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Properties
| Property Name | Value |
|---|
| Product | pas pac sensor hybrid histidine kinase |
| Orig transcript id | gnl|cribi|Naga_100191g12.7765.mrna |
| Orig protein id | gnl|cribi|Naga_100191g12.7765 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:290315..294867 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7034 ID=rna7034|Name=rna7034|organism=Nannochloropsis gaditana|type=mRNA|length=1013bp
GAACAACCGCTCTCTCAGGCCTACGCGGCTGCAGTTGTGACGGAGCGCAG
ATGGCGGAGCCCGATGACCCGAAGTCCAGGGACAACGGACGTCCTAAGAC
AGTGAAGCGATGAGGTGCATATTAAGGCGTCATGGCTCAAGCGGCGCGAC
CCGCCCACCCATATGCTCCCAATCAAACCAATAGCAGAATATCATAGGAA
AATTGAATGAAACGCAGCGAGTTTCTACATTTTGCTTCGGACTAATCACT
ACAAGGGAGGGGCATAAGGGGCGGAGACTCGATCAGATGGTACCGAAACA
TACAATGACTTCTTCGTGGATCCTGGACACTGCAGGGCATAGCAATTGCG
ATTCCTATGAACGCTCTTCGGTCCCTTATCACCGGTCATTCTCTCTCCTA
TATAAGGCTTCTCCGTCCACCGAGGAATATGATGGCGTCGACCTTCCCCT
CTCATTTCCCCTCCTGTCCAAGTCGCACAACCCCTTTTTCGCTCGTCCTT
ACCCTCCTACTTGCGATGACCTTGCAATCTCTACTTTACCTGTCCACTGG
GGCTCTGGATTCGGTCATGAAGCATGGATGCTGCTCTCTTATGTCCAAGG
CAAGGACTGTGCGCCTGGAGGCGCTGGCGAGATCAGAGGGCGGCATGCGG
GACGGGGCCATGTGCGGCACCCACGGCATGGTCACAGCGTCGCAGACTGC
GTGGGTGTGAACTGAGAATTTACACTGCGGTAAAAGGTGGTGTACAGATC
GGAGGCAACTTTCTTGTTGTCAGCGACACTTAGGGGGGATGAGGACGTGA
GCGAGAGCAGTGTGCAGAAAGTACGCAAAAAGAAGCAAGCGGCTGGGGAC
TGGAAGGTGGGAAAGAGTTTTAAAAAACAGCACGTAGGTTTACGGAAAGT
GTCTAGCGATTTTTCCGTCACGTCATATCATGTCATGTGGTGCATTTTTT
TTTCATCTTCCAGTCGCATCGAGACTGGAAAAGATCTCATTCTAAACATT
CTCACATTCGGCA back to topprotein sequence of rna7034 >rna7034-protein ID=rna7034-protein|Name=rna7034|organism=Nannochloropsis gaditana|type=polypeptide|length=513bp
MLVSISSHRMVDSVELGATKSRAASTGSTNGAQREGHGFKSLLEACNRIQ
EKQSNKISSTTNCPSTSSCGLPADGKVETTSASKNPDGPKGEFYHPLEKF
SRMAGLGQDKNTSTPPTNTSNGASSLSSQALRALSQASSFSRDVGYPTPV
PEKLAYMLPVQQKDGNASTVSYSPFPLLSATSSRSHASSSSCPSLSTSSS
TSKKDLPAGTSEGFAQSKNLGQGRLDSSNVMGPVNGHFMRHFSGPPTALE
VPTPAGCVDANAPPQRIVPPVDMTGVSTRSYRGNNKFDAQIHRDSSGNEE
EEADDDEGSEDGKNYHLDLTTLGKKRRAPRMDFSKLTPEEQIQWKKARAR
KYSAMARERQSKKEEALRAEVGRLQVYKTLVEAAPDAMLLLSNDAQGRIL
FANKESEKLFGFIPKGGAEKPLPGRCLWEWLDVTDRVAIFAAIGKVVLCK
HLVRAVPCTVWLPSGSVPKHDARGPQQSLKVLITLRSSAQGLILIIRPHQ
YTDRDSASMPGAM back to topmRNA from alignment at CM002470.1:290315..294867- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7034 ID=rna7034|Name=rna7034|organism=Nannochloropsis gaditana|type=mRNA|length=4553bp|location=Sequence derived from alignment at CM002470.1:290315..294867- (Nannochloropsis gaditana)
CGCGACAGGAGATGTTTTTCTTGGCGAGCATCCCGAGCTGTTGGGCGCAG
GACCGGAGGGATGGGAAAGGAAAAGCATTCTAGTGTTTGCAAAATGTCCC
TCGTCATTGGCAAATCAAGTTCTAGTCCAGAAGGACGTGATAAGGTCAAT
TATTGTACATTTTAATGTTTTGTTTTCATGCACGCGTTGAAACAACTCAT
TTCTTGAGTGCTTTTCCGACCTCCATCACTATTAGTATGTCCCCTGTTGA
TGGGTTTGACTTATACCGCGTGTAATACATTTTCTCCGAGAGGTTGCCGT
TTGTGGCTTCTAACACCAGACATTTTTCTATCGAAAGGGTACTTTGACGA
CACCGGTCCATTATTTGTCAAAATATGACGCAAACAATCCGCGGGAGGTA
AATGCGCTGCCTTGACTTTCACAGAATAAGCATTTTAAAATTTGCTTTTA
AAATAGCGCGCTTATGTAGAATCTAAGTTTGATCCTATTTGCTATAAGCC
ATTCTAATTACACCATGTGATTGGATGTGGCTGCATTGTTATAAGGGGAA
AACGAGTCTTGGGAAGCGCCGACCTTCGGATACTAGGAGACTTTCCCTGA
TCGACTATTTTAAAAGAAATGTTTCATGCGATAATATACGCCAAAAGAGA
TAAGGTTCAAGAGGTGGGACTTTGACCAATCGCATAATACCTGCTGCAGT
CAATTTCGCACAAAAATCAAGCCTTCAAAATCGTGGGCATGTGTTCCCAC
GTGTTACCCAGTGACATCTGGAAGGATGAAAAGTCTCTCTATTTCAATAT
CGGAAAAAGCGAGAGTCGATCATATGATCAACTGGAAAGCAAATCAGATG
CGCAAACTTGTGTGATGCAATTCGTCCTAGCTTTCTCATTGAAGAGGCCC
TAAAGCAACAAGAGTTGAATAGATGCGTATGATCGCCCAACACAGAAATC
ATCACAAATGTAACTCATCATATGGTTTTGCACCTGACGCCTTTAGAGTA
TGGTATCGGCTCTCGTGTGGGCCACATAAACACTTGGGTAAGGCTCGTGA
AAATCCCACCAACATGCATGCCACGAACCTCACCTTTGCGACCACATTCA
ATTTCTCATGCGTCGAAAGATAAAGCTACTAAGAGCGGTGTGGAGCAGGA
ATATCTCTATGATGTGGTCTTTGGCAGTCGATGGGCTGTTTCTAGGGCTT
TGGTATACAACATAAAGTGACAGGTTTCAATACCTGCTTTGGCGGTGGAA
TACTTCATAGGACACTTGCATCGCCATCTACTGCTTCAATTGTCCTTTTG
AGGCAATTGCTCTGCTTTCTAAGTAGGTTTTCCCTTACTACGTAGTCAGA
TATCTTGAGCGCTCCGCCTTTCTCTTGATAAAGGCTTTTTTCTTCACTTC
AAAAACCCACCGCTCGCGAGTCAGTCGCATGTACGTATTTTTCAGAACAA
TATGAATTATGGCGTCAGATTATTAAACAAGAAGACGTATTTAATGCGGC
ATACCGGCGCCATCAACCCTCAATTTTCCTCAAGTATTTTCCTCCCTTCT
CCATTTTCCTCCCTGCTCCTCACACTATCGGGTTGTCGACCTCCATGGTT
CGTACACGCCAATTTGGTTCTTATCATTTTCAAGATGACTACATAGTCCT
ATTCGTGAACAAATCAATATGACGAGTATTCCGCAGGGTTACATAGAGGG
ACCGCAAATTGGGGCCATGCGGTATCAAGCACCTCATGCCTTTACTTAGG
CCGGCCACCTGAGATCAAGACGAAATCTGGTCTGTCATATTCGTAACTCG
ATATTATGCGTCATGACACTCATGACTGGCTTCCTTGAACAAGTCATGTC
AGCTTACCTAAGTTTGAGTTCGACAACTGAATAGTGGATCGCCATCGGCC
TGCCAACAGGTCAGGCGAATAAGAGAGACAAGACATATCAGTTCAAGATG
CGACCCAAAAAAACAGGGCACCTAAAGGTTTTCACAAGAAAGACTTGGCG
AACGCGTCACAAGAAGGATTCGGCATCTCCTCGCTCATTGTTATCCGTGG
CGACCTTCAGCGTCCATGGTTTTCTTCCCAGGAAGCAGAATTGGTTGCAC
GTTTTTTAATTTATTTTCTAATTCTAATCACCGACAAAAGAGCAACTGTT
CAATGGCGTGTCCGCTTGCATGACAATCTATCCTAGGTCTACGTGTTGAA
CGCCTGAGCGGGTCTCTTTGCTCCATGGCAAAGTGGCCTGGGGCCTGCGC
ATCCACCTCGCGTGCGACCAGGACGGCGATCCCGTGGATTTCGGCAATCG
TTACACTTCCATTATTATGGGTCTTCTCCGTATTTTCAGGGACCTCGATC
TGCAGGAGGGGTGCATGGGAAATGAGCCAGATCGTTCACACATTACGTAG
CGCAAGTGGATACGTTTGAAAAGCTCTGCTCACATGTCGCTGTCATTCAT
CCATGCGTGGACATATTCAATCATCCGGACTTCCACCGCAGTTGCTGTTT
AGTTGGGCGAAGTCACGGATGTCGAGATAGTCGACAACAAAATATGTGTT
TTAGTAATTTTCCGAAAATTAAAACGACTCTTCATAGAATATTTGCTGAA
TTGGTCCATGCTTGTATCTATTTCATCCCACAGAATGGTCGACTCGGTGG
AGCTTGGGGCCACCAAATCCAGAGCAGCCAGTACTGGTTCCACCAACGGA
GCTCAGCGGGAAGGCCACGGGTTCAAATCATTACTGGAGGCTTGCAATAG
GATACAAGAGAAACAATCTAACAAAATAAGTAGCACTACAAATTGTCCAT
CTACATCATCTTGTGGGCTGCCGGCCGATGGCAAAGTCGAGACAACATCC
GCTTCCAAGAACCCAGATGGTCCCAAGGGAGAATTTTACCACCCGCTTGA
GAAATTCTCACGGATGGCCGGGCTTGGGCAAGATAAGAACACATCCACAC
CGCCCACAAACACTTCTAACGGCGCATCGTCCTTATCTTCGCAGGCGCTG
AGAGCCTTGTCTCAGGCCTCATCCTTCTCGCGCGACGTGGGCTATCCCAC
TCCAGTGCCCGAGAAGCTCGCCTACATGCTTCCCGTGCAACAAAAAGATG
GGAACGCTTCCACAGTATCATACTCCCCTTTCCCCTTACTCTCAGCTACA
TCTTCTCGATCTCATGCGTCGTCGTCCTCCTGTCCTTCCCTATCTACTTC
GTCCTCCACATCCAAGAAGGACCTTCCTGCGGGCACGTCCGAGGGCTTCG
CGCAATCCAAAAACTTGGGCCAAGGCCGCCTCGATTCATCCAATGTCATG
GGTCCTGTGAACGGACATTTTATGCGTCATTTTTCAGGACCTCCCACGGC
CTTGGAAGTTCCCACTCCAGCCGGGTGTGTAGATGCAAACGCTCCTCCGC
AGAGGATAGTCCCCCCCGTTGACATGACGGGTGTTTCGACGCGTTCCTAC
AGAGGGAATAACAAATTCGACGCACAGATCCATAGAGATAGCAGTGGGAA
TGAGGAGGAGGAGGCCGATGATGATGAGGGCAGTGAGGATGGGAAAAACT
ACCACTTGGACTTGACTACCCTGGGCAAAAAACGGCGAGCCCCCCGTATG
GATTTCTCCAAGCTGACGCCCGAAGAGCAGATACAGTGGAAGAAAGCTCG
GGCACGAAAATATAGTGCCATGGCTCGCGAGCGGCAGTCCAAGAAAGAGG
AGGCCCTGCGCGCGGAGGTGGGCAGGCTCCAAGTGTACAAGACGCTGGTA
GAGGCTGCCCCGGATGCGATGCTGCTGCTGTCCAACGACGCTCAGGGGCG
CATTCTCTTTGCGAATAAAGAGAGCGAAAAGTTGTTTGGGTTCATTCCAA
AGGGAGGCGCCGAGAAGCCATTGCCAGGGCGCTGTCTCTGGGAGTGGTTG
GACGTGACGGACAGGGTGGCTATCTTCGCAGCCATCGGGAAGGTCGTCCT
TTGCAAGCATCTGGTGCGCGCGGTGCCCTGTACTGTCTGGCTTCCCTCCG
GTTCTGTCCCAAAGCACGACGCACGAGGGCCGCAACAGTCGTTGAAAGTT
TTGATTACGCTTAGGTCAAGCGCGCAGGGCCTGATATTGATCATCCGGCC
ACACCAGTATACGGACCGGGACTCGGCTTCCATGCCTGGTGCCATGTGAG
TAGTGGGAGAGAAATATAGGGCGGAAGACAATTGAATGAGCGTAGGAGCG
GGTGGAATGACGAATGGAAAAATAACACGAATGGGCAAAATGAGTCTCTT
GAAAGAAGGGGCCGCTGTATGCATGAAGGAGTCATGCGAGAGAATGTGAT
TATCGTGCCTCTCGGCGATCATCGAAAAGCATAGCTGTCAATGTCATGAA
TATAGAGCATCGCAAGAGGGGTGCTAGGCATTAGCGGGTCAAGAACAAAG
CGTGAAAAGATTCGGGACGAAAGGGTGGTTCGAAAGGAAACGCTGGACAA
GAATTTGCCGAATGTGAGAATGTTTAGAATGAGATCTTTTCCAGTCTCGA
TGCGACTGGAAGATGAAAAAAAAATGCACCACATGACATGATATGACGTG
ACG back to topCoding sequence (CDS) from alignment at CM002470.1:290315..294867- >rna7034 ID=rna7034|Name=rna7034|organism=Nannochloropsis gaditana|type=CDS|length=1542bp|location=Sequence derived from alignment at CM002470.1:290315..294867- (Nannochloropsis gaditana)
ATGCTTGTATCTATTTCATCCCACAGAATGGTCGACTCGGTGGAGCTTGG
GGCCACCAAATCCAGAGCAGCCAGTACTGGTTCCACCAACGGAGCTCAGC
GGGAAGGCCACGGGTTCAAATCATTACTGGAGGCTTGCAATAGGATACAA
GAGAAACAATCTAACAAAATAAGTAGCACTACAAATTGTCCATCTACATC
ATCTTGTGGGCTGCCGGCCGATGGCAAAGTCGAGACAACATCCGCTTCCA
AGAACCCAGATGGTCCCAAGGGAGAATTTTACCACCCGCTTGAGAAATTC
TCACGGATGGCCGGGCTTGGGCAAGATAAGAACACATCCACACCGCCCAC
AAACACTTCTAACGGCGCATCGTCCTTATCTTCGCAGGCGCTGAGAGCCT
TGTCTCAGGCCTCATCCTTCTCGCGCGACGTGGGCTATCCCACTCCAGTG
CCCGAGAAGCTCGCCTACATGCTTCCCGTGCAACAAAAAGATGGGAACGC
TTCCACAGTATCATACTCCCCTTTCCCCTTACTCTCAGCTACATCTTCTC
GATCTCATGCGTCGTCGTCCTCCTGTCCTTCCCTATCTACTTCGTCCTCC
ACATCCAAGAAGGACCTTCCTGCGGGCACGTCCGAGGGCTTCGCGCAATC
CAAAAACTTGGGCCAAGGCCGCCTCGATTCATCCAATGTCATGGGTCCTG
TGAACGGACATTTTATGCGTCATTTTTCAGGACCTCCCACGGCCTTGGAA
GTTCCCACTCCAGCCGGGTGTGTAGATGCAAACGCTCCTCCGCAGAGGAT
AGTCCCCCCCGTTGACATGACGGGTGTTTCGACGCGTTCCTACAGAGGGA
ATAACAAATTCGACGCACAGATCCATAGAGATAGCAGTGGGAATGAGGAG
GAGGAGGCCGATGATGATGAGGGCAGTGAGGATGGGAAAAACTACCACTT
GGACTTGACTACCCTGGGCAAAAAACGGCGAGCCCCCCGTATGGATTTCT
CCAAGCTGACGCCCGAAGAGCAGATACAGTGGAAGAAAGCTCGGGCACGA
AAATATAGTGCCATGGCTCGCGAGCGGCAGTCCAAGAAAGAGGAGGCCCT
GCGCGCGGAGGTGGGCAGGCTCCAAGTGTACAAGACGCTGGTAGAGGCTG
CCCCGGATGCGATGCTGCTGCTGTCCAACGACGCTCAGGGGCGCATTCTC
TTTGCGAATAAAGAGAGCGAAAAGTTGTTTGGGTTCATTCCAAAGGGAGG
CGCCGAGAAGCCATTGCCAGGGCGCTGTCTCTGGGAGTGGTTGGACGTGA
CGGACAGGGTGGCTATCTTCGCAGCCATCGGGAAGGTCGTCCTTTGCAAG
CATCTGGTGCGCGCGGTGCCCTGTACTGTCTGGCTTCCCTCCGGTTCTGT
CCCAAAGCACGACGCACGAGGGCCGCAACAGTCGTTGAAAGTTTTGATTA
CGCTTAGGTCAAGCGCGCAGGGCCTGATATTGATCATCCGGCCACACCAG
TATACGGACCGGGACTCGGCTTCCATGCCTGGTGCCATGTGA back to top
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