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Properties
| Property Name | Value |
|---|
| Product | n -dimethylguanosine trna methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100165g15.9692.mrna |
| Orig protein id | gnl|cribi|Naga_100165g15.9692 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:315184..317034 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7046 ID=rna7046|Name=rna7046|organism=Nannochloropsis gaditana|type=mRNA|length=1449bp
GGGGGGGTGATGGATACAGCGAACTAGAGATCTAAGCGAGAAGTTAGTGC
TCGGCAAAGAATGTTACAGTATGGCTGGTTGAATGAAAAAGGGGCTCTGC
CTGTGTCTGTCGCTGGTTGGAGTATCTTTTACCGACCTTGGCCGTTACGT
TGCTTCTACCGTTGCGGGCACCCGGCAACTAAAGTTGGCAAAATCGAGCT
AAACGAGAAAGCATGGGCGGCCGGAAGGGCCGCAAGAGCCGCCGAAAGAA
GTTATTTATGGCCGCATTGTTAGTCACGAGGCGACCCCGCGTCCGCTTTG
CCTTCTCTCCCCGCCTCCACATTCTCAAGCGCTCCTTTCCTTTCTTCCCC
CACCCCGCCCAGGCCGCTTCCTCCCAACATGGCCGGTAAGTACCCGCACC
TGGACCCCCGTCAGCTCTGCGTCTTCATCACGGGCGCCACCGCGGGCTTC
GGGCAAGCGACTGCCCTTCGTTTTCTGGCGGGCGGGGCCAGGGTCGTCGC
CCTGGGCCGGCGCGCGGAACGCCTCGAAGCCTTGGCTCGCCTTCATCAAG
AGCAAGAGCATGGTTCCGGGGAGGGTCCCCGGGGCGAGAGCGAGCGGTTG
CACACCATCCAAGCGGATGTGGGGGATGTGGAGGGGATGAAGGCTGCCCT
GGGGGCCCTCCCCCCCGCCTTCCGGGACGTGGACGTGCTCGTCAACAATG
CCGGTTTCGCCGCGGGACTGGGCCTGGCTCATGAGAGCAGCTTGGAAGAC
TGGCACGCCATGGTGGAGACGAACATAAAGGGCGTGCTCAACACCACGCA
CTTGCTGCTCCCGGGTATGGTGGCGCGGAAAAGGGGACACGTAGTCATGA
TGGGCAGCGTGGCCTCCCGCTATCCCTACCCCGGAGGGAACTGCTACGGG
GGCACCAAAGCCTTTGTCCACCAGTTCGCCATGAATCTGCGGGCGGATCT
GGCGGGGACGAACGTGCGTGTGACTAACGTGCTGCCGGGCATGTGCGAGA
CCGAGTTCAGCCTGGTTCGCTTCAAAGGCGACGAGGCGCGGGCTAAGAAA
GTGTACGATGGCATGACGCCCTTGACGGCGGAGGACATCGCAGAGGTAGT
GTACTGGACGACTACACTGCCGGCTCACGTGAACGTAAATGCGCTCGAAA
TCATGCCGGTACAGCAAGCTTTCGCCCCTTTTGCCGTGTCGCGAAGAAGT
CCATCTCCCTTGTCAAAGGGGAAGGCAGACAAAGAGGATTCTTGAAATAA
TTTCCAAAGCCTTGGCGAAGAAGGAGGGTTGGATTAATGTACTTCATGGG
TTGTAAGGGAAATAGGAAGAAATGGGACGGCCGTGGAACTACCGGGCGTC
CGACAAAAAGTTGACCGTCCACAGGCAAGCTCGGCGGCGAATGGAGTTTG
TAAGCTATTGAAGTTTTTAATAAAATAAGCCGCCATGCCTGTAGTACTG back to topprotein sequence of rna7046 >rna7046-protein ID=rna7046-protein|Name=rna7046|organism=Nannochloropsis gaditana|type=polypeptide|length=593bp
MLVPRLLSRRIALFSSATHTNNLPTTVCCWHRDSKCRIFSSVAMEKPVSS
NTATNVPEEIPEGFMLIKEGQASMLFPSGNEVFYNKVQVLNRDLSIMMLR
LFAERRLRDKEAKRLKKEGLTPEQVTAQLADVDWTARVAETAAEEGLVVL
DALAASGLRSIRYFKEVPGIKKIVVNDLEEPAVEQAHRNVAYNRVDPTRV
APQQGNATLVMYQHAESREQFDVIDIDPYGSAAPFMDAAVQAVANGGLLC
VTCTDLAVLNGNHPEVCWGKYRAMPTKARYMHEMAVRIVLQALETQANRY
RRYIVPLLSVGIDFYLRVFVRVFTSPAEVKKASLKMAYVHQSLGCGSFYL
QTAGKYSGDAGNGSYQASTGPTCPPVCPETGAAFRLGGPIWSAPMHDMEW
VLEALGRAEEQADADAEAKTGLAPLPTTERMVGLLTAVSEELVDVPLHYT
LQDMAGTLHCTCPRVDDVKAALINAGYRVSSQHKEPRAFKTDAPPAVMWD
IMRCWVQKHPVGPRGQKESSPAAKILAKAPKLQANFSWPPELLAPKKKVS
RYPPNPEAFWGPKSKAKGRKRKMEEGGREKEGLEGARETTMKE back to topmRNA from alignment at CM002470.1:315184..317034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7046 ID=rna7046|Name=rna7046|organism=Nannochloropsis gaditana|type=mRNA|length=1851bp|location=Sequence derived from alignment at CM002470.1:315184..317034+ (Nannochloropsis gaditana)
ATACACCCCCCGAAAAAGCGGCAGGGTTGGCATCGTCAACATTTCATCGT
CTGGCAGACCGCTTGTTGCATGCTGGTGCCTCGTCTCCTCTCTCGTCGTA
TCGCGTTATTCTCTTCTGCCACTCACACAaacaacctccccaccaccgtc
TGCTGCTGGCATCGAGACTCTAAGTGCCGTATTTTCTCCTCTGTGGCCAT
GGAAAAACCCGTAAGCAGCAACACAGCTACAAACGTACCTGAGGAAATTC
CCGAAGGATTTATGCTAATCAAAGAAGGACAAGCGAGTATGCTTTTCCCA
AGTGGAAACGAAGTATTTTATAACAAAGTCCAAGTCTTGAATCGTGATTT
GTCAATAATGATGCTACGACTCTTTGCTGAGCGTCGCTTAAGAGACAAAG
AGGCTAAACgtttgaaaaaggaaggactCACACCAGAGCAAGTGACCGCA
CAACTGGCGGACGTGGATTGGACGGCACGTGTGGCAGAGacggcggcaga
ggagggcctggtggtgCTAGATGCACTGGCTGCCTCGGGCTTGCGCTCCA
TCCGTTACTTTAAAGAAGTGCCGGGGATCAAGAAGATTGTTGTGAACGAT
TTGGAGGAACCGGCGGTGGAGCAAGCGCATCGAAACGTCGCCTACAACCG
GGTGGACCCAACCCGTGTGGCGCCCCAACAGGGGAACGCGACCCTAGTCA
TGTACCAACACGCAGAAAGCAGGGAACAGTTTGACGTGATCGACATCGAT
CCCTATGGATCTGCCGCACCCTTTATGGACGCGGCCGTGCAGGCAGTGGC
GAACGGGGGGTTGCTGTGCGTGACGTGCACGGACTTGGCGGTCTTGAATG
GGAACCATCCGGAGGTGTGCTGGGGGAAGTACAGGGCCATGCCCACCAAG
GCCCGCTACATGCACGAGATGGCCGTGCGGATCGTCTTACAGGCCCTGGA
AACGCAGGCCAACCGCTACAGGCGCTACATTGTTCCCTTGCTAAGCGTGG
GGATTGATTtctacctccgggtattcgTCCGTGTCTTTACCTCCCCCGCC
GAAGTCAAGAAAGCCTCCCTCAAGATGGCCTACGTCCACCAGTCCCTTGG
CTGCGGCTCCTTCTATCTCCAGACTGCCGGCAAGTACAGTGGCGACGCTG
GGAATGGTAGCTACCAGGCCTCCACGGGACCGACCTGTCCCCCGGTGTGC
CCTGAGACGGGGGCCGCTTTTCGACTCGGAGGCCCGATTTGGAGCGCGCC
GATGCATGACATGGAGTGGGTactggaggcgctggggcgtgcggaggagc
aggcggacgCCGACGCCGAGGCGAAGACGGGCTTGGCCCCGCTGCCGACG
ACGGAGCGGATGGTGGGCTTGCTGACCGCGGTCtccgaggagctggtgga
tgTCCCCCTGCACTACACGCTCCAGGATATGGCCGGGACCCTGCACTGCA
CCTGTCCCCGCGTCGACGACGTGAAGGCCGCCCTCATCAACGCCGGGTAC
CGGGTCTCGAGCCAGCACAAGGAGCCGCGGGCCTTCAAGACGGACGCGCC
CCCCGCGGTCATGTGGGACATCATGCGATGCTGGGTACAGAAGCACCCGG
TCGGGCCCCGAGGCCAGAAGGAGAGCAGTCCGGCCGCCAAGATCCTAGCC
AAGGCTCCCAAGCTGCAGGCAAACTTTAGCTGGCCTCCGGAGTTGTTGGC
TCCCAAGAAAAAGGTGAGCCGGTACCCCCCCAACCCCGAGGCGTTCTGGG
GGCCCAAGAGCAAGGCCAAAGGCCGCAAgcggaagatggaggaggggggg
cgggagaaggaaggactgGAGGGGGCACGCGAGACGACGATGAAAGAGTA
G back to topCoding sequence (CDS) from alignment at CM002470.1:315184..317034+ >rna7046 ID=rna7046|Name=rna7046|organism=Nannochloropsis gaditana|type=CDS|length=1782bp|location=Sequence derived from alignment at CM002470.1:315184..317034+ (Nannochloropsis gaditana)
ATGCTGGTGCCTCGTCTCCTCTCTCGTCGTATCGCGTTATTCTCTTCTGC
CACTCACACAaacaacctccccaccaccgtcTGCTGCTGGCATCGAGACT
CTAAGTGCCGTATTTTCTCCTCTGTGGCCATGGAAAAACCCGTAAGCAGC
AACACAGCTACAAACGTACCTGAGGAAATTCCCGAAGGATTTATGCTAAT
CAAAGAAGGACAAGCGAGTATGCTTTTCCCAAGTGGAAACGAAGTATTTT
ATAACAAAGTCCAAGTCTTGAATCGTGATTTGTCAATAATGATGCTACGA
CTCTTTGCTGAGCGTCGCTTAAGAGACAAAGAGGCTAAACgtttgaaaaa
ggaaggactCACACCAGAGCAAGTGACCGCACAACTGGCGGACGTGGATT
GGACGGCACGTGTGGCAGAGacggcggcagaggagggcctggtggtgCTA
GATGCACTGGCTGCCTCGGGCTTGCGCTCCATCCGTTACTTTAAAGAAGT
GCCGGGGATCAAGAAGATTGTTGTGAACGATTTGGAGGAACCGGCGGTGG
AGCAAGCGCATCGAAACGTCGCCTACAACCGGGTGGACCCAACCCGTGTG
GCGCCCCAACAGGGGAACGCGACCCTAGTCATGTACCAACACGCAGAAAG
CAGGGAACAGTTTGACGTGATCGACATCGATCCCTATGGATCTGCCGCAC
CCTTTATGGACGCGGCCGTGCAGGCAGTGGCGAACGGGGGGTTGCTGTGC
GTGACGTGCACGGACTTGGCGGTCTTGAATGGGAACCATCCGGAGGTGTG
CTGGGGGAAGTACAGGGCCATGCCCACCAAGGCCCGCTACATGCACGAGA
TGGCCGTGCGGATCGTCTTACAGGCCCTGGAAACGCAGGCCAACCGCTAC
AGGCGCTACATTGTTCCCTTGCTAAGCGTGGGGATTGATTtctacctccg
ggtattcgTCCGTGTCTTTACCTCCCCCGCCGAAGTCAAGAAAGCCTCCC
TCAAGATGGCCTACGTCCACCAGTCCCTTGGCTGCGGCTCCTTCTATCTC
CAGACTGCCGGCAAGTACAGTGGCGACGCTGGGAATGGTAGCTACCAGGC
CTCCACGGGACCGACCTGTCCCCCGGTGTGCCCTGAGACGGGGGCCGCTT
TTCGACTCGGAGGCCCGATTTGGAGCGCGCCGATGCATGACATGGAGTGG
GTactggaggcgctggggcgtgcggaggagcaggcggacgCCGACGCCGA
GGCGAAGACGGGCTTGGCCCCGCTGCCGACGACGGAGCGGATGGTGGGCT
TGCTGACCGCGGTCtccgaggagctggtggatgTCCCCCTGCACTACACG
CTCCAGGATATGGCCGGGACCCTGCACTGCACCTGTCCCCGCGTCGACGA
CGTGAAGGCCGCCCTCATCAACGCCGGGTACCGGGTCTCGAGCCAGCACA
AGGAGCCGCGGGCCTTCAAGACGGACGCGCCCCCCGCGGTCATGTGGGAC
ATCATGCGATGCTGGGTACAGAAGCACCCGGTCGGGCCCCGAGGCCAGAA
GGAGAGCAGTCCGGCCGCCAAGATCCTAGCCAAGGCTCCCAAGCTGCAGG
CAAACTTTAGCTGGCCTCCGGAGTTGTTGGCTCCCAAGAAAAAGGTGAGC
CGGTACCCCCCCAACCCCGAGGCGTTCTGGGGGCCCAAGAGCAAGGCCAA
AGGCCGCAAgcggaagatggaggagggggggcgggagaaggaaggactgG
AGGGGGCACGCGAGACGACGATGAAAGAGTAG back to top
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