EWM29966.1, cds706 (CDS) Nannochloropsis gaditana

Overview
NameEWM29966.1
Unique Namecds706
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:219374..219812 +
Alignment locationCM002456.1:220005..220846 +
Alignment locationCM002456.1:220994..221575 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29966.1
Productzeta-carotene desaturase
Orig transcript idgnl|cribi|Naga_100200g6.10015.mrna
GeneZDS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:219374..219812 +
CM002456.1supercontigCM002456.1:220005..220846 +
CM002456.1supercontigCM002456.1:220994..221575 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0016117carotenoid biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016719carotene 7,8-desaturase activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR014103Zeta_caro_desat
IPR002937Amino_oxidase
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|585112567|gb|EWM29966.1| (zeta-carotene desaturase [Nannochloropsis gaditana])

HSP 1 Score: 1280 bits (3311), Expect = 0.000e+0
Identity = 620/620 (100.00%), Postives = 620/620 (100.00%), Query Frame = 0
Query:    1 MALRKRIAGLVAVITLVQSTYSIATAFLLPHTTRVSQPHRSTSPASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA 620
            MALRKRIAGLVAVITLVQSTYSIATAFLLPHTTRVSQPHRSTSPASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA
Sbjct:    1 MALRKRIAGLVAVITLVQSTYSIATAFLLPHTTRVSQPHRSTSPASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA 620          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|299471703|emb|CBN76924.1| (zeta-carotene desaturase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 785.023 bits (2026), Expect = 0.000e+0
Identity = 383/599 (63.94%), Postives = 467/599 (77.96%), Query Frame = 0
Query:   24 ATAFLL---PHTTRVSQPHRSTSPASTTRAP------ASTLP---VEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSP-AEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKE 609
            A+AF++   P  TR+     S  P+S+  AP      A T+    +E+++G+DKE LLD++ +DRA  GP     +K    ++L+VG+IGGGL G+IT+MDL+EAGHEVEIFEAR F GGKVGSW DKDGNHIEMGLHVFFGCYYN FGI +RLG+F+S+LRLKDH H F+ +GG +G LDFR GGIGAP+NGLKAFATT QL I DK+ANA+AL TSP+VKALF+FD AMEDVRALD ++FSEWF  KGGSRGS+ R+WDPIAYALGFIDCD+ISARCMLTIFQLFA+RSEASVLRM EGSP+ ++H+PIL YL  RGV  H + RI D+ ++ DA  G P+ V GLV++G    +D              + + FD V+AA DVPGI+KLLPE+FRK + FDNIY+L+ VPV TVQLRF+GWVTELND  +  ++  D+S G+APGLDNLLY+ADAEFSCFADLALTSP ++YYK GEGSLLQCV+TPGDKWMP ST+ IA   LKQVL+LFPSAR L CTWTNVVKLGQSLYRE PG+D YRP Q++P+ NF++AGSYTYQDYIDSMEGATKS LLCAD++L D   +   A  ++
Sbjct:   20 ASAFVVGVPPSLTRLP----SGPPSSSAVAPRMVAGVAGTVGATGIERIKGTDKEGLLDVNRIDRARKGP----EIKLPEDQKLKVGVIGGGLAGMITSMDLAEAGHEVEIFEARPFMGGKVGSWKDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFDSALRLKDHNHQFLKQGGELGGLDFRMGGIGAPINGLKAFATTGQLGIFDKLANALALGTSPIVKALFNFDWAMEDVRALDSMTFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHHTSRRILDIKHEVDAD-GKPTHVNGLVVTGGGGGKD-------------QQYKEFDLVIAATDVPGIKKLLPENFRKYEMFDNIYKLDGVPVATVQLRFDGWVTELNDKDKRNDVASDYSGGKAPGLDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPRSTDDIAAVCLKQVLELFPSARELNCTWTNVVKLGQSLYREGPGLDQYRPDQRTPIPNFFMAGSYTYQDYIDSMEGATKSALLCADRVLEDTPALAKAAKERK 596          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|873230856|emb|CEM09849.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 760.755 bits (1963), Expect = 0.000e+0
Identity = 380/544 (69.85%), Postives = 437/544 (80.33%), Query Frame = 0
Query:   63 SDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQE-FDNIYRLEAVPVTTVQLRFNGWVTELN--DPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKA 603
            +D E LLD+  L+RA +GP   L       +RL++G++G GL GL+TAMDL++AGH VEI+E R F GGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGI KRLG+FE +LRLK HTH F+NKGG VG LDFR GG+GAP NGLKAFATTSQLE+GDK+ANA+ALATSPVV+ L DFD AMEDVR LD ISFSEWFL KGGSRGS+ RMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRM EGSP+ YLH+PI  YL+ARG  +    +++DL+YDTDAS GAP+R++G+V++G              G     E + FD VVAA DVPGIQKLLP SF+   + F N+ +LE VPV TVQLRF+GWVTEL+   P R + ++ DFS+G+APGLDNLLYSADAEFSCFADLAL SPA+YYK GEGSLLQCVLTPGDKWMP   + IA ATLKQV DLFPSAR L+CTW+NVVKL QSLYREAPGMD +RP QK+PV+ FYLAGSYTYQDYIDSMEGATKSGL  A+ IL D   + A
Sbjct:    3 ADAEGLLDVKRLERAATGPQIFL----PDDQRLKIGVVGAGLAGLVTAMDLADAGHSVEIYETRPFIGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIFKRLGIFEDALRLKTHTHQFVNKGGDVGALDFRMGGVGAPFNGLKAFATTSQLELGDKVANAIALATSPVVRGLVDFDGAMEDVRNLDDISFSEWFLSKGGSRGSIDRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMLEGSPHEYLHKPIQQYLEARGAKIFTRRKVKDLLYDTDAS-GAPTRMRGIVVTGPP------------GRDRQDETKEFDVVVAAVDVPGIQKLLPPSFKSSYDVFGNVDKLEGVPVATVQLRFDGWVTELDPSHPDR-RVVDKDFSDGKAPGLDNLLYSADAEFSCFADLALASPADYYKPGEGSLLQCVLTPGDKWMPQEVDAIANATLKQVYDLFPSARDLKCTWSNVVKLNQSLYREAPGMDPFRPPQKTPVDGFYLAGSYTYQDYIDSMEGATKSGLKAAEAILDDTPALAA 528          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|551667431|ref|XP_005836476.1| (hypothetical protein GUITHDRAFT_93434 [Guillardia theta CCMP2712] >gi|428180629|gb|EKX49496.1| hypothetical protein GUITHDRAFT_93434 [Guillardia theta CCMP2712])

HSP 1 Score: 734.947 bits (1896), Expect = 0.000e+0
Identity = 353/537 (65.74%), Postives = 425/537 (79.14%), Query Frame = 0
Query:   74 LDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSAR--GLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSK 608
            + +A  GP     V+    ++L++GI+G GL G++TAMDL +AGHEVEIFEAR F GGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGI++R+G F+ SLRLK+H H F+N+GG  GELDFR GGIGAP NGLKAFATT QL + DK+ NAV L TSP+V+AL DFD  M+ VR+LD ISFSEWFLR GGSRGS+ RMWDPIAYALGFIDCD+ISARCMLTIFQLFAVRSEASVLRMCEGSPNT++  PI+ YLK RGV  +LNSR++D++++ DA  G P+ VKG+            E    GG      ++ FD VV A DVPGI+KLLPESFRK   FD IY+LE VPV TVQLRF+GW+TE+ D   MK+IN D S+G+APG+DNLLYSAD EFSCFADLALTSPAEYYKEGEGSLLQCVLTP D++M +  E++A  T +Q   LFPSAR  GL+CTW+NVVKL +SLYREAPGMD +RP Q + + NF+L+GSYTYQDYIDSMEGATKSGLLCA+++++  +++ +   SK
Sbjct:    1 MQKAFQGP----SVRFPEEKKLKIGIVGSGLAGMVTAMDLVDAGHEVEIFEARNFVGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGILQRVGTFDKSLRLKEHRHIFVNEGGWTGELDFRMGGIGAPFNGLKAFATTEQLGLYDKLMNAVRLGTSPIVRALVDFDGGMDMVRSLDDISFSEWFLRLGGSRGSIKRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTFISGPIVDYLKERGVKFNLNSRVEDIMHEVDAQ-GKPTFVKGI------------EVALDGGEPV---KKNFDVVVCAQDVPGIKKLLPESFRKHDMFDRIYKLEGVPVATVQLRFDGWITEMQDKEAMKKINEDLSDGKAPGIDNLLYSADVEFSCFADLALTSPAEYYKEGEGSLLQCVLTPADRFMSMPPEEVARITCEQAYKLFPSAREQGLKCTWSNVVKLRESLYREAPGMDKFRPAQNTVIPNFFLSGSYTYQDYIDSMEGATKSGLLCAEEVIKATESLVSLRDSK 517          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|922860466|gb|KOO28349.1| (zeta-carotene desaturase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0
Identity = 338/559 (60.47%), Postives = 428/559 (76.57%), Query Frame = 0
Query:   68 LLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLR-----KGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFR-KIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEAAVMSA 620
             L+ ++  RA SGP         S  +L++GI+G GL G++ AMDL++AGH+VEIFE R F GGKV SW+DKDGNHIEMGLHVFFGCYYNLFGIM+R G F+  LRLK+HTH+FIN GG +G LDFRF  IGAPV+GL+AFA T Q+ + DK+ANA+ L TSP+V+AL DFD  M+ VR LD I+F+EWF +     KG +RGS+ RMWDPIAYALGFIDCDHISARCMLTIF LFA+R+EASVLRM EGSP TYLH+PIL YL  RGV ++L + ++D+V+DTDAS G P+RV+G+V                  VG   E + +DCV+AACD+PGI+K+LPESFR   + FDNIY+L+ VP+ TVQ+RF+GWVTE+ D  +MK+++GD S+GR  G+DNLLYSADAEFSCFAD+ALTSP EYYK+GEGSL+Q V     +    S E+I    +KQ+ DLFPS++ L+CTW++VVKLGQSLYREAPGMD YRP Q +P++NF+LAGSYTYQDYIDSMEGATKSGL+ AD+++  A+ + A+A + +   KEAA  +A
Sbjct:   29 FLNKALSGRAKSGPGV------VSKSKLKIGIVGAGLAGMVAAMDLADAGHDVEIFELRPFVGGKVSSWLDKDGNHIEMGLHVFFGCYYNLFGIMERTGSFDL-LRLKEHTHTFINNGGGIGALDFRFP-IGAPVSGLQAFARTEQIGVSDKLANALRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTQLEGPFKGSARGSIDRMWDPIAYALGFIDCDHISARCMLTIFMLFAIRTEASVLRMLEGSPQTYLHDPILRYLDERGVKVNLRTAVRDIVHDTDAS-GKPTRVRGIV------------------VGGNNELKEYDCVIAACDLPGIKKVLPESFRSSYKFFDNIYKLDCVPIATVQVRFDGWVTEMQDMEKMKDVSGDQSDGRGAGIDNLLYSADAEFSCFADMALTSPGEYYKKGEGSLIQAVFD--SRAFERSEEQIVADCIKQLNDLFPSSKALKCTWSSVVKLGQSLYREAPGMDKYRPTQATPIDNFFLAGSYTYQDYIDSMEGATKSGLMVADEVIARAEELAAQARNAKPR-KEAAGTAA 557          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|397617612|gb|EJK64522.1| (hypothetical protein THAOC_14736 [Thalassiosira oceanica])

HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0
Identity = 328/557 (58.89%), Postives = 407/557 (73.07%), Query Frame = 0
Query:   41 STSPASTTRAPASTLPVEQV-RGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFR-KIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQIL 595
            ++SP  ++ A  +    E   R    +  L+  ++ RA +GP         ++ERL++GI+G GL G++ AMDL++AGH+VE+FE R F GGKV SW D DGNHIEMGLHVFFGCYYNLFGIMKR G F++ LRLK+H H+F+N+GG +G LDF+F  IGAPV+GL+AF  T QLEI DKI NA+ L TSP+V+ALFDFD  M+ VR LD I+F+EWF + GG RGS+ RMWDPIAYALGFIDCDHISARCMLTIF LFA+R+EASVLRM EGSP T LH+PIL YL  RGV ++L    +DLV+D D   G P+RV G+                   VG   E R FD VV A DVPGI+K+LP+SFR   + FDNIY L+ VP+ TVQ+RF+GWVTE+ND  RM  + GD S+GR  G+DNLLYSADAEFSCFADLA+TSP EYYK GEGSL+Q V    ++      E+I +  + Q+  LFPS+R L+CTW+NVVKLGQSLYRE PG D YRPKQ +P+ NF+LAGSYTYQDY+DSMEGAT+SGL+ AD+I+
Sbjct:  220 ASSPLRSSVAEETDFKSESAKRQIGNDSFLNEDLMARAQNGPGKK------NSERLKIGIVGAGLAGMVAAMDLADAGHDVEMFELRPFVGGKVSSWQDGDGNHIEMGLHVFFGCYYNLFGIMKRTGSFDTELRLKEHIHTFVNEGGHLGALDFQFP-IGAPVSGLQAFFKTEQLEIPDKIDNALRLGTSPIVRALFDFDGGMDMVRDLDDITFTEWFTQLGGKRGSLDRMWDPIAYALGFIDCDHISARCMLTIFMLFAIRTEASVLRMLEGSPQTCLHDPILKYLDDRGVKVNLGMGCRDLVHDVDED-GKPTRVTGI------------------KVGPKNELREFDAVVCALDVPGIKKVLPQSFRDHYKMFDNIYELDTVPIATVQVRFDGWVTEMNDDARMMNVAGDQSDGRGGGIDNLLYSADAEFSCFADLAVTSPGEYYKPGEGSLIQAVFD--ERGFGRPEEQIVQDCIDQLHSLFPSSRKLKCTWSNVVKLGQSLYREKPGQDKYRPKQATPISNFFLAGSYTYQDYLDSMEGATRSGLMVADEII 748          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|1072224596|gb|OEU09346.1| (zeta-carotene desaturase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0
Identity = 337/617 (54.62%), Postives = 436/617 (70.66%), Query Frame = 0
Query:   13 VITLVQSTYSIAT-AFLLPHTTRVSQPHRSTSPAST---TRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILR--------DAKTIKARASSKEDMIKEAAV 617
            ++T V +T +I++ +  +P +T  S   RS S  +T   T   A T    Q+ G+D    L+  ++ RA +GP         + E+L++GI+G GL G+I AMDL++AGH+VE+FE R F GGKV SW DKD NHIEMGLHVFFGCYYNLFGIMKR G F+ +LR+KDH H+F+N GG++G LDFRF  IGAP++GL AFA T QL I DK  NAV L TSP+V+AL DFD  M+ VR LD I+F+EWF + GG RGS+ RMWDPIAYALGF+DCD ISAR MLTIF LFA+R+EASVLRM +GSP T LH+PI+ YL+ R V ++L+S  ++LV+D D  TG P+RV+G+                   +GA      FD V+ A DVPGI+K+LP+SFR+   FD IY LE VP+ TVQ+RF+GWVTELND  RM +I+GD S+GR  G+DNLLYSAD EFSCFADLA+TSP EYYKEGEGSL+Q V     +    S E++ E  + Q+  +FPS+  L CTW++VVKLGQSLYREAPG D +RPKQ +P+ NF+LAGSYTYQDY+DSMEGAT+SGL+ AD+++          A ++K +A +K +  KE++V
Sbjct:   12 LVTAVVATMAISSCSAFMPKSTSRSSAVRSLSDTATDGFTSDGAKT----QI-GNDS--FLNEDLMARAQNGPGV------VNKEKLKIGIVGAGLAGMIAAMDLADAGHQVEMFELRPFVGGKVSSWQDKDDNHIEMGLHVFFGCYYNLFGIMKRTGGFDKNLRIKDHVHTFVNDGGKLGALDFRFP-IGAPISGLAAFAATEQLGIEDKFHNAVRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTQLGGKRGSLDRMWDPIAYALGFLDCDTISARAMLTIFMLFAIRTEASVLRMLDGSPQTGLHDPIIKYLEDRDVKINLSSPCRELVHDLDPETGLPTRVRGI------------------KIGAKNVYHEFDTVICALDVPGIKKVLPKSFRQYDMFDKIYELETVPIATVQVRFDGWVTELNDDARMMDISGDQSDGRGGGIDNLLYSADTEFSCFADLAVTSPGEYYKEGEGSLIQAVFDA--RATKRSQEQLVEDCIAQLHKVFPSSSKLNCTWSSVVKLGQSLYREAPGQDKFRPKQATPISNFFLAGSYTYQDYLDSMEGATRSGLMVADEVIARADGPNGLKAMSVKLQAEAKAE--KESSV 592          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|219109864|ref|XP_002176685.1| (zeta-carotene desaturase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411220|gb|EEC51148.1| zeta-carotene desaturase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0
Identity = 317/547 (57.95%), Postives = 406/547 (74.22%), Query Frame = 0
Query:   65 KEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKA-RASSKED 610
             +  L+ +++ RA +GP    R      E L +GI+G GL G++ AMDL++AGH+VE+FE R + GGKV SW+DKDGNHIEMGLHVFFGCYYNLFGIMKR G F+  LR+K+H H+F+N+GG++G LDFRF  IGAPV+GL+AFA T QL + DK  NAV L TSP+V+AL DFD  M+ VR LD I+F+EWF   GGSRGS+ RMWD IAYALGF+DCD ISARCMLTIF LFA+R+EASVLRM +GSP T LH+PI+ YL+ R V ++L+S  +D+V+D D  TG P+RVKG+                   VGA  E R FD V+AA DVPGI+KLLPESFRK  EFD IY L+ VP+ TVQ+RF+GWVTE+ D  RM +++GD SNG+  G+DNLLYS D EFSCFADLALTSP +YYK  EGSL+Q V    ++    S E++ +  +KQ+ ++FPS+R L+CTW++VVKLGQSLYRE PG D +RP Q +P+ NF++ GSYTYQDY+DSMEGAT+SGL+ AD+I+  A   +  +A +KE+
Sbjct:   58 NQSFLNQNLMARARNGPGKKNR------ESLSIGIVGAGLAGMVAAMDLADAGHKVEMFEVRPYVGGKVSSWLDKDGNHIEMGLHVFFGCYYNLFGIMKRTGSFDEKLRIKEHLHTFVNEGGKLGALDFRFP-IGAPVSGLQAFARTEQLGVEDKFHNAVRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTAMGGSRGSLDRMWDAIAYALGFLDCDSISARCMLTIFMLFAIRTEASVLRMLDGSPQTGLHDPIIKYLEDRNVKINLSSPCRDIVHDIDPDTGLPTRVKGI------------------KVGAREEFREFDVVIAATDVPGIKKLLPESFRKYDEFDKIYNLDTVPIATVQVRFDGWVTEMQDEARMMDVSGDQSNGKGAGIDNLLYSVDTEFSCFADLALTSPGDYYKPSEGSLIQAVFD--ERAFTRSNEQLVDDCIKQLHNIFPSSRKLKCTWSSVVKLGQSLYREKPGQDKFRPAQATPISNFFMCGSYTYQDYLDSMEGATRSGLMVADEIIARADGPEGLKAQAKEE 577          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|1210525634|dbj|GAX15703.1| (zeta-carotene desaturase [Fistulifera solaris])

HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0
Identity = 309/528 (58.52%), Postives = 400/528 (75.76%), Query Frame = 0
Query:   68 LLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQIL 595
             L+  ++ RA  GP         + E+L++GI+G GL G++ AMDL++AGH++E+FE R + GGKV SW DKDGNHIEMGLHVFFGCYYNLFGIMKR G F+++LR+K+HTH+F+N GGR+G LDFRF  IGAPV+GL+AFA T QL++ DK  NA+ LA SP+V+AL DFD  M+ VR LD I+F+EWF   GG RGS+ RMWD IAYALGF+DCD ISARCMLTIF LFA+R+EASVLRM +GSP T LH+PI+ YL+ R V ++L++ ++D+V+D D  TG P+RV+G+                   VG +   R FD V+AA DVPGI+KLLP +FR+ + FD IY L+ VP+ TVQ+RF+GWVTEL D  RM +++GD S+GR  G+DNLLYS D EFSCFADLALTSP EYYK GEGSL+Q V    ++    S E++ E  +KQ+ D+FPS+R L+CTW++VVKLGQSLYRE PG D +RPKQ +P+ NF++AGSYTYQDY+DSMEGAT+SGL+ A++I+
Sbjct:   53 FLNEDLMARAQKGPGKK------NKEKLKIGIVGAGLAGMVAAMDLADAGHDIEMFEVRPYVGGKVSSWKDKDGNHIEMGLHVFFGCYYNLFGIMKRTGSFDTALRIKEHTHTFVNTGGRLGALDFRFP-IGAPVSGLQAFARTEQLDLADKADNALRLAISPIVRALVDFDGGMDMVRELDDITFTEWFTALGGKRGSLDRMWDAIAYALGFLDCDSISARCMLTIFMLFAIRTEASVLRMLDGSPQTGLHDPIIKYLEDRNVKINLSTPVRDVVHDLDPKTGLPTRVRGI------------------KVGPSESFREFDVVIAATDVPGIKKLLPATFRQYEFFDKIYNLDTVPIATVQVRFDGWVTELQDEKRMMDVSGDQSDGRGAGIDNLLYSVDTEFSCFADLALTSPGEYYKPGEGSLIQAVFD--ERAFKRSNEQLVEDCIKQLNDIFPSSRKLKCTWSSVVKLGQSLYREKPGQDKFRPKQATPIPNFFMAGSYTYQDYLDSMEGATRSGLMVANEII 553          
BLAST of EWM29966.1 vs. NCBI_GenBank
Match: gi|224009560|ref|XP_002293738.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970410|gb|EED88747.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 332/593 (55.99%), Postives = 424/593 (71.50%), Query Frame = 0
Query:   23 IATAFL----LPHTTRVSQPHRSTS---------------PASTTRAPASTLPVEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSGKANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFR-KIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAEYYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQIL 595
            ++TAFL    LP T     P  STS                A+T+    ++   +Q  G+D    L+ +++ RA +GP    +V D   E+L++G++G GL G++ AMDL++AGH+VE+FE R F GGKV SW DK+GNHIEMGLHVFFGCYYNLFGIMKR G F++ LR+K+H H+F+N+GG +G LDF+F  IGAP++GL+AFA T QL   DK  NA+ L TSP+V+ALFDFD  M+ VR LD I+F+EWF + GGSRGS+ RMWDPIAYALGFIDCDHISARCMLTIF LFA+R+EASVLRM EGSP T LH+PIL YL  RGV ++ +   +++V+D D   G P RV G+                   VG   E + FD VV A DVPGI+K+LP+SFR     FDNIY L+ VP+ TVQ+RF+GWVTE+ND VRM +I+GD S+GR  G+DNLLYSADAEFSCFADLA+TSP EYYKEGEGSL+Q V    ++    S ++I +  + Q+  LFPS++ L CTW++VVKLGQSLYRE PG D +RPKQ +P+ NF+LAGSYTYQDY+DSMEGAT+SGL+ AD+I+
Sbjct:    3 LSTAFLVGCVLPATHSFHLPSASTSLRRPVTVATTSSLSMSAATSEGEFTSESAKQQIGNDS--FLNENLMARAQNGPG---KVND---EKLKIGVVGAGLAGMVAAMDLADAGHDVEMFELRPFVGGKVSSWKDKEGNHIEMGLHVFFGCYYNLFGIMKRTGSFDTELRIKEHIHTFVNEGGILGALDFKFP-IGAPISGLQAFARTEQLGWDDKFHNALRLGTSPIVRALFDFDGGMDMVRDLDDITFTEWFTQLGGSRGSLDRMWDPIAYALGFIDCDHISARCMLTIFMLFAIRTEASVLRMLEGSPQTCLHDPILKYLGDRGVKINTSMGCREIVHDVD-ENGKPIRVTGI------------------KVGPKEELKEFDAVVCALDVPGIKKVLPQSFRDHYPMFDNIYNLDTVPIATVQVRFDGWVTEMNDDVRMMDISGDQSDGRGGGIDNLLYSADAEFSCFADLAITSPGEYYKEGEGSLIQAVFD--ERAFDRSNDQIVQDCISQLNSLFPSSKKLNCTWSSVVKLGQSLYREKPGQDKFRPKQATPISNFFLAGSYTYQDYLDSMEGATRSGLMVADEII 565          
The following BLAST results are available for this feature:
BLAST of EWM29966.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112567|gb|EWM29966.1|0.000e+0100.00zeta-carotene desaturase [Nannochloropsis gaditana... [more]
gi|299471703|emb|CBN76924.1|0.000e+063.94zeta-carotene desaturase, chloroplast precursor [E... [more]
gi|873230856|emb|CEM09849.1|0.000e+069.85unnamed protein product [Vitrella brassicaformis C... [more]
gi|551667431|ref|XP_005836476.1|0.000e+065.74hypothetical protein GUITHDRAFT_93434 [Guillardia ... [more]
gi|922860466|gb|KOO28349.1|0.000e+060.47zeta-carotene desaturase [Chrysochromulina sp. CCM... [more]
gi|397617612|gb|EJK64522.1|0.000e+058.89hypothetical protein THAOC_14736 [Thalassiosira oc... [more]
gi|1072224596|gb|OEU09346.1|0.000e+054.62zeta-carotene desaturase [Fragilariopsis cylindrus... [more]
gi|219109864|ref|XP_002176685.1|0.000e+057.95zeta-carotene desaturase [Phaeodactylum tricornutu... [more]
gi|1210525634|dbj|GAX15703.1|0.000e+058.52zeta-carotene desaturase [Fistulifera solaris][more]
gi|224009560|ref|XP_002293738.1|0.000e+055.99predicted protein [Thalassiosira pseudonana CCMP13... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna706rna706Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications