAAGACC ATCAAGGCCAGGGCCAGCTCGAAGGAGGATATGATTAAGGAGGCAGCGGT CATGTCCGCGTGAatggcGCTCAGGAAAAGGATCGCAGGCCTGGTGGCGG TCATCACACTTGTCCAGTCCACTTACTCCATCGCCACTGCGTTCCTCCTA CCTCACACGACGCGTGTTTCACAGCCCCATAGATCGACAAGTCCAGCTTC CACAACACGGGCGCCCGCTTCCACGCTTCCTGTCGAACAAGTTCGTGGCT CAGATAAGGAAAAGCTTCTGGACCTGTCGGTGTTGGATCGTGCGATGTCA GGCCCCCCTGCAAATCTGAGGGTGAAGGACACGAGCACCGAGCGACTGCG CGTGGGTATTATAGGTGGAGGTCTCGGTGGACTGATCACAGCGATGGATT TGTCCGAGGCAGGGCACGAGGTTGAGATTTTCGAGGCGCGTCGTTTtgcg ggggggaaagtaGGGTCGTgggtggacaaggacggcAACCACATCGAGAT GGgacTGCACGTCTTCTTTGGTTGCTACTACAATCTTTTTGGGATCATGA AACGGTTGGGGGTCTTTGAGTCCTCTCTTCGCCTCAAAGATCACACCCAT TCCTTCATTAATAAGGGCGGTAGGGTCGGCGAGCTCGATTTTCGCTTCGG CGGCATCGGCGCCCCTGTGAACGGCTTGAAAGCTTttgccaccacctccc aACTGGAAATCGGGGACAAGATTGCCAACGCCGTGGCCTTGGCGACCAGC CCCGTCGTGAAAGCCCTCTTCGACTTCGacgcggccatggaggaTGTCCG GGCCTTGGACGGCATCTCTTTCTCGGAATGGTTCctgaggaaagggggga gccGGGGCAGCATGACGCGGATGTGGGACCCGATTGCGTACGCCTTGGGG TTTATCGATTGCGACCACATCTCGGCCCGGTGCATGCTGACGATCTTCCA GCTTTTTGCCGTGAGGTCGGAGGCCTCGGTATTGCGCATGTGTGAGGGCT CCCCCAACACGTATCTACACGAACCCATTTTGGCGTATTTGAAAGCGCGG GGGGTGACCTTGCACCTGAACAGCCGCATTCAGGACTTGGTCTACGACAC GGACGCCAGCACAGGGGCACCCTCCCGTGTGAAGGGCCTGGTATTATCAG GGAAAGCCAacacggaggacgggaaggaggccggggcggcgggcggggtt GGGGCCGCGGGCGAGCAACGCTTGTTTGATTGCGTGGTTGCTGCGTGCGA CGTGCCTGGGATCCAAAAATTGCTGCCGGAGTCCTTCCGTAAAATCCAGG AGTTCGACAACATCTACCGCCTAGAAGCCGTTCCCGTCACCACGGTCCAA CTCCGATTCAACGGCTGGGTAACGGAACTCAACGACCCCGTGCGGATGAA AGAAATCAATGGGGACTTTTCCAACGGGCGCGCTCCGGGCCTGGACAACC TCCTCTACTCAGCGGACGCGGAATTTTCTTGCTTTGCCGACCTGGCGTTG ACCAGCCCGGCGGAATAttacaaggaaggggaagggtcGTTGTTGCAATG CGTCCTGACCCCGGGAGACAAATGGATGCCGGTCTCGACGGAGAAGATCG CGGAGGCCACGTTAAAACAAGTTTTGGATCTGTTCCCGTCGGCGCGTGGC TTGGAGTGCACCTGGACCAACGTGGTGAAGCTCGGCCAGTCCCTCTACCG CGAGGCCCCCGGGATGGACGTATACCGACCCAAACAGAAGAGTCCCGTGG AGAACTTCTACCTGGCTGGCTCCTATACATATCAGGACTACATTGATTCC ATGGAAGGGGCAACGAAGAGTGGGCTCTTGTGTGCAGATCAGATACTGAG AGACGCCAAGACCATCAAGGCCAGGGCCAGCTCGAAGGAGGATATGATTA AGGAGGCAGCGGTCATGTCCGCGTGAatggcGCTCAGGAAAAGGATCGCA GGCCTGGTGGCGGTCATCACACTTGTCCAGTCCACTTACTCCATCGCCAC TGCGTTCCTCCTACCTCACACGACGCGTGTTTCACAGCCCCATAGATCGA CAAGTCCAGCTTCCACAACACGGGCGCCCGCTTCCACGCTTCCTGTCGAA CAAGTTCGTGGCTCAGATAAGGAAAAGCTTCTGGACCTGTCGGTGTTGGA TCGTGCGATGTCAGGCCCCCCTGCAAATCTGAGGGTGAAGGACACGAGCA CCGAGCGACTGCGCGTGGGTATTATAGGTGGAGGTCTCGGTGGACTGATC ACAGCGATGGATTTGTCCGAGGCAGGGCACGAGGTTGAGATTTTCGAGGC GCGTCGTTTtgcgggggggaaagtaGGGTCGTgggtggacaaggacggcA ACCACATCGAGATGGgacTGCACGTCTTCTTTGGTTGCTACTACAATCTT TTTGGGATCATGAAACGGTTGGGGGTCTTTGAGTCCTCTCTTCGCCTCAA AGATCACACCCATTCCTTCATTAATAAGGGCGGTAGGGTCGGCGAGCTCG ATTTTCGCTTCGGCGGCATCGGCGCCCCTGTGAACGGCTTGAAAGCTTtt gccaccacctcccaACTGGAAATCGGGGACAAGATTGCCAACGCCGTGGC CTTGGCGACCAGCCCCGTCGTGAAAGCCCTCTTCGACTTCGacgcggcca tggaggaTGTCCGGGCCTTGGACGGCATCTCTTTCTCGGAATGGTTCctg aggaaaggggggagccGGGGCAGCATGACGCGGATGTGGGACCCGATTGC GTACGCCTTGGGGTTTATCGATTGCGACCACATCTCGGCCCGGTGCATGC TGACGATCTTCCAGCTTTTTGCCGTGAGGTCGGAGGCCTCGGTATTGCGC ATGTGTGAGGGCTCCCCCAACACGTATCTACACGAACCCATTTTGGCGTA TTTGAAAGCGCGGGGGGTGACCTTGCACCTGAACAGCCGCATTCAGGACT TGGTCTACGACACGGACGCCAGCACAGGGGCACCCTCCCGTGTGAAGGGC CTGGTATTATCAGGGAAAGCCAacacggaggacgggaaggaggccggggc ggcgggcggggttGGGGCCGCGGGCGAGCAACGCTTGTTTGATTGCGTGG TTGCTGCGTGCGACGTGCCTGGGATCCAAAAATTGCTGCCGGAGTCCTTC CGTAAAATCCAGGAGTTCGACAACATCTACCGCCTAGAAGCCGTTCCCGT CACCACGGTCCAACTCCGATTCAACGGCTGGGTAACGGAACTCAACGACC CCGTGCGGATGAAAGAAATCAATGGGGACTTTTCCAACGGGCGCGCTCCG GGCCTGGACAACCTCCTCTACTCAGCGGACGCGGAATTTTCTTGCTTTGC CGACCTGGCGTTGACCAGCCCGGCGGAATAttacaaggaaggggaagggt cGTTGTTGCAATGCGTCCTGACCCCGGGAGACAAATGGATGCCGGTCTCG ACGGAGAAGATCGCGGAGGCCACGTTAAAACAAGTTTTGGATCTGTTCCC GTCGGCGCGTGGCTTGGAGTGCACCTGGACCAACGTGGTGAAGCTCGGCC AGTCCCTCTACCGCGAGGCCCCCGGGATGGACGTATACCGACCCAAACAG AAGAGTCCCGTGGAGAACTTCTACCTGGCTGGCTCCTATACATATCAGGA CTACATTGATTCCATGGAAGGGGCAACGAAGAGTGGGCTCTTGTGTGCAG ATCAGATACTGAGAGACGCCAAGACCATCAAGGCCAGGGCCAGCTCGAAG GAGGATATGATTAAGGAGGCAGCGGTCATGTCCGCGTGA back to top
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