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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF1995 |
| Orig transcript id | gnl|cribi|Naga_100165g14.9683.mrna |
| Orig protein id | gnl|cribi|Naga_100165g14.9683 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:317078..319195 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7047 ID=rna7047|Name=rna7047|organism=Nannochloropsis gaditana|type=mRNA|length=1851bp
ATACACCCCCCGAAAAAGCGGCAGGGTTGGCATCGTCAACATTTCATCGT
CTGGCAGACCGCTTGTTGCATGCTGGTGCCTCGTCTCCTCTCTCGTCGTA
TCGCGTTATTCTCTTCTGCCACTCACACAAACAACCTCCCCACCACCGTC
TGCTGCTGGCATCGAGACTCTAAGTGCCGTATTTTCTCCTCTGTGGCCAT
GGAAAAACCCGTAAGCAGCAACACAGCTACAAACGTACCTGAGGAAATTC
CCGAAGGATTTATGCTAATCAAAGAAGGACAAGCGAGTATGCTTTTCCCA
AGTGGAAACGAAGTATTTTATAACAAAGTCCAAGTCTTGAATCGTGATTT
GTCAATAATGATGCTACGACTCTTTGCTGAGCGTCGCTTAAGAGACAAAG
AGGCTAAACGTTTGAAAAAGGAAGGACTCACACCAGAGCAAGTGACCGCA
CAACTGGCGGACGTGGATTGGACGGCACGTGTGGCAGAGACGGCGGCAGA
GGAGGGCCTGGTGGTGCTAGATGCACTGGCTGCCTCGGGCTTGCGCTCCA
TCCGTTACTTTAAAGAAGTGCCGGGGATCAAGAAGATTGTTGTGAACGAT
TTGGAGGAACCGGCGGTGGAGCAAGCGCATCGAAACGTCGCCTACAACCG
GGTGGACCCAACCCGTGTGGCGCCCCAACAGGGGAACGCGACCCTAGTCA
TGTACCAACACGCAGAAAGCAGGGAACAGTTTGACGTGATCGACATCGAT
CCCTATGGATCTGCCGCACCCTTTATGGACGCGGCCGTGCAGGCAGTGGC
GAACGGGGGGTTGCTGTGCGTGACGTGCACGGACTTGGCGGTCTTGAATG
GGAACCATCCGGAGGTGTGCTGGGGGAAGTACAGGGCCATGCCCACCAAG
GCCCGCTACATGCACGAGATGGCCGTGCGGATCGTCTTACAGGCCCTGGA
AACGCAGGCCAACCGCTACAGGCGCTACATTGTTCCCTTGCTAAGCGTGG
GGATTGATTTCTACCTCCGGGTATTCGTCCGTGTCTTTACCTCCCCCGCC
GAAGTCAAGAAAGCCTCCCTCAAGATGGCCTACGTCCACCAGTCCCTTGG
CTGCGGCTCCTTCTATCTCCAGACTGCCGGCAAGTACAGTGGCGACGCTG
GGAATGGTAGCTACCAGGCCTCCACGGGACCGACCTGTCCCCCGGTGTGC
CCTGAGACGGGGGCCGCTTTTCGACTCGGAGGCCCGATTTGGAGCGCGCC
GATGCATGACATGGAGTGGGTACTGGAGGCGCTGGGGCGTGCGGAGGAGC
AGGCGGACGCCGACGCCGAGGCGAAGACGGGCTTGGCCCCGCTGCCGACG
ACGGAGCGGATGGTGGGCTTGCTGACCGCGGTCTCCGAGGAGCTGGTGGA
TGTCCCCCTGCACTACACGCTCCAGGATATGGCCGGGACCCTGCACTGCA
CCTGTCCCCGCGTCGACGACGTGAAGGCCGCCCTCATCAACGCCGGGTAC
CGGGTCTCGAGCCAGCACAAGGAGCCGCGGGCCTTCAAGACGGACGCGCC
CCCCGCGGTCATGTGGGACATCATGCGATGCTGGGTACAGAAGCACCCGG
TCGGGCCCCGAGGCCAGAAGGAGAGCAGTCCGGCCGCCAAGATCCTAGCC
AAGGCTCCCAAGCTGCAGGCAAACTTTAGCTGGCCTCCGGAGTTGTTGGC
TCCCAAGAAAAAGGTGAGCCGGTACCCCCCCAACCCCGAGGCGTTCTGGG
GGCCCAAGAGCAAGGCCAAAGGCCGCAAGCGGAAGATGGAGGAGGGGGGG
CGGGAGAAGGAAGGACTGGAGGGGGCACGCGAGACGACGATGAAAGAGTA
G back to topprotein sequence of rna7047 >rna7047-protein ID=rna7047-protein|Name=rna7047|organism=Nannochloropsis gaditana|type=polypeptide|length=551bp
MTQPWYSRRTRKAISSRVIICLVLATLPLTINTFTLPCHIIHPPRVNQPK
PCVVRATSSVVEDFSSDQLREKLEGVWETNVPSSLNAIIKEAQASLAAAL
QAGEKRLRIDIRTPGLDEQFEQTAAREKALLLGVIEAFFPLFANRPTKIL
FESEGEAAMAAKAYSRGFEIPTSCSFSGLSPSSLSDSDEVVFVVEPTNRP
GSPVIVALEALLDACPGKTFVLFNPNLEPGGAGLGIRERDRRQSFLDSFR
SAYIYLCLASLSRPALVPRELGSLHYQYETDRYRLLRCLLPEDGPGSLNR
FLKRRIYATSLITPTAEAPPNFFSVQEWAGVRPGQEELSRAMQGAEAVLE
GLVRKMSGEGPPPVETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSR
KGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAV
QSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENKKLE
FKVESIKLGPLGFGSRGEGFFTFFYVDEAVAVARGQGGGLALWYREKEVE
G back to topmRNA from alignment at CM002470.1:317078..319195- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7047 ID=rna7047|Name=rna7047|organism=Nannochloropsis gaditana|type=mRNA|length=2118bp|location=Sequence derived from alignment at CM002470.1:317078..319195- (Nannochloropsis gaditana)
CTCTAACTCACTCATTTGAAACAGACATGACCCAACCATGGTATTCACGG
CGTACACGGAAGGCTATTTCGTCGCGAGTGATAATCTGCCTGGTGCTCGC
CACTTTGCCCCTGACAATAAATACTTTTACTCTGCCATGCCACATAATTC
ATCCACCCCGTGTCAATCAACCAAAGCCATGTGTTGTAAGGGCGACTTCT
TCCGTCGTGGAGGATTTTTCTTCCGATCAGCTGCGCGAAAAGCTGGAAGG
TGTCTGGGAAACGAACGTGCCCAGCTCGTTGAACGCAATAATCAAGGAAG
CTCAAGCATCGTTGGCTGCGGCCCTGCAGGCAGGCGAAAAGCGTTTGCGG
ATCGACATTCGAACGCCTGGATTGGACGAACAATTTGAGCAAACTGCCGC
TCGTGAGAAGGTAGGGTATTGCGGTCGTCCCACGTCAAGTCTTGCCCCAT
CTTTCAGTCCGAGAAGTCAGTCGTGGTTGAGGGCGCGGCCTTCTCATCTA
TCTAGCTAAGTTTTTCCTCTACACCGTTCTGTAGGCCCTCCTTCTTGGTG
TCATCGAAGCCTTTTTCCCGCTATTTGCAAACCGCCCCACCAAGATCCTC
TTCGAGTCCGAGGGGGAGGCGGCGATGGCCGCAAAAGCCTACAGCCGGGG
CTTCGAGATCCCAACTTCCTGCTCCTTTTCTGGCCTTTCTCCCAGCTCTC
TTTCAGACTCGGACGAGGTTGTGTTCGTAGTGGAGCCCACGAACCGACCG
GGCTCCCCCGTCATCGTCGCCCTCGAGGCCCTCCTGGACGCCTGCCCGGG
CAAGACCTTCGTCCTCTTCAATCCCAACCTGGAGCCTGGGGGCGCGGGTC
TGGGGATCCGAGAGAGGGACCGACGCCAGTCTTTTCTGGACTCCTTTCGC
TCTGCCTACATCTATCTGTGCCTGGCCTCCCTCTCGAGACCGGCCTTGGT
CCCGCGGGAGCTCGGCAGCCTGCACTACCAGTACGAGACGGACAGATATC
GGCTCCTGCGCTGCCTCCTCCCCGAGGACGGGCCGGGGAGTTTGAACCGG
TTCTTGAAACGCAGGATCTACGCCACGTCTCTGATTACGCCTACTGCAGA
GGCCCCCCCCAATTTCTTCTCGGTCCAGGAATGGGCGGGCGTCCGGCCGG
GGCAGGAGGAGCTCTCTCGCGCCATGCAGGGCGCGGAGGCCGTCTTGGAG
GGCTTGGTGCGGAAGATGTCGGGGGAGGGCCCCCCGCCGGTGGAGACCGT
GGAGGCGGCGAAGGATGTCCTGGTGGAGGCGGCCCGGACGCGAGGAGTGG
ACCCGGAGCGGGTGGCTCGGGCCATCGGCTTCCTGGAGAAGGGGAGCCGG
AAGGGCAAGAAGGGCCCCGAGGAGAAGACGGCGGCCGCCGAGGAGCTGCG
ACGCCAGATACAAGGGCGTTGGCGCTTGATCTTCACGACTGGAACCAAAG
GGACGCAGGCGGCGGTGGGCAAGATCAACTATTTTCCCGTCAAGGCGGTG
CAGAGCTTCGGGGTCTCCTCTCTCCCCTCCTCCCCTTCCACCTCGTCTTC
CTCCCTCTCCACCAATTACAGCAACGTCATCTACTTGGGGTCCTGGCCCT
TGGTTCAGGTGCTCGGCTCCTTCTCTTGTCCAGAAAACAAGAAACTGGAG
TTCAAGGTGGAGAGCATTAAACTAGGCCCGTTGGGCTTTGGGTCGCGCGG
TGAGGGGTTCTTCACCTTCTTCTACGTGGACGAGGCCGTCGCGGTGGCCC
GAGGCCAGGGAGGGGGGTTGGCCTTGTGGTACCGGGAAAAGGAGGTGGAG
GGGTAGGAGGAGGAGGGGGTGGCTGGCAAGACGGTGGGAGGGAGTACAGG
CGGGGTCGGTCGTGGCGTCTCAGTTCAAGGACTAGGCCTTGGGTATCCAG
GACGACGGCCCTTGGCTTGGAAGGGAGTCTAGTCGCAGCGACGCTTGTCG
TGCTGGTTGTGATGATAGTGTGTCATAACAGTATTCGCTTTCTCGAGTGG
CTCGGGCCGGTATGTACGTTGAAGAACAGTCTAGAGTGTGAAGCGCACTT
CGGTCAGCTACCGATAAATACTGAATAAATGAAAAGCAGAATCTCATCGT
GTGTATCGTCACCAAACG back to topCoding sequence (CDS) from alignment at CM002470.1:317078..319195- >rna7047 ID=rna7047|Name=rna7047|organism=Nannochloropsis gaditana|type=CDS|length=3312bp|location=Sequence derived from alignment at CM002470.1:317078..319195- (Nannochloropsis gaditana)
GCCCTCCTTCTTGGTGTCATCGAAGCCTTTTTCCCGCTATTTGCAAACCG
CCCCACCAAGATCCTCTTCGAGTCCGAGGGGGAGGCGGCGATGGCCGCAA
AAGCCTACAGCCGGGGCTTCGAGATCCCAACTTCCTGCTCCTTTTCTGGC
CTTTCTCCCAGCTCTCTTTCAGACTCGGACGAGGTTGTGTTCGTAGTGGA
GCCCACGAACCGACCGGGCTCCCCCGTCATCGTCGCCCTCGAGGCCCTCC
TGGACGCCTGCCCGGGCAAGACCTTCGTCCTCTTCAATCCCAACCTGGAG
CCTGGGGGCGCGGGTCTGGGGATCCGAGAGAGGGACCGACGCCAGTCTTT
TCTGGACTCCTTTCGCTCTGCCTACATCTATCTGTGCCTGGCCTCCCTCT
CGAGACCGGCCTTGGTCCCGCGGGAGCTCGGCAGCCTGCACTACCAGTAC
GAGACGGACAGATATCGGCTCCTGCGCTGCCTCCTCCCCGAGGACGGGCC
GGGGAGTTTGAACCGGTTCTTGAAACGCAGGATCTACGCCACGTCTCTGA
TTACGCCTACTGCAGAGGCCCCCCCCAATTTCTTCTCGGTCCAGGAATGG
GCGGGCGTCCGGCCGGGGCAGGAGGAGCTCTCTCGCGCCATGCAGGGCGC
GGAGGCCGTCTTGGAGGGCTTGGTGCGGAAGATGTCGGGGGAGGGCCCCC
CGCCGGTGGAGACCGTGGAGGCGGCGAAGGATGTCCTGGTGGAGGCGGCC
CGGACGCGAGGAGTGGACCCGGAGCGGGTGGCTCGGGCCATCGGCTTCCT
GGAGAAGGGGAGCCGGAAGGGCAAGAAGGGCCCCGAGGAGAAGACGGCGG
CCGCCGAGGAGCTGCGACGCCAGATACAAGGGCGTTGGCGCTTGATCTTC
ACGACTGGAACCAAAGGGACGCAGGCGGCGGTGGGCAAGATCAACTATTT
TCCCGTCAAGGCGGTGCAGAGCTTCGGGGTCTCCTCTCTCCCCTCCTCCC
CTTCCACCTCGTCTTCCTCCCTCTCCACCAATTACAGCAACGTCATCTAC
TTGGGGTCCTGGCCCTTGGTTCAGGTGCTCGGCTCCTTCTCTTGTCCAGA
AAACAAGAAACTGGAGTTCAAGGTGGAGAGCATTAAACTAGGCCCGTTGG
GCTTTGGGTCGCGCGGTGAGGGGTTCTTCACCTTCTTCTACGTGGACGAG
GCCGTCGCGGTGGCCCGAGGCCAGGGAGGGGGGTTGGCCTTGTGGTACCG
GGAAAAGGAGGTGGAGGGGTAGATGACCCAACCATGGTATTCACGGCGTA
CACGGAAGGCTATTTCGTCGCGAGTGATAATCTGCCTGGTGCTCGCCACT
TTGCCCCTGACAATAAATACTTTTACTCTGCCATGCCACATAATTCATCC
ACCCCGTGTCAATCAACCAAAGCCATGTGTTGTAAGGGCGACTTCTTCCG
TCGTGGAGGATTTTTCTTCCGATCAGCTGCGCGAAAAGCTGGAAGGTGTC
TGGGAAACGAACGTGCCCAGCTCGTTGAACGCAATAATCAAGGAAGCTCA
AGCATCGTTGGCTGCGGCCCTGCAGGCAGGCGAAAAGCGTTTGCGGATCG
ACATTCGAACGCCTGGATTGGACGAACAATTTGAGCAAACTGCCGCTCGT
GAGAAGGCCCTCCTTCTTGGTGTCATCGAAGCCTTTTTCCCGCTATTTGC
AAACCGCCCCACCAAGATCCTCTTCGAGTCCGAGGGGGAGGCGGCGATGG
CCGCAAAAGCCTACAGCCGGGGCTTCGAGATCCCAACTTCCTGCTCCTTT
TCTGGCCTTTCTCCCAGCTCTCTTTCAGACTCGGACGAGGTTGTGTTCGT
AGTGGAGCCCACGAACCGACCGGGCTCCCCCGTCATCGTCGCCCTCGAGG
CCCTCCTGGACGCCTGCCCGGGCAAGACCTTCGTCCTCTTCAATCCCAAC
CTGGAGCCTGGGGGCGCGGGTCTGGGGATCCGAGAGAGGGACCGACGCCA
GTCTTTTCTGGACTCCTTTCGCTCTGCCTACATCTATCTGTGCCTGGCCT
CCCTCTCGAGACCGGCCTTGGTCCCGCGGGAGCTCGGCAGCCTGCACTAC
CAGTACGAGACGGACAGATATCGGCTCCTGCGCTGCCTCCTCCCCGAGGA
CGGGCCGGGGAGTTTGAACCGGTTCTTGAAACGCAGGATCTACGCCACGT
CTCTGATTACGCCTACTGCAGAGGCCCCCCCCAATTTCTTCTCGGTCCAG
GAATGGGCGGGCGTCCGGCCGGGGCAGGAGGAGCTCTCTCGCGCCATGCA
GGGCGCGGAGGCCGTCTTGGAGGGCTTGGTGCGGAAGATGTCGGGGGAGG
GCCCCCCGCCGGTGGAGACCGTGGAGGCGGCGAAGGATGTCCTGGTGGAG
GCGGCCCGGACGCGAGGAGTGGACCCGGAGCGGGTGGCTCGGGCCATCGG
CTTCCTGGAGAAGGGGAGCCGGAAGGGCAAGAAGGGCCCCGAGGAGAAGA
CGGCGGCCGCCGAGGAGCTGCGACGCCAGATACAAGGGCGTTGGCGCTTG
ATCTTCACGACTGGAACCAAAGGGACGCAGGCGGCGGTGGGCAAGATCAA
CTATTTTCCCGTCAAGGCGGTGCAGAGCTTCGGGGTCTCCTCTCTCCCCT
CCTCCCCTTCCACCTCGTCTTCCTCCCTCTCCACCAATTACAGCAACGTC
ATCTACTTGGGGTCCTGGCCCTTGGTTCAGGTGCTCGGCTCCTTCTCTTG
TCCAGAAAACAAGAAACTGGAGTTCAAGGTGGAGAGCATTAAACTAGGCC
CGTTGGGCTTTGGGTCGCGCGGTGAGGGGTTCTTCACCTTCTTCTACGTG
GACGAGGCCGTCGCGGTGGCCCGAGGCCAGGGAGGGGGGTTGGCCTTGTG
GTACCGGGAAAAGGAGGTGGAGGGGTAGATGACCCAACCATGGTATTCAC
GGCGTACACGGAAGGCTATTTCGTCGCGAGTGATAATCTGCCTGGTGCTC
GCCACTTTGCCCCTGACAATAAATACTTTTACTCTGCCATGCCACATAAT
TCATCCACCCCGTGTCAATCAACCAAAGCCATGTGTTGTAAGGGCGACTT
CTTCCGTCGTGGAGGATTTTTCTTCCGATCAGCTGCGCGAAAAGCTGGAA
GGTGTCTGGGAAACGAACGTGCCCAGCTCGTTGAACGCAATAATCAAGGA
AGCTCAAGCATCGTTGGCTGCGGCCCTGCAGGCAGGCGAAAAGCGTTTGC
GGATCGACATTCGAACGCCTGGATTGGACGAACAATTTGAGCAAACTGCC
GCTCGTGAGAAG back to top
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