rna7051, rna7051 (mRNA) Nannochloropsis gaditana

Overview
Namerna7051
Unique Namerna7051
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length237
Alignment locationCM002470.1:324512..326276 -

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Properties
Property NameValue
ProductCRAL-TRIO domain protein
Orig transcript idgnl|cribi|Naga_100165g10.9685.mrna
Orig protein idgnl|cribi|Naga_100165g10.9685
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:324512..326276 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100165g10gene6817Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7051rna7051-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23633.1cds7034Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7051 ID=rna7051|Name=rna7051|organism=Nannochloropsis gaditana|type=mRNA|length=237bp
ATGCTCGACAGCGATGTATGGGGTCCTCTCGGAGTGAAACCGCAGGCCTC
CCTTGACGTCGCCGTGCGCGTCACTTCCACCCCCAGACTCCCAGCTCTCC
GGCAGAGGGCCTCCCTTGCGTCTCGCGACCAACTTTGGAGAGAAGACAGC
AGCCTCAAGAGGTCTTCTAACCTCTTAAGAAATTTCATGCCGACTGCGAA
AAGCCAAGGCGGCCGCTCCTTGATGAGACGGCTGTGA
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protein sequence of rna7051

>rna7051-protein ID=rna7051-protein|Name=rna7051|organism=Nannochloropsis gaditana|type=polypeptide|length=241bp
MVLEFLTPRKWDILTPKAKDTQEALRIELEKMTAHFPAAKEKDLKRFLMG
FHTKADKAIPAYEAHLHWRAQNLPIAKESCLKELQKGRFYFHGMDLEGRP
VAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNT
GIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDE
RRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDPDNA
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mRNA from alignment at CM002470.1:324512..326276-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7051 ID=rna7051|Name=rna7051|organism=Nannochloropsis gaditana|type=mRNA|length=1765bp|location=Sequence derived from alignment at CM002470.1:324512..326276- (Nannochloropsis gaditana)
TGAGGTCGAGGACCTTCGCTGTGATGTCTCCACTGGCTTGCGAGGCTCCA
GTGAACGGCATGACTCCCGAGTGTGGATATATAAATAAGGCGTCTTGGCG
TTCGGGCCGTATATAAAGCTGGGGACTCTTCCTATCGCACACTCACAGGG
TGGTTTCTGGCTGAATTGGCTAGAGTGTTAAATGATTTTGATCTTTTCTA
AGACCAGCATTAAAAGTCTGAGTCCAGCTCTCCAGGATGTTCTTACTTCT
CTGTTTCGTCATGCGCTCGTGGCCACAGCCTCTTGTTTGTTGGCATGTCA
GCAAGGAATAACTACAAACCTCACTTATTCATTTATCTTCCATATCAATT
GAGCAGGTGAACTTACAAGGGTCTTGCTTCGCAATCCAAAGTCAGATGGT
CCTTGAATTTTTGACCCCCCGGAAATGGGATATATTGACCCCAAAGGCTA
AGGACACCCAGGAAGCACTGCGAATCGAGCTCGAAAAAATGACTGCTCAC
TTTCCTGCGGCCAAAGAGAAAGACTTGAAACGCTTTTTAATGGGTTTCCA
TACGAAGGCAGACAAGGCTATTCCAGCTTACGAGGCGCACTTGCATTGGT
AAGAACGAGATGGTGGGGCGGTCCTACACATCTCCTGGGCCAAGCCTTTG
ATCACCGTTCGCTCAATATCACGTTCATATGTAGGCGGGCTCAAAATCTT
CCTATTGCCAAAGAATCTTGTTTGAAGGAGCTCCAAAAAGGGCGTTTCTA
TTTTCATGGGATGGATCTAGAAGGGCGTCCTGTAGCCTATTACTCACTTG
CATGCCATGACCCAAAACATTGCGACATATCAGAAATTATGCGTATGATG
ACTTATCAGGTAGGGAACGACTATGATGCTTTGTCCACCGTTGCTCTTCC
AGGATGAACACCAATTCGAGTTGTCTTTTTTATTTCCTTCCTTCAACGAC
CTTGCATGACTGGATCCCGTTGACAGGTCGAAAAGGTGTTGGCTGAGATG
CCAGATGATGTGAAAGGCTTTACAATTGTTTGGGATACGCGCAATACGGG
TATAAAGGTAAGGCGCCTTACGGAAAAGACAGCATAGTAGAGGAGCACCA
GGGAAGATGCGTAGTCTTTCACACAGTTGGTAGGCCAAGAAAGGGGTGGA
TCTTGATGTTTTATGCTCTCACCACCTGATGGCTGCTTTCACCTCTTCAT
CCCGGTATTTCTGCGTATTAAATTTCACGTTTATTAATTTTCAGAACACA
GACACGGAATTTCTCCGCGAGTTTCTCAATTTTTTCCGCGCCCAGTACCC
GGAGGTTCTTGCTCAACTGCTGATCGTTCCCGTCGGATTTTTCCAAAGGA
CGATGTGGAACACATTCGCGCGCTTTTTGGACGAGCGCAGAGCGTCTCGC
ATTCGTATGGTCGCGACGATGGAGGACTTGCGAGATTACATTTCTGAGAA
AGAACTTCTGACGACCCATGGGGGTAAGAATACTTGGCATTTTGATCCAG
ACAACGCCTAAGAATGGAAAATTGTCCGTGCACTTCCTCGCCCGATATTC
AAAGGTCCAGATGTTATTTTTTCCATCACGTTATGAGATGGACTGTTCAG
GTGACTGGTGTGTATGTTCTTTGTAAGCTACGAATTTTAACGTGTATAGG
AGAAGGGTACTACGCTGTTACATGGACACACAAACAGACGCGCTCAATCG
TGCATGAAAGGTACTGAATTCAGAAGAAAGACACGTGAAAGTAAGATAGC
GCCGAGTATTGCTGG
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Coding sequence (CDS) from alignment at CM002470.1:324512..326276-

>rna7051 ID=rna7051|Name=rna7051|organism=Nannochloropsis gaditana|type=CDS|length=2904bp|location=Sequence derived from alignment at CM002470.1:324512..326276- (Nannochloropsis gaditana)
AACACAGACACGGAATTTCTCCGCGAGTTTCTCAATTTTTTCCGCGCCCA
GTACCCGGAGGTTCTTGCTCAACTGCTGATCGTTCCCGTCGGATTTTTCC
AAAGGACGATGTGGAACACATTCGCGCGCTTTTTGGACGAGCGCAGAGCG
TCTCGCATTCGTATGGTCGCGACGATGGAGGACTTGCGAGATTACATTTC
TGAGAAAGAACTTCTGACGACCCATGGGGGTAAGAATACTTGGCATTTTG
ATCCAGACAACGCCTAAGTCGAAAAGGTGTTGGCTGAGATGCCAGATGAT
GTGAAAGGCTTTACAATTGTTTGGGATACGCGCAATACGGGTATAAAGGC
GGGCTCAAAATCTTCCTATTGCCAAAGAATCTTGTTTGAAGGAGCTCCAA
AAAGGGCGTTTCTATTTTCATGGGATGGATCTAGAAGGGCGTCCTGTAGC
CTATTACTCACTTGCATGCCATGACCCAAAACATTGCGACATATCAGAAA
TTATGCGTATGATGACTTATCAGATGGTCCTTGAATTTTTGACCCCCCGG
AAATGGGATATATTGACCCCAAAGGCTAAGGACACCCAGGAAGCACTGCG
AATCGAGCTCGAAAAAATGACTGCTCACTTTCCTGCGGCCAAAGAGAAAG
ACTTGAAACGCTTTTTAATGGGTTTCCATACGAAGGCAGACAAGGCTATT
CCAGCTTACGAGGCGCACTTGCATTGAACACAGACACGGAATTTCTCCGC
GAGTTTCTCAATTTTTTCCGCGCCCAGTACCCGGAGGTTCTTGCTCAACT
GCTGATCGTTCCCGTCGGATTTTTCCAAAGGACGATGTGGAACACATTCG
CGCGCTTTTTGGACGAGCGCAGAGCGTCTCGCATTCGTATGGTCGCGACG
ATGGAGGACTTGCGAGATTACATTTCTGAGAAAGAACTTCTGACGACCCA
TGGGGGTAAGAATACTTGGCATTTTGATCCAGACAACGCCTAAGTCGAAA
AGGTGTTGGCTGAGATGCCAGATGATGTGAAAGGCTTTACAATTGTTTGG
GATACGCGCAATACGGGTATAAAGGCGGGCTCAAAATCTTCCTATTGCCA
AAGAATCTTGTTTGAAGGAGCTCCAAAAAGGGCGTTTCTATTTTCATGGG
ATGGATCTAGAAGGGCGTCCTGTAGCCTATTACTCACTTGCATGCCATGA
CCCAAAACATTGCGACATATCAGAAATTATGCGTATGATGACTTATCAGA
TGGTCCTTGAATTTTTGACCCCCCGGAAATGGGATATATTGACCCCAAAG
GCTAAGGACACCCAGGAAGCACTGCGAATCGAGCTCGAAAAAATGACTGC
TCACTTTCCTGCGGCCAAAGAGAAAGACTTGAAACGCTTTTTAATGGGTT
TCCATACGAAGGCAGACAAGGCTATTCCAGCTTACGAGGCGCACTTGCAT
TGAACACAGACACGGAATTTCTCCGCGAGTTTCTCAATTTTTTCCGCGCC
CAGTACCCGGAGGTTCTTGCTCAACTGCTGATCGTTCCCGTCGGATTTTT
CCAAAGGACGATGTGGAACACATTCGCGCGCTTTTTGGACGAGCGCAGAG
CGTCTCGCATTCGTATGGTCGCGACGATGGAGGACTTGCGAGATTACATT
TCTGAGAAAGAACTTCTGACGACCCATGGGGGTAAGAATACTTGGCATTT
TGATCCAGACAACGCCTAAGTCGAAAAGGTGTTGGCTGAGATGCCAGATG
ATGTGAAAGGCTTTACAATTGTTTGGGATACGCGCAATACGGGTATAAAG
GCGGGCTCAAAATCTTCCTATTGCCAAAGAATCTTGTTTGAAGGAGCTCC
AAAAAGGGCGTTTCTATTTTCATGGGATGGATCTAGAAGGGCGTCCTGTA
GCCTATTACTCACTTGCATGCCATGACCCAAAACATTGCGACATATCAGA
AATTATGCGTATGATGACTTATCAGATGGTCCTTGAATTTTTGACCCCCC
GGAAATGGGATATATTGACCCCAAAGGCTAAGGACACCCAGGAAGCACTG
CGAATCGAGCTCGAAAAAATGACTGCTCACTTTCCTGCGGCCAAAGAGAA
AGACTTGAAACGCTTTTTAATGGGTTTCCATACGAAGGCAGACAAGGCTA
TTCCAGCTTACGAGGCGCACTTGCATTGAACACAGACACGGAATTTCTCC
GCGAGTTTCTCAATTTTTTCCGCGCCCAGTACCCGGAGGTTCTTGCTCAA
CTGCTGATCGTTCCCGTCGGATTTTTCCAAAGGACGATGTGGAACACATT
CGCGCGCTTTTTGGACGAGCGCAGAGCGTCTCGCATTCGTATGGTCGCGA
CGATGGAGGACTTGCGAGATTACATTTCTGAGAAAGAACTTCTGACGACC
CATGGGGGTAAGAATACTTGGCATTTTGATCCAGACAACGCCTAAGTCGA
AAAGGTGTTGGCTGAGATGCCAGATGATGTGAAAGGCTTTACAATTGTTT
GGGATACGCGCAATACGGGTATAAAGGCGGGCTCAAAATCTTCCTATTGC
CAAAGAATCTTGTTTGAAGGAGCTCCAAAAAGGGCGTTTCTATTTTCATG
GGATGGATCTAGAAGGGCGTCCTGTAGCCTATTACTCACTTGCATGCCAT
GACCCAAAACATTGCGACATATCAGAAATTATGCGTATGATGACTTATCA
GATGGTCCTTGAATTTTTGACCCCCCGGAAATGGGATATATTGACCCCAA
AGGCTAAGGACACCCAGGAAGCACTGCGAATCGAGCTCGAAAAAATGACT
GCTCACTTTCCTGCGGCCAAAGAGAAAGACTTGAAACGCTTTTTAATGGG
TTTCCATACGAAGGCAGACAAGGCTATTCCAGCTTACGAGGCGCACTTGC
ATTG
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Synonyms
Publications