EWM29966.1, cds706 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|585112567|gb|EWM29966.1| (zeta-carotene desaturase [Nannochloropsis gaditana]) HSP 1 Score: 1280 bits (3311), Expect = 0.000e+0 Identity = 620/620 (100.00%), Postives = 620/620 (100.00%), Query Frame = 0 Query: 1 MALRKRIAGLVAVITLVQSTYSIATAFLLPHTTRVSQPHRSTSPASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA 620 MALRKRIAGLVAVITLVQSTYSIATAFLLPHTTRVSQPHRSTSPASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA Sbjct: 1 MALRKRIAGLVAVITLVQSTYSIATAFLLPHTTRVSQPHRSTSPASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA 620
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|299471703|emb|CBN76924.1| (zeta-carotene desaturase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 785.023 bits (2026), Expect = 0.000e+0 Identity = 383/599 (63.94%), Postives = 467/599 (77.96%), Query Frame = 0 Query: 24 ATAFLL---PHTTRVSQPHRSTSPASTTRAP------ASTLP---VEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSP-AEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKE 609 A+AF++ P TR+ S P+S+ AP A T+ +E+++G+DKE LLD++ +DRA GP +K ++L+VG+IGGGL G+IT+MDL+EAGHEVEIFEAR F GGKVGSW DKDGNHIEMGLHVFFGCYYN FGI +RLG+F+S+LRLKDH H F+ +GG +G LDFR GGIGAP+NGLKAFATT QL I DK+ANA+AL TSP+VKALF+FD AMEDVRALD ++FSEWF KGGSRGS+ R+WDPIAYALGFIDCD+ISARCMLTIFQLFA+RSEASVLRM EGSP+ ++H+PIL YL RGV H + RI D+ ++ DA G P+ V GLV++G +D + + FD V+AA DVPGI+KLLPE+FRK + FDNIY+L+ VPV TVQLRF+GWVTELND + ++ D+S G+APGLDNLLY+ADAEFSCFADLALTSP ++YYK GEGSLLQCV+TPGDKWMP ST+ IA LKQVL+LFPSAR L CTWTNVVKLGQSLYRE PG+D YRP Q++P+ NF++AGSYTYQDYIDSMEGATKS LLCAD++L D + A ++ Sbjct: 20 ASAFVVGVPPSLTRLP----SGPPSSSAVAPRMVAGVAGTVGATGIERIKGTDKEGLLDVNRIDRARKGP----EIKLPEDQKLKVGVIGGGLAGMITSMDLAEAGHEVEIFEARPFMGGKVGSWKDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFDSALRLKDHNHQFLKQGGELGGLDFRMGGIGAPINGLKAFATTGQLGIFDKLANALALGTSPIVKALFNFDWAMEDVRALDSMTFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHHTSRRILDIKHEVDAD-GKPTHVNGLVVTGGGGGKD-------------QQYKEFDLVIAATDVPGIKKLLPENFRKYEMFDNIYKLDGVPVATVQLRFDGWVTELNDKDKRNDVASDYSGGKAPGLDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPRSTDDIAAVCLKQVLELFPSARELNCTWTNVVKLGQSLYREGPGLDQYRPDQRTPIPNFFMAGSYTYQDYIDSMEGATKSALLCADRVLEDTPALAKAAKERK 596
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|873230856|emb|CEM09849.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 760.755 bits (1963), Expect = 0.000e+0 Identity = 380/544 (69.85%), Postives = 437/544 (80.33%), Query Frame = 0 Query: 63 SDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQE-FDNIYRLEAVPVTTVQLRFNGWVTELN--DPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKA 603 +D E LLD+ L+RA +GP L +RL++G++G GL GL+TAMDL++AGH VEI+E R F GGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGI KRLG+FE +LRLK HTH F+NKGG VG LDFR GG+GAP NGLKAFATTSQLE+GDK+ANA+ALATSPVV+ L DFD AMEDVR LD ISFSEWFL KGGSRGS+ RMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRM EGSP+ YLH+PI YL+ARG + +++DL+YDTDAS GAP+R++G+V++G G E + FD VVAA DVPGIQKLLP SF+ + F N+ +LE VPV TVQLRF+GWVTEL+ P R + ++ DFS+G+APGLDNLLYSADAEFSCFADLAL SPA+YYK GEGSLLQCVLTPGDKWMP + IA ATLKQV DLFPSAR L+CTW+NVVKL QSLYREAPGMD +RP QK+PV+ FYLAGSYTYQDYIDSMEGATKSGL A+ IL D + A Sbjct: 3 ADAEGLLDVKRLERAATGPQIFL----PDDQRLKIGVVGAGLAGLVTAMDLADAGHSVEIYETRPFIGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIFKRLGIFEDALRLKTHTHQFVNKGGDVGALDFRMGGVGAPFNGLKAFATTSQLELGDKVANAIALATSPVVRGLVDFDGAMEDVRNLDDISFSEWFLSKGGSRGSIDRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMLEGSPHEYLHKPIQQYLEARGAKIFTRRKVKDLLYDTDAS-GAPTRMRGIVVTGPP------------GRDRQDETKEFDVVVAAVDVPGIQKLLPPSFKSSYDVFGNVDKLEGVPVATVQLRFDGWVTELDPSHPDR-RVVDKDFSDGKAPGLDNLLYSADAEFSCFADLALASPADYYKPGEGSLLQCVLTPGDKWMPQEVDAIANATLKQVYDLFPSARDLKCTWSNVVKLNQSLYREAPGMDPFRPPQKTPVDGFYLAGSYTYQDYIDSMEGATKSGLKAAEAILDDTPALAA 528
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|551667431|ref|XP_005836476.1| (hypothetical protein GUITHDRAFT_93434 [Guillardia theta CCMP2712] >gi|428180629|gb|EKX49496.1| hypothetical protein GUITHDRAFT_93434 [Guillardia theta CCMP2712]) HSP 1 Score: 734.947 bits (1896), Expect = 0.000e+0 Identity = 353/537 (65.74%), Postives = 425/537 (79.14%), Query Frame = 0 Query: 74 LDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSAR--GLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSK 608 + +A GP V+ ++L++GI+G GL G++TAMDL +AGHEVEIFEAR F GGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGI++R+G F+ SLRLK+H H F+N+GG GELDFR GGIGAP NGLKAFATT QL + DK+ NAV L TSP+V+AL DFD M+ VR+LD ISFSEWFLR GGSRGS+ RMWDPIAYALGFIDCD+ISARCMLTIFQLFAVRSEASVLRMCEGSPNT++ PI+ YLK RGV +LNSR++D++++ DA G P+ VKG+ E GG ++ FD VV A DVPGI+KLLPESFRK FD IY+LE VPV TVQLRF+GW+TE+ D MK+IN D S+G+APG+DNLLYSAD EFSCFADLALTSPAEYYKEGEGSLLQCVLTP D++M + E++A T +Q LFPSAR GL+CTW+NVVKL +SLYREAPGMD +RP Q + + NF+L+GSYTYQDYIDSMEGATKSGLLCA+++++ +++ + SK Sbjct: 1 MQKAFQGP----SVRFPEEKKLKIGIVGSGLAGMVTAMDLVDAGHEVEIFEARNFVGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGILQRVGTFDKSLRLKEHRHIFVNEGGWTGELDFRMGGIGAPFNGLKAFATTEQLGLYDKLMNAVRLGTSPIVRALVDFDGGMDMVRSLDDISFSEWFLRLGGSRGSIKRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTFISGPIVDYLKERGVKFNLNSRVEDIMHEVDAQ-GKPTFVKGI------------EVALDGGEPV---KKNFDVVVCAQDVPGIKKLLPESFRKHDMFDRIYKLEGVPVATVQLRFDGWITEMQDKEAMKKINEDLSDGKAPGIDNLLYSADVEFSCFADLALTSPAEYYKEGEGSLLQCVLTPADRFMSMPPEEVARITCEQAYKLFPSAREQGLKCTWSNVVKLRESLYREAPGMDKFRPAQNTVIPNFFLSGSYTYQDYIDSMEGATKSGLLCAEEVIKATESLVSLRDSK 517
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|922860466|gb|KOO28349.1| (zeta-carotene desaturase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0 Identity = 338/559 (60.47%), Postives = 428/559 (76.57%), Query Frame = 0 Query: 68 LLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLR-----KGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFR-KIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA 620 L+ ++ RA SGP S +L++GI+G GL G++ AMDL++AGH+VEIFE R F GGKV SW+DKDGNHIEMGLHVFFGCYYNLFGIM+R G F+ LRLK+HTH+FIN GG +G LDFRF IGAPV+GL+AFA T Q+ + DK+ANA+ L TSP+V+AL DFD M+ VR LD I+F+EWF + KG +RGS+ RMWDPIAYALGFIDCDHISARCMLTIF LFA+R+EASVLRM EGSP TYLH+PIL YL RGV ++L + ++D+V+DTDAS G P+RV+G+V VG E + +DCV+AACD+PGI+K+LPESFR + FDNIY+L+ VP+ TVQ+RF+GWVTE+ D +MK+++GD S+GR G+DNLLYSADAEFSCFAD+ALTSP EYYK+GEGSL+Q V + S E+I +KQ+ DLFPS++ L+CTW++VVKLGQSLYREAPGMD YRP Q +P++NF+LAGSYTYQDYIDSMEGATKSGL+ AD+++ A+ + A+A + + KEAA +A Sbjct: 29 FLNKALSGRAKSGPGV------VSKSKLKIGIVGAGLAGMVAAMDLADAGHDVEIFELRPFVGGKVSSWLDKDGNHIEMGLHVFFGCYYNLFGIMERTGSFDL-LRLKEHTHTFINNGGGIGALDFRFP-IGAPVSGLQAFARTEQIGVSDKLANALRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTQLEGPFKGSARGSIDRMWDPIAYALGFIDCDHISARCMLTIFMLFAIRTEASVLRMLEGSPQTYLHDPILRYLDERGVKVNLRTAVRDIVHDTDAS-GKPTRVRGIV------------------VGGNNELKEYDCVIAACDLPGIKKVLPESFRSSYKFFDNIYKLDCVPIATVQVRFDGWVTEMQDMEKMKDVSGDQSDGRGAGIDNLLYSADAEFSCFADMALTSPGEYYKKGEGSLIQAVFD--SRAFERSEEQIVADCIKQLNDLFPSSKALKCTWSSVVKLGQSLYREAPGMDKYRPTQATPIDNFFLAGSYTYQDYIDSMEGATKSGLMVADEVIARAEELAAQARNAKPR-KEAAGTAA 557
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|397617612|gb|EJK64522.1| (hypothetical protein THAOC_14736 [Thalassiosira oceanica]) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 328/557 (58.89%), Postives = 407/557 (73.07%), Query Frame = 0 Query: 41 STSPASTTRAPASTLPVEQV-RGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFR-KIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQIL 595 ++SP ++ A + E R + L+ ++ RA +GP ++ERL++GI+G GL G++ AMDL++AGH+VE+FE R F GGKV SW D DGNHIEMGLHVFFGCYYNLFGIMKR G F++ LRLK+H H+F+N+GG +G LDF+F IGAPV+GL+AF T QLEI DKI NA+ L TSP+V+ALFDFD M+ VR LD I+F+EWF + GG RGS+ RMWDPIAYALGFIDCDHISARCMLTIF LFA+R+EASVLRM EGSP T LH+PIL YL RGV ++L +DLV+D D G P+RV G+ VG E R FD VV A DVPGI+K+LP+SFR + FDNIY L+ VP+ TVQ+RF+GWVTE+ND RM + GD S+GR G+DNLLYSADAEFSCFADLA+TSP EYYK GEGSL+Q V ++ E+I + + Q+ LFPS+R L+CTW+NVVKLGQSLYRE PG D YRPKQ +P+ NF+LAGSYTYQDY+DSMEGAT+SGL+ AD+I+ Sbjct: 220 ASSPLRSSVAEETDFKSESAKRQIGNDSFLNEDLMARAQNGPGKK------NSERLKIGIVGAGLAGMVAAMDLADAGHDVEMFELRPFVGGKVSSWQDGDGNHIEMGLHVFFGCYYNLFGIMKRTGSFDTELRLKEHIHTFVNEGGHLGALDFQFP-IGAPVSGLQAFFKTEQLEIPDKIDNALRLGTSPIVRALFDFDGGMDMVRDLDDITFTEWFTQLGGKRGSLDRMWDPIAYALGFIDCDHISARCMLTIFMLFAIRTEASVLRMLEGSPQTCLHDPILKYLDDRGVKVNLGMGCRDLVHDVDED-GKPTRVTGI------------------KVGPKNELREFDAVVCALDVPGIKKVLPQSFRDHYKMFDNIYELDTVPIATVQVRFDGWVTEMNDDARMMNVAGDQSDGRGGGIDNLLYSADAEFSCFADLAVTSPGEYYKPGEGSLIQAVFD--ERGFGRPEEQIVQDCIDQLHSLFPSSRKLKCTWSNVVKLGQSLYREKPGQDKYRPKQATPISNFFLAGSYTYQDYLDSMEGATRSGLMVADEII 748
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|1072224596|gb|OEU09346.1| (zeta-carotene desaturase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 337/617 (54.62%), Postives = 436/617 (70.66%), Query Frame = 0 Query: 13 VITLVQSTYSIAT-AFLLPHTTRVSQPHRSTSPAST---TRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILR--------DAKTIKARASSKEDMIKEAAV 617 ++T V +T +I++ + +P +T S RS S +T T A T Q+ G+D L+ ++ RA +GP + E+L++GI+G GL G+I AMDL++AGH+VE+FE R F GGKV SW DKD NHIEMGLHVFFGCYYNLFGIMKR G F+ +LR+KDH H+F+N GG++G LDFRF IGAP++GL AFA T QL I DK NAV L TSP+V+AL DFD M+ VR LD I+F+EWF + GG RGS+ RMWDPIAYALGF+DCD ISAR MLTIF LFA+R+EASVLRM +GSP T LH+PI+ YL+ R V ++L+S ++LV+D D TG P+RV+G+ +GA FD V+ A DVPGI+K+LP+SFR+ FD IY LE VP+ TVQ+RF+GWVTELND RM +I+GD S+GR G+DNLLYSAD EFSCFADLA+TSP EYYKEGEGSL+Q V + S E++ E + Q+ +FPS+ L CTW++VVKLGQSLYREAPG D +RPKQ +P+ NF+LAGSYTYQDY+DSMEGAT+SGL+ AD+++ A ++K +A +K + KE++V Sbjct: 12 LVTAVVATMAISSCSAFMPKSTSRSSAVRSLSDTATDGFTSDGAKT----QI-GNDS--FLNEDLMARAQNGPGV------VNKEKLKIGIVGAGLAGMIAAMDLADAGHQVEMFELRPFVGGKVSSWQDKDDNHIEMGLHVFFGCYYNLFGIMKRTGGFDKNLRIKDHVHTFVNDGGKLGALDFRFP-IGAPISGLAAFAATEQLGIEDKFHNAVRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTQLGGKRGSLDRMWDPIAYALGFLDCDTISARAMLTIFMLFAIRTEASVLRMLDGSPQTGLHDPIIKYLEDRDVKINLSSPCRELVHDLDPETGLPTRVRGI------------------KIGAKNVYHEFDTVICALDVPGIKKVLPKSFRQYDMFDKIYELETVPIATVQVRFDGWVTELNDDARMMDISGDQSDGRGGGIDNLLYSADTEFSCFADLAVTSPGEYYKEGEGSLIQAVFDA--RATKRSQEQLVEDCIAQLHKVFPSSSKLNCTWSSVVKLGQSLYREAPGQDKFRPKQATPISNFFLAGSYTYQDYLDSMEGATRSGLMVADEVIARADGPNGLKAMSVKLQAEAKAE--KESSV 592
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|219109864|ref|XP_002176685.1| (zeta-carotene desaturase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411220|gb|EEC51148.1| zeta-carotene desaturase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 317/547 (57.95%), Postives = 406/547 (74.22%), Query Frame = 0 Query: 65 KEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKA-RASSKED 610 + L+ +++ RA +GP R E L +GI+G GL G++ AMDL++AGH+VE+FE R + GGKV SW+DKDGNHIEMGLHVFFGCYYNLFGIMKR G F+ LR+K+H H+F+N+GG++G LDFRF IGAPV+GL+AFA T QL + DK NAV L TSP+V+AL DFD M+ VR LD I+F+EWF GGSRGS+ RMWD IAYALGF+DCD ISARCMLTIF LFA+R+EASVLRM +GSP T LH+PI+ YL+ R V ++L+S +D+V+D D TG P+RVKG+ VGA E R FD V+AA DVPGI+KLLPESFRK EFD IY L+ VP+ TVQ+RF+GWVTE+ D RM +++GD SNG+ G+DNLLYS D EFSCFADLALTSP +YYK EGSL+Q V ++ S E++ + +KQ+ ++FPS+R L+CTW++VVKLGQSLYRE PG D +RP Q +P+ NF++ GSYTYQDY+DSMEGAT+SGL+ AD+I+ A + +A +KE+ Sbjct: 58 NQSFLNQNLMARARNGPGKKNR------ESLSIGIVGAGLAGMVAAMDLADAGHKVEMFEVRPYVGGKVSSWLDKDGNHIEMGLHVFFGCYYNLFGIMKRTGSFDEKLRIKEHLHTFVNEGGKLGALDFRFP-IGAPVSGLQAFARTEQLGVEDKFHNAVRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTAMGGSRGSLDRMWDAIAYALGFLDCDSISARCMLTIFMLFAIRTEASVLRMLDGSPQTGLHDPIIKYLEDRNVKINLSSPCRDIVHDIDPDTGLPTRVKGI------------------KVGAREEFREFDVVIAATDVPGIKKLLPESFRKYDEFDKIYNLDTVPIATVQVRFDGWVTEMQDEARMMDVSGDQSNGKGAGIDNLLYSVDTEFSCFADLALTSPGDYYKPSEGSLIQAVFD--ERAFTRSNEQLVDDCIKQLHNIFPSSRKLKCTWSSVVKLGQSLYREKPGQDKFRPAQATPISNFFMCGSYTYQDYLDSMEGATRSGLMVADEIIARADGPEGLKAQAKEE 577
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|1210525634|dbj|GAX15703.1| (zeta-carotene desaturase [Fistulifera solaris]) HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0 Identity = 309/528 (58.52%), Postives = 400/528 (75.76%), Query Frame = 0 Query: 68 LLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQIL 595 L+ ++ RA GP + E+L++GI+G GL G++ AMDL++AGH++E+FE R + GGKV SW DKDGNHIEMGLHVFFGCYYNLFGIMKR G F+++LR+K+HTH+F+N GGR+G LDFRF IGAPV+GL+AFA T QL++ DK NA+ LA SP+V+AL DFD M+ VR LD I+F+EWF GG RGS+ RMWD IAYALGF+DCD ISARCMLTIF LFA+R+EASVLRM +GSP T LH+PI+ YL+ R V ++L++ ++D+V+D D TG P+RV+G+ VG + R FD V+AA DVPGI+KLLP +FR+ + FD IY L+ VP+ TVQ+RF+GWVTEL D RM +++GD S+GR G+DNLLYS D EFSCFADLALTSP EYYK GEGSL+Q V ++ S E++ E +KQ+ D+FPS+R L+CTW++VVKLGQSLYRE PG D +RPKQ +P+ NF++AGSYTYQDY+DSMEGAT+SGL+ A++I+ Sbjct: 53 FLNEDLMARAQKGPGKK------NKEKLKIGIVGAGLAGMVAAMDLADAGHDIEMFEVRPYVGGKVSSWKDKDGNHIEMGLHVFFGCYYNLFGIMKRTGSFDTALRIKEHTHTFVNTGGRLGALDFRFP-IGAPVSGLQAFARTEQLDLADKADNALRLAISPIVRALVDFDGGMDMVRELDDITFTEWFTALGGKRGSLDRMWDAIAYALGFLDCDSISARCMLTIFMLFAIRTEASVLRMLDGSPQTGLHDPIIKYLEDRNVKINLSTPVRDVVHDLDPKTGLPTRVRGI------------------KVGPSESFREFDVVIAATDVPGIKKLLPATFRQYEFFDKIYNLDTVPIATVQVRFDGWVTELQDEKRMMDVSGDQSDGRGAGIDNLLYSVDTEFSCFADLALTSPGEYYKPGEGSLIQAVFD--ERAFKRSNEQLVEDCIKQLNDIFPSSRKLKCTWSSVVKLGQSLYREKPGQDKFRPKQATPIPNFFMAGSYTYQDYLDSMEGATRSGLMVANEII 553
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|224009560|ref|XP_002293738.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970410|gb|EED88747.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0 Identity = 332/593 (55.99%), Postives = 424/593 (71.50%), Query Frame = 0 Query: 23 IATAFL----LPHTTRVSQPHRSTS---------------PASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFR-KIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQIL 595 ++TAFL LP T P STS A+T+ ++ +Q G+D L+ +++ RA +GP +V D E+L++G++G GL G++ AMDL++AGH+VE+FE R F GGKV SW DK+GNHIEMGLHVFFGCYYNLFGIMKR G F++ LR+K+H H+F+N+GG +G LDF+F IGAP++GL+AFA T QL DK NA+ L TSP+V+ALFDFD M+ VR LD I+F+EWF + GGSRGS+ RMWDPIAYALGFIDCDHISARCMLTIF LFA+R+EASVLRM EGSP T LH+PIL YL RGV ++ + +++V+D D G P RV G+ VG E + FD VV A DVPGI+K+LP+SFR FDNIY L+ VP+ TVQ+RF+GWVTE+ND VRM +I+GD S+GR G+DNLLYSADAEFSCFADLA+TSP EYYKEGEGSL+Q V ++ S ++I + + Q+ LFPS++ L CTW++VVKLGQSLYRE PG D +RPKQ +P+ NF+LAGSYTYQDY+DSMEGAT+SGL+ AD+I+ Sbjct: 3 LSTAFLVGCVLPATHSFHLPSASTSLRRPVTVATTSSLSMSAATSEGEFTSESAKQQIGNDS--FLNENLMARAQNGPG---KVND---EKLKIGVVGAGLAGMVAAMDLADAGHDVEMFELRPFVGGKVSSWKDKEGNHIEMGLHVFFGCYYNLFGIMKRTGSFDTELRIKEHIHTFVNEGGILGALDFKFP-IGAPISGLQAFARTEQLGWDDKFHNALRLGTSPIVRALFDFDGGMDMVRDLDDITFTEWFTQLGGSRGSLDRMWDPIAYALGFIDCDHISARCMLTIFMLFAIRTEASVLRMLEGSPQTCLHDPILKYLGDRGVKINTSMGCREIVHDVD-ENGKPIRVTGI------------------KVGPKEELKEFDAVVCALDVPGIKKVLPQSFRDHYPMFDNIYNLDTVPIATVQVRFDGWVTEMNDDVRMMDISGDQSDGRGGGIDNLLYSADAEFSCFADLAITSPGEYYKEGEGSLIQAVFD--ERAFDRSNDQIVQDCISQLNSLFPSSKKLNCTWSSVVKLGQSLYREKPGQDKFRPKQATPISNFFLAGSYTYQDYLDSMEGATRSGLMVADEII 565 The following BLAST results are available for this feature:
BLAST of EWM29966.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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