EWM23631.1, cds7030 (CDS) Nannochloropsis gaditana

Overview
NameEWM23631.1
Unique Namecds7030
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:318786..319169 -
Alignment locationCM002470.1:317390..318661 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23631.1
Productprotein of unknown function DUF1995
Orig transcript idgnl|cribi|Naga_100165g14.9683.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:318786..319169 -
CM002470.1supercontigCM002470.1:317390..318661 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995
Homology
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|585104783|gb|EWM23631.1| (protein of unknown function DUF1995 [Nannochloropsis gaditana])

HSP 1 Score: 1113.6 bits (2879), Expect = 0.000e+0
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0
Query:    1 MTQPWYSRRTRKAISSRVIICLVLATLPLTINTFTLPCHIIHPPRVNQPKPCVVRATSSVVEDFSSDQLREKLEGVWETNVPSSLNAIIKEAQASLAAALQAGEKRLRIDIRTPGLDEQFEQTAAREKALLLGVIEAFFPLFANRPTKILFESEGEAAMAAKAYSRGFEIPTSCSFSGLSPSSLSDSDEVVFVVEPTNRPGSPVIVALEALLDACPGKTFVLFNPNLEPGGAGLGIRERDRRQSFLDSFRSAYIYLCLASLSRPALVPRELGSLHYQYETDRYRLLRCLLPEDGPGSLNRFLKRRIYATSLITPTAEAPPNFFSVQEWAGVRPGQEELSRAMQGAEAVLEGLVRKMSGEGPPPVETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENKKLEFKVESIKLGPLGFGSRGEGFFTFFYVDEAVAVARGQGGGLALWYREKEVEG 551
            MTQPWYSRRTRKAISSRVIICLVLATLPLTINTFTLPCHIIHPPRVNQPKPCVVRATSSVVEDFSSDQLREKLEGVWETNVPSSLNAIIKEAQASLAAALQAGEKRLRIDIRTPGLDEQFEQTAAREKALLLGVIEAFFPLFANRPTKILFESEGEAAMAAKAYSRGFEIPTSCSFSGLSPSSLSDSDEVVFVVEPTNRPGSPVIVALEALLDACPGKTFVLFNPNLEPGGAGLGIRERDRRQSFLDSFRSAYIYLCLASLSRPALVPRELGSLHYQYETDRYRLLRCLLPEDGPGSLNRFLKRRIYATSLITPTAEAPPNFFSVQEWAGVRPGQEELSRAMQGAEAVLEGLVRKMSGEGPPPVETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENKKLEFKVESIKLGPLGFGSRGEGFFTFFYVDEAVAVARGQGGGLALWYREKEVEG
Sbjct:    1 MTQPWYSRRTRKAISSRVIICLVLATLPLTINTFTLPCHIIHPPRVNQPKPCVVRATSSVVEDFSSDQLREKLEGVWETNVPSSLNAIIKEAQASLAAALQAGEKRLRIDIRTPGLDEQFEQTAAREKALLLGVIEAFFPLFANRPTKILFESEGEAAMAAKAYSRGFEIPTSCSFSGLSPSSLSDSDEVVFVVEPTNRPGSPVIVALEALLDACPGKTFVLFNPNLEPGGAGLGIRERDRRQSFLDSFRSAYIYLCLASLSRPALVPRELGSLHYQYETDRYRLLRCLLPEDGPGSLNRFLKRRIYATSLITPTAEAPPNFFSVQEWAGVRPGQEELSRAMQGAEAVLEGLVRKMSGEGPPPVETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENKKLEFKVESIKLGPLGFGSRGEGFFTFFYVDEAVAVARGQGGGLALWYREKEVEG 551          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|298707555|emb|CBJ30139.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 109.383 bits (272), Expect = 2.343e-23
Identity = 76/195 (38.97%), Postives = 108/195 (55.38%), Query Frame = 0
Query:  364 VETVEAAKDVLVEAARTRGVDPERVARAIGFLEK--GSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAV-GKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENK-KLEFKVESIKLGPLGFG-SRGEGF----FTFFYVDEAVAVARGQGGGLALWYREKEV 549
            +ET+E A+  +V AA TR VDP+ V  AI  +EK  GS+K  +G +      + L     G WRLIFTTG   TQ  + GKI+Y P+KAVQ F       +P  +        +N +YLGS+P+++  G+F+  E K +LEF    + +  L F  ++GE      FTF  + +   +ARG GGGLALW R+  V
Sbjct:   68 LETIEDAQTAIVRAAETRDVDPDTVIEAIRLIEKSGGSKKPLEGRDSSQPKFDLLTD--NGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVF-------NPDYT-------ITNGVYLGSFPVLKFSGTFTWAEEKARLEFTFNEVGVLGLNFPYNQGESKVPPGFTFMDISDRYVIARGAGGGLALWLRQDTV 246          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|676392061|ref|XP_009039308.1| (hypothetical protein AURANDRAFT_65948 [Aureococcus anophagefferens] >gi|323450170|gb|EGB06053.1| hypothetical protein AURANDRAFT_65948 [Aureococcus anophagefferens])

HSP 1 Score: 107.071 bits (266), Expect = 1.015e-20
Identity = 73/207 (35.27%), Postives = 99/207 (47.83%), Query Frame = 0
Query:  367 VEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFS-CPENKKLEFKVESIKL-----------------GPLGFGSRG---------EGFFTFFYVDEAVAVARGQGGGLALWYRE 546
            ++AA  V   AA T+G D + V  A+  LEKG R   K   + +A   E   Q+ G WRL+FTTGT  TQ  VGKINYFP+KAVQ+F V+                 SN I +G +PL++  G F    + +++EF  + I L                    G GS           + FF +   D  +A ARG GGG+ALW R+
Sbjct:  427 IDAALAVCRSAAATKGEDSDDVVAALLALEKGMRAAAKASPDVSARTVE---QLDGCWRLVFTTGTIDTQKKVGKINYFPLKAVQTFDVA-------------RGRISNSILVGDFPLIRFFGDFEWLMDRRRVEFDFDQIALFNFGRIDLPKGGAAKIGASTGLGSENNVKMVEESKKPFFNWISADADIATARGGGGGIALWKRD 617          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|223992661|ref|XP_002286014.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977329|gb|EED95655.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 96.6709 bits (239), Expect = 5.797e-19
Identity = 74/207 (35.75%), Postives = 100/207 (48.31%), Query Frame = 0
Query:  367 VEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKG-TQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPENK-KLEFKVE--------SIKLG---------PLGFGSRGE---------GFFTFFYVDEAVAVARGQGGGLALWYR 545
            ++ A  +L  AA T+  +P+RV  A+  LEK +++  K      A ++++   I G WRLIFTTGTK   Q + G++NYFP+KA+Q F  +  P               N IY    PL++  G F   E K KLEF  +         IKLG           G GS+G           FF +   DE +A ARG GGGLALW R
Sbjct:   54 IQEAAQLLYRAAETKLENPDRVLDALELLEKDAKQQFKA--NPAAFSQDILNNISGDWRLIFTTGTKERQQKSGGRVNYFPLKAIQKFDATVTPKL-----------IENAIYAWDLPLIRFSGDFDFNERKRKLEFDFDLIEILGLFKIKLGRKEVAKIGASTGLGSKGNEKLAENDRRAFFDWISADEKIATARGGGGGLALWKR 247          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|1072226239|gb|OEU10982.1| (hypothetical protein FRACYDRAFT_193213 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 97.0561 bits (240), Expect = 8.169e-19
Identity = 81/220 (36.82%), Postives = 107/220 (48.64%), Query Frame = 0
Query:  364 VETVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQG----RWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGS-WPLVQVLGSFS---CPEN--KKLEFKVESIKLG------PL------------GFGSRGE---------GFFTFFYVDEAVAVARGQGGGLALWYR 545
            ++ ++ AK +L  AA T+  DP+ V  A+  LEK SRK  +    +   AE+    + G     WRLIFTTGT  TQ  +G K+NYFP+KA QSF   S PS P   +  L TN    I+LG  + LV+  G F     P++   K+ F    I+L       PL            G GS G           FF +   DE +A ARG GGG+ALW R
Sbjct:   59 LQQIDDAKKILYRAAETKKEDPDIVVAALLTLEKLSRKANQADPSR---AEQTLSALSGEGGVNWRLIFTTGTIDTQKKLGTKVNYFPLKATQSF--DSSPSGPEDGNPWLITNG---IFLGDEFALVKFEGDFDWTFTPKSGLTKVTFDFSRIQLFNGLLDIPLKKGEAASLGAKSGLGSEGNIKLNAKGKRAFFNWISADEKIATARGGGGGIALWKR 270          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|219129127|ref|XP_002184748.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403857|gb|EEC43807.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 96.2857 bits (238), Expect = 8.936e-19
Identity = 73/207 (35.27%), Postives = 96/207 (46.38%), Query Frame = 0
Query:  366 TVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCP-ENKKLEFKVESIKL-----------------GPLGFGSRG---------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
            ++E    +L  AA T+  D E+V  A+  LE   R+  +  E+  A AE   R + G WRL+FTTGT  TQ   GKINYFP+KAVQSF  +  P               N IY G +P V+  G+     + +KLEF  + + L                    G GS           + FF +   DE +A ARG GGGLALW R
Sbjct:   53 SLETHVALLTRAADTKTEDSEQVYTALAELETLMRR--RAREDYPATAEATLRALDGDWRLVFTTGTAQTQQKYGKINYFPIKAVQSFRTTKEP-----------MEIENGIYFGDFPAVRFSGTMEFDLQKRKLEFDFDKVLLLNFFDVTLKKGEAANLGAKSGLGSESNVVNTKRDKKAFFNWISADENIATARGGGGGLALWKR 246          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|397643583|gb|EJK75959.1| (hypothetical protein THAOC_02300 [Thalassiosira oceanica])

HSP 1 Score: 93.5893 bits (231), Expect = 5.289e-17
Identity = 74/207 (35.75%), Postives = 101/207 (48.79%), Query Frame = 0
Query:  367 VEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPEN-KKLEFKVESIKLGPL-----------------GFGSRG---------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
            +E +K +L+ AA T+  +P  V  A+  +E+  R   K  E+    +E++   I G WRLIFTTGTK  Q   G +INYF  KAVQSF   + P               N IY+G +PLV+  G +   E  +KLEF  + I+L  L                 G GS+          + FFT+   D+ +A ARG GGGLALW R
Sbjct:  187 IEESKQLLLRAATTKEENPSDVLEALESIERDCRSRFK--EDPAKFSEDILNNISGDWRLIFTTGTKEQQERRGGRINYFSPKAVQSFRADTTPKQ-----------IENGIYVGDFPLVKFSGDWEWNERVRKLEFDFDKIQLLGLISINLGRKEVAQIGSASGLGSKNNEKLAAEGKKAFFTWISADDNIATARGGGGGLALWKR 380          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|1210513912|dbj|GAX27211.1| (hypothetical protein FisN_13Lh233 [Fistulifera solaris])

HSP 1 Score: 88.1965 bits (217), Expect = 4.046e-16
Identity = 73/198 (36.87%), Postives = 95/198 (47.98%), Query Frame = 0
Query:  373 VLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCP-ENKKLEFKVE--------SIKLGPL---------GFGSRG------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
            +L  AA T+  D E V  A+  LEK  R+  +   E    AE +   + G WRLIFTTGTK TQ   G +INYFP+KAVQSF    +                N IY G +P ++  G F    +++KLEF            IKLG           G GS+       + FF +   D+++A ARG GGGLALW R
Sbjct:   51 LLKRAAETKQEDSEAVFDALSALEKQMRQVAR---EDPKIAESVLENLNGDWRLIFTTGTKDTQKRTGGRINYFPLKAVQSFRTDGMK-------------IENGIYFGDFPALKFGGEFEFSLKSRKLEFDFNRVTLFGLFDIKLGQKDAAELGAKSGLGSKNNVTNKRKPFFNWISADDSIATARGGGGGLALWKR 232          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|1210513275|dbj|GAX27672.1| (hypothetical protein FisN_13Hh233 [Fistulifera solaris])

HSP 1 Score: 87.4261 bits (215), Expect = 7.658e-16
Identity = 73/205 (35.61%), Postives = 98/205 (47.80%), Query Frame = 0
Query:  366 TVEAAKDVLVEAARTRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVG-KINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCP-ENKKLEFKVE--------SIKLG---------PLGFGSRG------EGFFTFFYVDEAVAVARGQGGGLALWYR 545
            ++E    +L  AA T+  D + V  A+  LEK  R+  +   E    AE +   + G WRLIFTTGTK TQ   G +INYFP+KAVQSF    +                N IY G +P ++  G F    +++KLEF            I+LG           G GS+       + FF +   DE++A ARG GGGLALW R
Sbjct:   42 SLEDNLTLLKRAAETKQEDSDAVFEALSALEKQMRQVAR---EDPNIAESVLENLNGDWRLIFTTGTKDTQKRTGGRINYFPLKAVQSFRTEGMK-------------IENGIYFGDFPALKFSGEFEFNLKSRKLEFDFNRVTLFGFFDIQLGQNDAAELGAKSGLGSKNNVTNKRKPFFNWISADESIATARGGGGGLALWKR 230          
BLAST of EWM23631.1 vs. NCBI_GenBank
Match: gi|551543682|ref|XP_005759991.1| (hypothetical protein EMIHUDRAFT_359311 [Emiliania huxleyi CCMP1516] >gi|485608193|gb|EOD07562.1| hypothetical protein EMIHUDRAFT_359311 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 84.7297 bits (208), Expect = 4.314e-15
Identity = 68/197 (34.52%), Postives = 91/197 (46.19%), Query Frame = 0
Query:  380 TRGVDPERVARAIGFLEKGSRKGKKGPEEKTAAAEELRRQIQGRWRLIFTTGTKGTQAAVGKINYFPVKAVQSFGVSSLPSSPSTSSSSLSTNYSNVIYLGSWPLVQVLGSFSCPE-NKKLEFKVESIKLGPL----------------GFGSRGE---------GFFTFFYVDEAVAVARGQGGGLALWYREKEVE 550
            TR  +   V  A+  LEK  R   K   + + A  +    + G WRL FTTGT  TQ  +GKINYFP+KAVQ+F  ++ P +            +N IY+G   LV+  G F   E  +KL F  + I L  L                G GS+            FF +   +E +A ARG GGGLALW R+ E +
Sbjct:   24 TRAEESHAVIEALVGLEKTMRAEAKADAKLSGATLD---ALDGAWRLCFTTGTVDTQKKIGKINYFPLKAVQTFDTTTEPMA-----------ITNGIYVGDVALVRFFGPFEFNEGTRKLTFDFDEISLLGLRIPLPKGGAAQIGAASGLGSKSNVARAKRELPAFFNWISANEDIATARGGGGGLALWRRDLEAQ 206          
The following BLAST results are available for this feature:
BLAST of EWM23631.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104783|gb|EWM23631.1|0.000e+0100.00protein of unknown function DUF1995 [Nannochlorops... [more]
gi|298707555|emb|CBJ30139.1|2.343e-2338.97conserved unknown protein [Ectocarpus siliculosus][more]
gi|676392061|ref|XP_009039308.1|1.015e-2035.27hypothetical protein AURANDRAFT_65948 [Aureococcus... [more]
gi|223992661|ref|XP_002286014.1|5.797e-1935.75predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072226239|gb|OEU10982.1|8.169e-1936.82hypothetical protein FRACYDRAFT_193213 [Fragilario... [more]
gi|219129127|ref|XP_002184748.1|8.936e-1935.27predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397643583|gb|EJK75959.1|5.289e-1735.75hypothetical protein THAOC_02300 [Thalassiosira oc... [more]
gi|1210513912|dbj|GAX27211.1|4.046e-1636.87hypothetical protein FisN_13Lh233 [Fistulifera sol... [more]
gi|1210513275|dbj|GAX27672.1|7.658e-1635.61hypothetical protein FisN_13Hh233 [Fistulifera sol... [more]
gi|551543682|ref|XP_005759991.1|4.314e-1534.52hypothetical protein EMIHUDRAFT_359311 [Emiliania ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7047rna7047Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications