EWM23631.1, cds7030 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|585104783|gb|EWM23631.1| (protein of unknown function DUF1995 [Nannochloropsis gaditana]) HSP 1 Score: 1113.6 bits (2879), Expect = 0.000e+0 Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0
Query: 1 MTQPWYSRRTRKAISSRVIICLVLATLPLTINTFTLPCHIIHPPRVNQPKPCVVRATSSVVEDFSSDQLREKLEGVWETNVPSSLNAIIKEAQASLAAALQAGEKRLRIDIRTPGLDEQFEQTAAREKALLLGVIEAFFPLFANRPTKILFESEGEAAMAAKAYSRGFEIPTSCSFSGLSPSSLSDSDEVVFVVEPTNRPGSPVIVALEALLDACPGKTFVLFNPNLEPGGAGLGIRERDRRQSFLDSFRSAYIYLCLASLSRPALVPRELGSLHYQYETDRYRLLRCLLPEDGPGSLNRFLKRRIYATSLITPTAEAPPNFFSVQEWAGVRPGQEELSRAMQGAEAVLEGLVRKMSGEGPPPVETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENKKLEFKVESIKLGPLGFGSRGEGFFTFFYVDEAVAVARGQGGGLALWYREKEVEG 551
MTQPWYSRRTRKAISSRVIICLVLATLPLTINTFTLPCHIIHPPRVNQPKPCVVRATSSVVEDFSSDQLREKLEGVWETNVPSSLNAIIKEAQASLAAALQAGEKRLRIDIRTPGLDEQFEQTAAREKALLLGVIEAFFPLFANRPTKILFESEGEAAMAAKAYSRGFEIPTSCSFSGLSPSSLSDSDEVVFVVEPTNRPGSPVIVALEALLDACPGKTFVLFNPNLEPGGAGLGIRERDRRQSFLDSFRSAYIYLCLASLSRPALVPRELGSLHYQYETDRYRLLRCLLPEDGPGSLNRFLKRRIYATSLITPTAEAPPNFFSVQEWAGVRPGQEELSRAMQGAEAVLEGLVRKMSGEGPPPVETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENKKLEFKVESIKLGPLGFGSRGEGFFTFFYVDEAVAVARGQGGGLALWYREKEVEG
Sbjct: 1 MTQPWYSRRTRKAISSRVIICLVLATLPLTINTFTLPCHIIHPPRVNQPKPCVVRATSSVVEDFSSDQLREKLEGVWETNVPSSLNAIIKEAQASLAAALQAGEKRLRIDIRTPGLDEQFEQTAAREKALLLGVIEAFFPLFANRPTKILFESEGEAAMAAKAYSRGFEIPTSCSFSGLSPSSLSDSDEVVFVVEPTNRPGSPVIVALEALLDACPGKTFVLFNPNLEPGGAGLGIRERDRRQSFLDSFRSAYIYLCLASLSRPALVPRELGSLHYQYETDRYRLLRCLLPEDGPGSLNRFLKRRIYATSLITPTAEAPPNFFSVQEWAGVRPGQEELSRAMQGAEAVLEGLVRKMSGEGPPPVETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENKKLEFKVESIKLGPLGFGSRGEGFFTFFYVDEAVAVARGQGGGLALWYREKEVEG 551
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|298707555|emb|CBJ30139.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.383 bits (272), Expect = 2.343e-23 Identity = 76/195 (38.97%), Postives = 108/195 (55.38%), Query Frame = 0
Query: 364 VETVEAAKDVLVEAARTRGVDPERVARAIGFLEK--GSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAV-GKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENK-KLEFKVESIKLGPLGFG-SRGEGF----FTFFYVDEAVAVARGQGGGLALWYREKEV 549
+ET+E A+ +V AA TR VDP+ V AI +EK GS+K +G + + L G WRLIFTTG TQ + GKI+Y P+KAVQ F +P + +N +YLGS+P+++ G+F+ E K +LEF + + L F ++GE FTF + + +ARG GGGLALW R+ V
Sbjct: 68 LETIEDAQTAIVRAAETRDVDPDTVIEAIRLIEKSGGSKKPLEGRDSSQPKFDLLTD--NGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVF-------NPDYT-------ITNGVYLGSFPVLKFSGTFTWAEEKARLEFTFNEVGVLGLNFPYNQGESKVPPGFTFMDISDRYVIARGAGGGLALWLRQDTV 246
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|676392061|ref|XP_009039308.1| (hypothetical protein AURANDRAFT_65948 [Aureococcus anophagefferens] >gi|323450170|gb|EGB06053.1| hypothetical protein AURANDRAFT_65948 [Aureococcus anophagefferens]) HSP 1 Score: 107.071 bits (266), Expect = 1.015e-20 Identity = 73/207 (35.27%), Postives = 99/207 (47.83%), Query Frame = 0
Query: 367 VEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFS-CPENKKLEFKVESIKL-----------------GPLGFGSRG---------EGFFTFFYVDEAVAVARGQGGGLALWYRE 546
++AA V AA T+G D + V A+ LEKG R K + +A E Q+ G WRL+FTTGT TQ VGKINYFP+KAVQ+F V+ SN I +G +PL++ G F + +++EF + I L G GS + FF + D +A ARG GGG+ALW R+
Sbjct: 427 IDAALAVCRSAAATKGEDSDDVVAALLALEKGMRAAAKASPDVSARTVE---QLDGCWRLVFTTGTIDTQKKVGKINYFPLKAVQTFDVA-------------RGRISNSILVGDFPLIRFFGDFEWLMDRRRVEFDFDQIALFNFGRIDLPKGGAAKIGASTGLGSENNVKMVEESKKPFFNWISADADIATARGGGGGIALWKRD 617
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|223992661|ref|XP_002286014.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977329|gb|EED95655.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 96.6709 bits (239), Expect = 5.797e-19 Identity = 74/207 (35.75%), Postives = 100/207 (48.31%), Query Frame = 0
Query: 367 VEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKG-TQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENK-KLEFKVE--------SIKLG---------PLGFGSRGE---------GFFTFFYVDEAVAVARGQGGGLALWYR 545
++ A +L AA T+ +P+RV A+ LEK +++ K A ++++ I G WRLIFTTGTK Q + G++NYFP+KA+Q F + P N IY PL++ G F E K KLEF + IKLG G GS+G FF + DE +A ARG GGGLALW R
Sbjct: 54 IQEAAQLLYRAAETKLENPDRVLDALELLEKDAKQQFKA--NPAAFSQDILNNISGDWRLIFTTGTKERQQKSGGRVNYFPLKAIQKFDATVTPKL-----------IENAIYAWDLPLIRFSGDFDFNERKRKLEFDFDLIEILGLFKIKLGRKEVAKIGASTGLGSKGNEKLAENDRRAFFDWISADEKIATARGGGGGLALWKR 247
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|1072226239|gb|OEU10982.1| (hypothetical protein FRACYDRAFT_193213 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 97.0561 bits (240), Expect = 8.169e-19 Identity = 81/220 (36.82%), Postives = 107/220 (48.64%), Query Frame = 0
Query: 364 VETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQG----RWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGS-WPLVQVLGSFS---CPEN--KKLEFKVESIKLG------PL------------GFGSRGE---------GFFTFFYVDEAVAVARGQGGGLALWYR 545
++ ++ AK +L AA T+ DP+ V A+ LEK SRK + + AE+ + G WRLIFTTGT TQ +G K+NYFP+KA QSF S PS P + L TN I+LG + LV+ G F P++ K+ F I+L PL G GS G FF + DE +A ARG GGG+ALW R
Sbjct: 59 LQQIDDAKKILYRAAETKKEDPDIVVAALLTLEKLSRKANQADPSR---AEQTLSALSGEGGVNWRLIFTTGTIDTQKKLGTKVNYFPLKATQSF--DSSPSGPEDGNPWLITNG---IFLGDEFALVKFEGDFDWTFTPKSGLTKVTFDFSRIQLFNGLLDIPLKKGEAASLGAKSGLGSEGNIKLNAKGKRAFFNWISADEKIATARGGGGGIALWKR 270
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|219129127|ref|XP_002184748.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403857|gb|EEC43807.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 96.2857 bits (238), Expect = 8.936e-19 Identity = 73/207 (35.27%), Postives = 96/207 (46.38%), Query Frame = 0
Query: 366 TVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCP-ENKKLEFKVESIKL-----------------GPLGFGSRG---------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
++E +L AA T+ D E+V A+ LE R+ + E+ A AE R + G WRL+FTTGT TQ GKINYFP+KAVQSF + P N IY G +P V+ G+ + +KLEF + + L G GS + FF + DE +A ARG GGGLALW R
Sbjct: 53 SLETHVALLTRAADTKTEDSEQVYTALAELETLMRR--RAREDYPATAEATLRALDGDWRLVFTTGTAQTQQKYGKINYFPIKAVQSFRTTKEP-----------MEIENGIYFGDFPAVRFSGTMEFDLQKRKLEFDFDKVLLLNFFDVTLKKGEAANLGAKSGLGSESNVVNTKRDKKAFFNWISADENIATARGGGGGLALWKR 246
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|397643583|gb|EJK75959.1| (hypothetical protein THAOC_02300 [Thalassiosira oceanica]) HSP 1 Score: 93.5893 bits (231), Expect = 5.289e-17 Identity = 74/207 (35.75%), Postives = 101/207 (48.79%), Query Frame = 0
Query: 367 VEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPEN-KKLEFKVESIKLGPL-----------------GFGSRG---------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
+E +K +L+ AA T+ +P V A+ +E+ R K E+ +E++ I G WRLIFTTGTK Q G +INYF KAVQSF + P N IY+G +PLV+ G + E +KLEF + I+L L G GS+ + FFT+ D+ +A ARG GGGLALW R
Sbjct: 187 IEESKQLLLRAATTKEENPSDVLEALESIERDCRSRFK--EDPAKFSEDILNNISGDWRLIFTTGTKEQQERRGGRINYFSPKAVQSFRADTTPKQ-----------IENGIYVGDFPLVKFSGDWEWNERVRKLEFDFDKIQLLGLISINLGRKEVAQIGSASGLGSKNNEKLAAEGKKAFFTWISADDNIATARGGGGGLALWKR 380
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|1210513912|dbj|GAX27211.1| (hypothetical protein FisN_13Lh233 [Fistulifera solaris]) HSP 1 Score: 88.1965 bits (217), Expect = 4.046e-16 Identity = 73/198 (36.87%), Postives = 95/198 (47.98%), Query Frame = 0
Query: 373 VLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCP-ENKKLEFKVE--------SIKLGPL---------GFGSRG------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
+L AA T+ D E V A+ LEK R+ + E AE + + G WRLIFTTGTK TQ G +INYFP+KAVQSF + N IY G +P ++ G F +++KLEF IKLG G GS+ + FF + D+++A ARG GGGLALW R
Sbjct: 51 LLKRAAETKQEDSEAVFDALSALEKQMRQVAR---EDPKIAESVLENLNGDWRLIFTTGTKDTQKRTGGRINYFPLKAVQSFRTDGMK-------------IENGIYFGDFPALKFGGEFEFSLKSRKLEFDFNRVTLFGLFDIKLGQKDAAELGAKSGLGSKNNVTNKRKPFFNWISADDSIATARGGGGGLALWKR 232
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|1210513275|dbj|GAX27672.1| (hypothetical protein FisN_13Hh233 [Fistulifera solaris]) HSP 1 Score: 87.4261 bits (215), Expect = 7.658e-16 Identity = 73/205 (35.61%), Postives = 98/205 (47.80%), Query Frame = 0
Query: 366 TVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCP-ENKKLEFKVE--------SIKLG---------PLGFGSRG------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
++E +L AA T+ D + V A+ LEK R+ + E AE + + G WRLIFTTGTK TQ G +INYFP+KAVQSF + N IY G +P ++ G F +++KLEF I+LG G GS+ + FF + DE++A ARG GGGLALW R
Sbjct: 42 SLEDNLTLLKRAAETKQEDSDAVFEALSALEKQMRQVAR---EDPNIAESVLENLNGDWRLIFTTGTKDTQKRTGGRINYFPLKAVQSFRTEGMK-------------IENGIYFGDFPALKFSGEFEFNLKSRKLEFDFNRVTLFGFFDIQLGQNDAAELGAKSGLGSKNNVTNKRKPFFNWISADESIATARGGGGGLALWKR 230
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|551543682|ref|XP_005759991.1| (hypothetical protein EMIHUDRAFT_359311 [Emiliania huxleyi CCMP1516] >gi|485608193|gb|EOD07562.1| hypothetical protein EMIHUDRAFT_359311 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 84.7297 bits (208), Expect = 4.314e-15 Identity = 68/197 (34.52%), Postives = 91/197 (46.19%), Query Frame = 0
Query: 380 TRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPE-NKKLEFKVESIKLGPL----------------GFGSRGE---------GFFTFFYVDEAVAVARGQGGGLALWYREKEVE 550
TR + V A+ LEK R K + + A + + G WRL FTTGT TQ +GKINYFP+KAVQ+F ++ P + +N IY+G LV+ G F E +KL F + I L L G GS+ FF + +E +A ARG GGGLALW R+ E +
Sbjct: 24 TRAEESHAVIEALVGLEKTMRAEAKADAKLSGATLD---ALDGAWRLCFTTGTVDTQKKIGKINYFPLKAVQTFDTTTEPMA-----------ITNGIYVGDVALVRFFGPFEFNEGTRKLTFDFDEISLLGLRIPLPKGGAAQIGAASGLGSKSNVARAKRELPAFFNWISANEDIATARGGGGGLALWRRDLEAQ 206 The following BLAST results are available for this feature:
BLAST of EWM23631.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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