EWM23633.1, cds7034 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|585104785|gb|EWM23633.1| (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 506.138 bits (1302), Expect = 0.000e+0 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
Query: 1 MVLEFLTPRKWDILTPKAKDTQEALRIELEKMTAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDPDNA 241
MVLEFLTPRKWDILTPKAKDTQEALRIELEKMTAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDPDNA
Sbjct: 1 MVLEFLTPRKWDILTPKAKDTQEALRIELEKMTAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDPDNA 241
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|551539036|ref|XP_005758036.1| (hypothetical protein EMIHUDRAFT_438954 [Emiliania huxleyi CCMP1516] >gi|485605498|gb|EOD05607.1| hypothetical protein EMIHUDRAFT_438954 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 125.176 bits (313), Expect = 2.810e-31 Identity = 69/208 (33.17%), Postives = 102/208 (49.04%), Query Frame = 0
Query: 33 TAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKE-SCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGI-KNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDP 238
T H A L+RFL+ K + AH+ WRA+NLPI E + L ELQKG+FY +G D GRP+ DP D+ +R + Y++E+V+A++P F + +D I KN D L+ YPE L + P G +W FLD R S+++ + T E+L + + + T +GG +T FDP
Sbjct: 43 TDHPLAGDSLQLRRFLVARKFKVPATVEMISAHVKWRAENLPIKPEGAVLAELQKGKFYSYGTDAAGRPLVLIHSGKFDPATRDLEASVRSVFYEIERVIAQLPPGQAQFAVFYDRTGFSIKKNWDYTLLKAVFTQLSNNYPERLGAGYVYPSGKLLPMLWGLVKHFLDARTRSKVKFINTQEELLKSLPAEYVPTAYGGSSTHAFDP 250
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|551572448|ref|XP_005772066.1| (hypothetical protein EMIHUDRAFT_444869 [Emiliania huxleyi CCMP1516] >gi|485623434|gb|EOD19637.1| hypothetical protein EMIHUDRAFT_444869 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 124.79 bits (312), Expect = 3.296e-31 Identity = 69/208 (33.17%), Postives = 102/208 (49.04%), Query Frame = 0
Query: 33 TAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKE-SCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGI-KNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDP 238
T H A L+RFL+ K + AH+ WRA+NLPI E + L ELQKG+FY +G D GRP+ DP D+ +R + Y++E+V+A++P F + +D I KN D L+ YPE L + P G +W FLD R S+++ + T E+L + + + T +GG +T FDP
Sbjct: 43 TDHPLAGDSLQLRRFLVARKFKVPATVEMISAHVKWRAENLPIKPEGAVLAELQKGKFYSYGTDAAGRPLVLIHSGKFDPATRDLEASVRSVFYEIERVIAQLPPGQAQFAVFYDRTGFSIKKNWDYTLLKAVFTQLSDNYPERLGAGYVYPSGKLLPMLWGLVKHFLDARTRSKVKFINTQEELLKSLPAEYVPTAYGGSSTHAFDP 250
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|1179510636|ref|XP_020677938.1| (random slug protein 5-like isoform X3 [Dendrobium catenatum]) HSP 1 Score: 96.6709 bits (239), Expect = 1.244e-20 Identity = 61/213 (28.64%), Postives = 99/213 (46.48%), Query Frame = 0
Query: 25 LRIELEKMTAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLP---IAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVA---TMEDLRDYISEKELLTTHGGK 231
LR +E+ ++ + LKRFL D+A HL WR +N+P I++ E+ + + + G D GRP+A H+P + D++E R Y +EK+ + M + FTI+ D + G N D L+ + YPE L +LL++ V + W F+D+ S+I V M L + I E +L +GG+
Sbjct: 16 LRNLVERKDSNAKDLDDSTLKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 228
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|1179510642|ref|XP_020677940.1| (random slug protein 5-like isoform X5 [Dendrobium catenatum]) HSP 1 Score: 95.5153 bits (236), Expect = 2.433e-20 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 0
Query: 44 LKRFLMGFHTKADKAIPAYEAHLHWRAQNLP---IAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVA---TMEDLRDYISEKELLTTHGGK 231
LKRFL D+A HL WR +N+P I++ E+ + + + G D GRP+A H+P + D++E R Y +EK+ + M + FTI+ D + G N D L+ + YPE L +LL++ V + W F+D+ S+I V M L + I E +L +GG+
Sbjct: 30 LKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 223
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|1179510639|ref|XP_020677939.1| (random slug protein 5-like isoform X4 [Dendrobium catenatum]) HSP 1 Score: 95.5153 bits (236), Expect = 2.876e-20 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 0
Query: 44 LKRFLMGFHTKADKAIPAYEAHLHWRAQNLP---IAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVA---TMEDLRDYISEKELLTTHGGK 231
LKRFL D+A HL WR +N+P I++ E+ + + + G D GRP+A H+P + D++E R Y +EK+ + M + FTI+ D + G N D L+ + YPE L +LL++ V + W F+D+ S+I V M L + I E +L +GG+
Sbjct: 30 LKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 223
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|1179510630|ref|XP_020677936.1| (random slug protein 5-like isoform X1 [Dendrobium catenatum]) HSP 1 Score: 95.5153 bits (236), Expect = 3.209e-20 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 0
Query: 44 LKRFLMGFHTKADKAIPAYEAHLHWRAQNLP---IAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVA---TMEDLRDYISEKELLTTHGGK 231
LKRFL D+A HL WR +N+P I++ E+ + + + G D GRP+A H+P + D++E R Y +EK+ + M + FTI+ D + G N D L+ + YPE L +LL++ V + W F+D+ S+I V M L + I E +L +GG+
Sbjct: 40 LKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 233
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|1179510633|ref|XP_020677937.1| (random slug protein 5-like isoform X2 [Dendrobium catenatum]) HSP 1 Score: 95.5153 bits (236), Expect = 3.562e-20 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 0
Query: 44 LKRFLMGFHTKADKAIPAYEAHLHWRAQNLP---IAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVA---TMEDLRDYISEKELLTTHGGK 231
LKRFL D+A HL WR +N+P I++ E+ + + + G D GRP+A H+P + D++E R Y +EK+ + M + FTI+ D + G N D L+ + YPE L +LL++ V + W F+D+ S+I V M L + I E +L +GG+
Sbjct: 40 LKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 233
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|831790876|ref|XP_012759531.1| (hypothetical protein SAMD00019534_006440 [Acytostelium subglobosum LB1] >gi|735860163|dbj|GAM17469.1| hypothetical protein SAMD00019534_006440 [Acytostelium subglobosum LB1]) HSP 1 Score: 94.7449 bits (234), Expect = 7.972e-20 Identity = 51/162 (31.48%), Postives = 84/162 (51.85%), Query Frame = 0
Query: 75 IAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHF 236
I +ES EL+ G+ +F+G D GRPV HD DI E R Y +EK A +P ++ T+++D + KN D E ++ ++ F+ YPE L + LIV + +WN ++D ++ V + + L +YI + LL ++GG +TW +
Sbjct: 79 ITEESVENELKTGKSFFYGWDNGGRPVCIIRTRKHDSSQRDIQEAHRYCVYFMEKGKALLPPGIETCTLIFDMTSFSTKNMDYELVKFIVDMFQKYYPESLNKCLIVNAPWIFTGIWNIIKHWMDPITVGKVNFVKS-KQLIEYIPAEHLLASYGGASTWKY 239
BLAST of EWM23633.1 vs. NCBI_GenBank
Match: gi|1160557537|ref|XP_020434396.1| (cellular retinaldehyde-binding/triple function domain-containing protein [Polysphondylium pallidum PN500] >gi|281208101|gb|EFA82279.1| cellular retinaldehyde-binding/triple function domain-containing protein [Polysphondylium pallidum PN500]) HSP 1 Score: 93.2041 bits (230), Expect = 2.955e-19 Identity = 51/162 (31.48%), Postives = 84/162 (51.85%), Query Frame = 0
Query: 75 IAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHF 236
I +E+ E++ G+ +FHG D EGRPV HD D+ E R Y +E A +P ++ T+++D + KN D ++ ++ F+ YPE LA+ LI+ + +WN +LD S+I V T + L DYI +LL +GG++ + +
Sbjct: 79 ITEETVDNEMKAGKSFFHGSDKEGRPVCIVRTRKHDSSQRDLEEAQRYCVYVMETGKALLPPGIETCTLIFDMSSFSTKNMDYPLVKFMVDMFQKYYPESLARCLILNAPWVFMGVWNIIKHWLDPYTVSKISFVKTRQ-LIDYIPADQLLMAYGGESKFKY 239 The following BLAST results are available for this feature:
BLAST of EWM23633.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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