rna7054, rna7054 (mRNA) Nannochloropsis gaditana

Overview
Namerna7054
Unique Namerna7054
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1164
Alignment locationCM002470.1:330519..331728 -

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Properties
Property NameValue
Producttp53rk-binding protein
Orig transcript idgnl|cribi|Naga_100165g7.9688.mrna
Orig protein idgnl|cribi|Naga_100165g7.9688
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:330519..331728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100165g7gene6820Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7054rna7054-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23636.1cds7037Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7054 ID=rna7054|Name=rna7054|organism=Nannochloropsis gaditana|type=mRNA|length=1164bp
ATGCCTATTCTACGCTCACGCAGGGATGACAGCCGAACAATGGGTAGTGT
CGTGCAAAGGTGTCTGGTTTTGATTTTTGTAGTCAGACAAGTACAAGTCG
TGAAGTGGAGCAAGGCGGGAACAGTAAGCAGAAGAGCCGAGGACAGGGGG
AGTATTGCAATGCATCTTCATACCAAATATGATTCGATCTTTGCCACTTC
CATCTACAGAAAAAATCCAGCGGTATATCTCCTTCAGCCCTTTCATAGCA
CCACCACCTCAACAATGCGTATTCTGGTTGGCGTGAAGCGTGTGATTGAC
TATGCTGTCAAAGTGCGCGTTGCAGCGGACAAGAAAGGGGTGGAACTCAA
CAACGTCAAGCATTCCATGAATCCCTTTTGCGAGATCGCCGTGGAGGAAG
CGGTGCGCCTGAAAGAAAAGAAATTTGCCACGGAGATCGTCGCCGTCTCG
GTAGGGACTAAGCAGGCACAGGAGACCCTCAGAACTGCCTTGGCAATGGG
CGTGGACCGAGGTATCCATGTGGAGACAGCTTTGCGGGCCGACCAGGAAC
TCCAACCCTTGGCTGTAGCGAAGATGCTGGCAAAATTGGTGGACAAGGAG
AAAGCAGGGCTGGTCATCTTAGGGAAGCAGTCCATCGACGGGGACAACGC
TCAGACTGCTCCCATGCTGGCTGCCCTCTTGGGCTGGCCTCAAGCGACTT
TCGCTGCGGGGGTAGAGCCTGTGGATGAGAATAAGGCGTTGAAGGTGGAG
CGGGAAACAGACACGGGCTCTGAGGTACTGAAAGTCAACCTGCCGGCCGT
CCTCTCCACGGACCTGCGCCTGAACACGCCCCGGTATGCGACCATACCCA
ACATCATGAAGGCGAAGAAGAAGCCGATGGAGTTGCTGAGCCCTGAGAAG
CTGGGAGTGGACGTGACGCCCAAGACCTCGGTGATATCCGTGGCGGAGCC
CGGTAAACGGAAAGCAGGGATCATGGTTGAGAGCGTCGACGAGCTGTTGG
ACAAGCTGAAGAACGAGGCTAAGTACAGAGGGTACGACCAAAGATTATAT
CCTGGAAAGCGCGTTGGAAAACATGTGTGCGTAGGCTTCATGCGGAGATG
TGAAAAGGAAAGGAAGATCTGGAGTGAAGGAAGGGAAAGAGGCCCTGGCG
GCGTGGTGGAATAG
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protein sequence of rna7054

>rna7054-protein ID=rna7054-protein|Name=rna7054|organism=Nannochloropsis gaditana|type=polypeptide|length=178bp
MISWDASRAAPVEVSASGNKDLGSSNEANGNHSESFVFKTTLFPEKHTLC
LLLFQDVKNASAVRETLLAGNSPDFALINPDMIFSSFHLLLAASIALLHA
NQGTMRVKTLHAELLYSLSPTTSISEAFRIFGGGGGGPDKDGSTALSLHR
YARPRDYHTSLPTRARASGPGGASLVMP
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mRNA from alignment at CM002470.1:330519..331728-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7054 ID=rna7054|Name=rna7054|organism=Nannochloropsis gaditana|type=mRNA|length=1210bp|location=Sequence derived from alignment at CM002470.1:330519..331728- (Nannochloropsis gaditana)
CAACAATACCAGATTTAAGCAAGTGATTGCCGTCATTCACAACCCTATAA
AAAGTGTACAGCCCCTTGTCGTACTTTAAAACCTCAGCGTACCTTAACAT
GGCCCAATTTGATTTTTTATCTTACCTTTTATGTCAGTGTCATTGTATTT
GGGCCAGGAAAGAGCGCGGCCTCAGCCGGTGAGCTCAAAACACTATGATA
TCTTGGGACGCCTCTCGGGCAGCGCCAGTGGAGGTATCAGCTTCAGGAAA
CAAGGATTTAGGATCCAGCAATGAAGCGAATGGAAACCATAGCGAATCTT
TTGTCTTCAAGACTACACTGTTCCCTGAAAAGCACACGGTAAGGAATATT
GGAACACTTCTAAAAGAAGCGATTGCTGCACCCGGGTAGCTGTCAGAGAG
CAGATATAGGACATGAACGTAGGTGCAAAGGCGGGAATGTTGCACGTCTG
AGTCCTTAGTCCTAATAATTGCAATTTGACCCACTTTTAAATGACAGCTC
TGCCTCCTCCTCTTCCAAGATGTCAAGAACGCGAGTGCCGTCCGTGAGAC
CTTGCTTGCAGGCAACAGTCCCGACTTCGCACTCATCAACCCGGACATGA
TCTTCTCGTCCTTCCACCTGCTTCTAGCGGCTTCTATCGCCCTTCTTCAT
GCCAATCAAGGCACAATGCGGGTCAAGACTTTGCACGCTGAGCTTCTCTA
CTCGTTGTCCCCCACCACGAGCATTTCCGAGGCCTTTCGGATCTTCGGCG
GGGGGGGGGGCGGCCCCGACAAAGACGGATCGACTGCTCTTAGCCTTCAT
CGATACGCCCGCCCCCGTGATTACCACACAAGTCTTCCCACTCGTGCAAG
GGCGAGCGGTCCCGGCGGAGCGAGTCTTGTCATGCCTTGACGCGCGGCCC
ATGCCTGTGGAGAGAGCCGCCGCTTTCCGGAAGGTGTTCAAGGTTGTGGG
GGGGGGGATAAAGGACAGGAGCGACAAAGAGACAAGGGGGGAGGGCGTGA
AGGAGAAAAGGAGGAGACGGAGCTGGAGCATGCTATCATCTCCCAGGTTG
CGGCCAAGCGTGTATTGTAAAGGGGTCAAGCATCATTGGAAAGCAATATA
TGCCAGCATCTGTTTATATCTCGAGCTTCTCGCGATCACAAAAAGAAAAT
TGAACGTGAGGACACACGTACAAAATTAAGATCAGAAAAGAAAATGCACG
GGATATTATC
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Coding sequence (CDS) from alignment at CM002470.1:330519..331728-

>rna7054 ID=rna7054|Name=rna7054|organism=Nannochloropsis gaditana|type=CDS|length=1074bp|location=Sequence derived from alignment at CM002470.1:330519..331728- (Nannochloropsis gaditana)
CTCTGCCTCCTCCTCTTCCAAGATGTCAAGAACGCGAGTGCCGTCCGTGA
GACCTTGCTTGCAGGCAACAGTCCCGACTTCGCACTCATCAACCCGGACA
TGATCTTCTCGTCCTTCCACCTGCTTCTAGCGGCTTCTATCGCCCTTCTT
CATGCCAATCAAGGCACAATGCGGGTCAAGACTTTGCACGCTGAGCTTCT
CTACTCGTTGTCCCCCACCACGAGCATTTCCGAGGCCTTTCGGATCTTCG
GCGGGGGGGGGGGCGGCCCCGACAAAGACGGATCGACTGCTCTTAGCCTT
CATCGATACGCCCGCCCCCGTGATTACCACACAAGTCTTCCCACTCGTGC
AAGGGCGAGCGGTCCCGGCGGAGCGAGTCTTGTCATGCCTTGAATGATAT
CTTGGGACGCCTCTCGGGCAGCGCCAGTGGAGGTATCAGCTTCAGGAAAC
AAGGATTTAGGATCCAGCAATGAAGCGAATGGAAACCATAGCGAATCTTT
TGTCTTCAAGACTACACTGTTCCCTGAAAAGCACACGCTCTGCCTCCTCC
TCTTCCAAGATGTCAAGAACGCGAGTGCCGTCCGTGAGACCTTGCTTGCA
GGCAACAGTCCCGACTTCGCACTCATCAACCCGGACATGATCTTCTCGTC
CTTCCACCTGCTTCTAGCGGCTTCTATCGCCCTTCTTCATGCCAATCAAG
GCACAATGCGGGTCAAGACTTTGCACGCTGAGCTTCTCTACTCGTTGTCC
CCCACCACGAGCATTTCCGAGGCCTTTCGGATCTTCGGCGGGGGGGGGGG
CGGCCCCGACAAAGACGGATCGACTGCTCTTAGCCTTCATCGATACGCCC
GCCCCCGTGATTACCACACAAGTCTTCCCACTCGTGCAAGGGCGAGCGGT
CCCGGCGGAGCGAGTCTTGTCATGCCTTGAATGATATCTTGGGACGCCTC
TCGGGCAGCGCCAGTGGAGGTATCAGCTTCAGGAAACAAGGATTTAGGAT
CCAGCAATGAAGCGAATGGAAACCATAGCGAATCTTTTGTCTTCAAGACT
ACACTGTTCCCTGAAAAGCACACG
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Synonyms
Publications