EWM23655.1, cds7017 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23655.1 vs. NCBI_GenBank
Match: gi|585104808|gb|EWM23655.1| (pas pac sensor hybrid histidine kinase [Nannochloropsis gaditana]) HSP 1 Score: 1060.44 bits (2741), Expect = 0.000e+0 Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0
Query: 1 MLVSISSHRMVDSVELGATKSRAASTGSTNGAQREGHGFKSLLEACNRIQEKQSNKISSTTNCPSTSSCGLPADGKVETTSASKNPDGPKGEFYHPLEKFSRMAGLGQDKNTSTPPTNTSNGASSLSSQALRALSQASSFSRDVGYPTPVPEKLAYMLPVQQKDGNASTVSYSPFPLLSATSSRSHASSSSCPSLSTSSSTSKKDLPAGTSEGFAQSKNLGQGRLDSSNVMGPVNGHFMRHFSGPPTALEVPTPAGCVDANAPPQRIVPPVDMTGVSTRSYRGNNKFDAQIHRDSSGNEEEEADDDEGSEDGKNYHLDLTTLGKKRRAPRMDFSKLTPEEQIQWKKARARKYSAMARERQSKKEEALRAEVGRLQVYKTLVEAAPDAMLLLSNDAQGRILFANKESEKLFGFIPKGGAEKPLPGRCLWEWLDVTDRVAIFAAIGKVVLCKHLVRAVPCTVWLPSGSVPKHDARGPQQSLKVLITLRSSAQGLILIIRPHQYTDRDSASMPGAM 513
MLVSISSHRMVDSVELGATKSRAASTGSTNGAQREGHGFKSLLEACNRIQEKQSNKISSTTNCPSTSSCGLPADGKVETTSASKNPDGPKGEFYHPLEKFSRMAGLGQDKNTSTPPTNTSNGASSLSSQALRALSQASSFSRDVGYPTPVPEKLAYMLPVQQKDGNASTVSYSPFPLLSATSSRSHASSSSCPSLSTSSSTSKKDLPAGTSEGFAQSKNLGQGRLDSSNVMGPVNGHFMRHFSGPPTALEVPTPAGCVDANAPPQRIVPPVDMTGVSTRSYRGNNKFDAQIHRDSSGNEEEEADDDEGSEDGKNYHLDLTTLGKKRRAPRMDFSKLTPEEQIQWKKARARKYSAMARERQSKKEEALRAEVGRLQVYKTLVEAAPDAMLLLSNDAQGRILFANKESEKLFGFIPKGGAEKPLPGRCLWEWLDVTDRVAIFAAIGKVVLCKHLVRAVPCTVWLPSGSVPKHDARGPQQSLKVLITLRSSAQGLILIIRPHQYTDRDSASMPGAM
Sbjct: 1 MLVSISSHRMVDSVELGATKSRAASTGSTNGAQREGHGFKSLLEACNRIQEKQSNKISSTTNCPSTSSCGLPADGKVETTSASKNPDGPKGEFYHPLEKFSRMAGLGQDKNTSTPPTNTSNGASSLSSQALRALSQASSFSRDVGYPTPVPEKLAYMLPVQQKDGNASTVSYSPFPLLSATSSRSHASSSSCPSLSTSSSTSKKDLPAGTSEGFAQSKNLGQGRLDSSNVMGPVNGHFMRHFSGPPTALEVPTPAGCVDANAPPQRIVPPVDMTGVSTRSYRGNNKFDAQIHRDSSGNEEEEADDDEGSEDGKNYHLDLTTLGKKRRAPRMDFSKLTPEEQIQWKKARARKYSAMARERQSKKEEALRAEVGRLQVYKTLVEAAPDAMLLLSNDAQGRILFANKESEKLFGFIPKGGAEKPLPGRCLWEWLDVTDRVAIFAAIGKVVLCKHLVRAVPCTVWLPSGSVPKHDARGPQQSLKVLITLRSSAQGLILIIRPHQYTDRDSASMPGAM 513
BLAST of EWM23655.1 vs. NCBI_GenBank
Match: gi|585104880|gb|EWM23721.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 99.7525 bits (247), Expect = 7.975e-19 Identity = 60/178 (33.71%), Postives = 90/178 (50.56%), Query Frame = 0
Query: 326 RRAPRMDFSKLTPEEQIQWKKARARKYSAMARERQSKKEEALRAEVGRLQVYKTLVEAAPDAMLLLSNDAQGRILFANKESEKLFGFIPKGGAEKPLPGRCLWEWLDVTDRVAIFAAIGKVVLCKHLVRAVPCTVWLPSGSVPKHDARGPQQ------SLKVLITLRSSAQGLILIIR 497
+RA R D S TP E+ + +K RAR YSA RERQ+ + ALR +V L VYK +V+ AP+ +LS D+Q ++L+AN + F P+ GR +WE + D+ + A V+ K V C + G K ++ + V +++R QGLIL+IR
Sbjct: 278 KRARRTDLSGYTPGEKQERRKERARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAKVLYANAAFARFFLCHPESCV-----GRSVWEVVHREDKETVMGAFASAVMEKEEVGRARCRLGTSKGQGSKEAGGAGREVPVAVSEVPVAVSVRRGTQGLILVIR 450 The following BLAST results are available for this feature:
BLAST of EWM23655.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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