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Properties
| Property Name | Value |
|---|
| Product | transmembrane protein |
| Orig transcript id | gnl|cribi|Naga_100030g13.4188.mrna |
| Orig protein id | gnl|cribi|Naga_100030g13.4188 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:194504..196693 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6991 ID=rna6991|Name=rna6991|organism=Nannochloropsis gaditana|type=mRNA|length=4511bp
ACAGAGCGGCCTGACTCCCTCTCCTTCTCAGCGCCATGAAGGAGCCAGTG
CGGGGAGAAATTGCCCCAAAAAAGATAAGCCACATCCAATTTGGGTTGCT
ATCTGCGAATCAAATGGAGCGCATCTCGGAATTTCAGGTGTACCGCTCAG
ACCTCTTTACCATGCCACACCGCGCACCCGCCCCCAATAGCCCCCTCGAC
CCCCGCCTCGGCGTTTCGGACAAGACCTCTTCGTGCGCCACCTGCAAGCG
CAAGTTGACCGATTGCGCGGGCCATTTCGGCCACGTTAAGTTAGCCCTGC
CCGTCTTCCACATAGGTTTCTTCAAGCACTGCCAGACGCTGCTCGCCTGC
ATATGCAAGACCTGCGGGCGCGTCCTCCTACCCGAGGCGGAGCGCCGCTC
TTTCTTGCGACAAATGCGGTCGCCCAGCGCGGATGCCCTCCGCAAAGCCG
GCATCTTTAAAAGGGTGGTAGAAAAGTGCAAGAAGGCCTCGTACTGCTTC
GAGTGCAAGGCAGTGAACGGGAAGATCAAGAAGATCGCGGGCGCCGCCAC
CCTCAAGCTCGTGCACGAGAGGTACAGTGGGCGGAACGGAGGGGTGGAGC
ACCAGGCGCTGGTTCGGGCCATGAAAACGGCCCTCGCCCACAACCGGGAG
ATCGCGAACCACCTGGACAAGGCCCAGGAGGACATGAGCCCCCTCCGTGT
GTACCAGCTCTTCCAGAAGATCACGGACGAGGACGCGGTCGTCCTTTGGC
TGGACCCCAAGCACGGCCGGCCCGAGGACCTGCTGCTCCACAACCTTCTG
GTGCCCCCCGTGCCCATCCGGCCTTCAGTGGCCATGGAGGTGGGGGGCGG
CTCTAACGAGGACGACTTGACCACGCAGCTGGTGGAGATCCTGCAGATCA
ACCACTCGGTGCGCATGCTCCTGGCGGGGGGGGGGCAGCAGCAGTCCATC
ATGGAGCAGTGGGGCTTCGAGCAGGCCCAGGTCTCGCGTTTCATCAACGG
GGAGCTCCCGGGGAGCCAGCAGCACTACGGGGAGAAGAAGATCCGAGGCC
TGTGCCAGCGCCTCAAGGGGAAGAGCGGGCGCTTTCGGGGCAACCTCTCG
GGGAAACGCGTCGACTTCTCCGGCCGCACCGTCATCTCCCCGGACCCTAA
CCTGGCCATTGACCAGGTGGGGGTGCCCCTGCAGGTGGCCAAGATCATGA
CCTACCCCGAGCGCGTCTCGGCCTCGAACCGGGAGCGTCTGAAGCGCCTT
GTCCTGAACGGCCCTTCCCACCACCCCGGCGCCAACATCATCCGGCCTTC
GGGCGACAATGCCTTCACCAAGAGCCTCAGCTACGCGGACGAGCGGCAGC
GGCGGAAGATGGCGGAGGATCTGAAGCTGGGGGACGTGGTGGAGCGGCAC
ATGGTGGATGAGGACGTCGTTCTCTTCAACCGACAGCCCTCCCTGCACAA
GCTCTCCATCATGGCCCACCGGGTCAAGGTCATGCCCTGGCGGACCTTCC
GCTTCAACGAGTGCGTGTGCGCGCCCTACAACGCCGACTTCGACGGCGAC
GAGATGAACATGCACCTGCCCCAGACGGAGGAGGCGCGGGCGGAGGCGGC
CACCCTGATGGGCGTGACCTCGAACCTGGTGACTCCGCGGAATGGAGAGC
CCATGGTGGCGGCCACGCAGGATTTCATCACAGGCGCCTACCTGCTCACC
CAGAAGGACGTCTTCCTCACGCGCGAGGCCTTCTGTCGCCTCGCCGCGTA
CCTAGGAGACGCAGCCGAGCACATTGACCTCCCCCCCCCCTCCATCGTCC
GGCCCCACCAGCTCTGGACGGGCAAGCAAGTCTTCAGCCTCCTAATCAAG
GCCTCGCACCGCGTGGATTGCGACGTGAACCTGGAAATGGAGGAGCGGAA
CTACTCCAAGGCGGAGGCCATGGCCTACCTCTGCCCTCAGGACGGCTTTG
TATGCATCCGGCGCAGCGAGCTTGTCTCGGGCAACCTGTGCAAGAAGACC
CTGGGTGGACAGAAGGGGGGCCTCTACTACGTGCTGCTCAGGGACAAGGG
GGCCGAGCACGCGGCTAGGTGCATGAACCGGCTTGCCAAGCTCTGCGGGC
GCCTGATCGGGGGGCATCGGGGGTTTTCCATCGGCATTGACGACGTGATG
CCCTCCCCCGTGCTCTTGGACCTGAAGCGAGTCTTGCTCGAGGCGGGCTT
CAGCAAGTGCGACGAACAGATCCGGCTCTATGAGACGGGGAAGCTTCCTT
TGAAACCGGGCTGCAATTCGTTGCAATCCTTGGAGTCGGAGCTGAACTCG
GTCCTGGGAGGGATCCGACGCAAGTGCGGGGAGGAGGCTTTGCAGAAGCT
CCCCTGGCACAACGCGCCGCGGATCATGACCGAGTGCGGGTCCAAGGGCT
CCGACATCAACATCTCCCAGATGATGGCCATCCTTGGCCAGCAGTCCGTG
GGGGGCAAGCGCATCGAGAACGGCTTTGTCAACCGAACTCTGCCCCATTT
CCGCCCCGAATCCCTCTTCCCCGCCGCCCGAGGCTTTGTGCCCAATTCCT
TCTTCTCGGGGCTCACGGCCACCGAGTTCTTCTTCCACACCATGGGCGGG
AGGGAGGGGCTGGTGGACACGGCGGTGAAGACGGCAGAGACTGGCTACAT
GGCCCGCCGGCTCATGAAGGCCCTGGAGGACCTCTCCCTCCAGTACGATG
ACACAGTGCGGAACTCGGAGAAGACGGTCATCCAGTTCGTCTACGGGGAC
GACGGCCTCGATCCGGCCAAGATGGAAGACCAGAGTGCCCTCTTGGCCTT
TGGCGCCGGAGATCATTCGCTGGGCGAGCACGTGGAGAAAGGGAAGGGGC
CTCCCAGGCGGAAGAAAGCGCGCGCGGGCGCCGACCGGCCCGTGAACTTC
CCTCGCCTCCTCCTCCAGACCCTGGCCACGCACAAAGCCCCCCATGAGCG
CCCGCTATCTCCCCGACAGATCCAAGCCTTTGCCCAGGCCGCCGTGGAGT
CCCCGCCCTTCCAACGCCTGCTGCCGCAGGGCCACAAATTCTTGGAGGAG
ATCGAGGGCTTCGCGGCCGACTTGGCCGAGGCTTTGGAATCCTTGCTGGT
CTTTCTGGGCGCTCCCAAGGACGACAACCTAGAGGACGGTTACAGAGGTC
TCTTGGACTTCGATGTGGACGCAGTGCGGGCCAAATTGACGGCCTTGACC
GCGCTGGAGCGCCGGAACCGGGACGCGGTGGACACCGCTGAGGAGCGACG
AGGGATGGGGACCCCGGCATTAGGCCAGGCTTGGCGGGAGACAGTGCAGG
CGACGGTCTTCAATCTCGCCCGTATCACCGAGTCCCAGTTCCGGGTCATT
TTGGAGGAGGCGCTGGGTCGTTATAACCGCGCGTGCGTCGAGCCTGGGGA
GGCAGTGGGAGCCGTGGGGGCCCAAAGCATCTCGGAGCCGGCCACGCAGA
TGACGCTGAAAACCTTCCACTTCGCGGGCGTGGCTTCCATGAACGTAACG
CTGGGGGTACCGCGTCTGAAGGAGATCATCAATGCTTCCAAGGAGATCTC
CACGCCCATCATCACCGCCGCCCTTGTGCAGGACAGGTCCGAGACGGCCG
CCCGCGTGGCCAAGGCGGCGATCGAGCGCACCACCATCGGCCAGGTGGCC
CGCCACATCAAGGAGGTGTATGCCCCCCACATGGTCTACGTGGAGATCCT
GCTCGACCAGGAGGCTATCACCAAGCTCCACCTCCGCGTGGACGCGGCCT
CCGTGCGCATGGCCATTCTGCGGGGCCCGCACCGAGCGAGCGTGCTCAAG
GCGCTGAAGGAGCGGGACGTCCTCTACGACCCCCGGCACCCGGACCGTCT
GCGTGTCCTCCCGCCTGAGCTGAAAGAGGGCCGGGCCGGCAATGCGGTCC
CGTCCGAGCGGCGGATCTACTTCGTTATCCAGGCCTTGAAGGTCGCTCTC
CCGGCGGTGATGGTGCGAGGCATCAGCACGGTGAACCGCGCGATCGTGAA
CAAGGTGGAGGGGGAGGAGGACCGGTACAACCTGTTGATCGAGGGCTACG
GCCTGGCGGACGTGATGGGCACTCCCGGCGTCGACGGAAGACAGGCCAAG
TCCAACCACATCATCGAGGTGGAGCGCGTGCTTGGGATCGAGGCGGCCCG
CGCGGTGGTCGGGACGGAGATCGAGAACATCATGCAGGCCTACGGCATTC
GGATTGATACCCGGCACCGCATGCTCCTATCGGACGTGATGACCTTCAAA
GGGGAAGTGCTGGGCATCACCCGCTTCGGCGTGGCCAAGATGCGAGAGTC
CGTGCTGATGCTGGCCTCCTTCGAGAAGACAACAGACCATCTCTTCGACG
CGGCTGTCCATGGTCGTACCGACGCCATCGTCGGAGTCTCCGAGTGCATC
ATTATGGGGATCCCCATTCCTCTGGGCACGGGCCTTTTCAAGCTCTTGCA
TGACGTGCCCAAGCCGGGAATCGCCACGCGGAAGGGTTTACTGGACGAGC
GGGTGGAGTGA back to topprotein sequence of rna6991 >rna6991-protein ID=rna6991-protein|Name=rna6991|organism=Nannochloropsis gaditana|type=polypeptide|length=385bp
MASRVPASCCRRGPYKDNRALTEVATPPCIVRVSPNGAEGLTRPLDLAYW
LGLQDSYSTKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYA
PQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRR
NLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLIS
IGLALYDLDRNGKERSRLEDKAAALLKARSSNHVVGGAAEERAMGRDGKV
EANGHGHSDAHGRKEMENGTLTASSSSSSSSSSQPQGGDTVAEADVEESL
EEMAQASVKRFDLVGDLIRVSCDFLVACNTPGFDLPLHTLGFRLHDGIIG
TAGLVSALFAVYKAYPADMGRLRKRRLMRLLPTGP back to topmRNA from alignment at CM002470.1:194504..196693+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6991 ID=rna6991|Name=rna6991|organism=Nannochloropsis gaditana|type=mRNA|length=2190bp|location=Sequence derived from alignment at CM002470.1:194504..196693+ (Nannochloropsis gaditana)
aaaccGTGCGGTGAATCGTGTCGAGAAGAAGCTAGAACGGCACCTTTCCA
GCTTTCGGGAGGACCGTGCCCCTCTTGGCGTGGATTTGTGACTTTAGGAC
TTTGCCCGGGACGTGGGAGAGATGAGAGTACACGGAGCTTCTTCAAGCTA
TACCTCTGAGAAGCAATCAGCCCTGTAACGTAAGGCACGTTCAGCCGTCT
CACTTCCCCACCTCCGTAATAATGCATCTGACAGGAGACATTTCTTTCGG
GAGACTTGAGCCTGAGATCTTTTCCATCAGGCTTTCGGCTTTGAGACGCC
ATCGTCCgcgttgaaggagggagcatacagcctgagggaggcgccgTCTG
TTCTGCCCTAACTGAGGAGAGCTCTGTGCAACGCGAAGGCTATAAAAGAC
ACTTTGCGGCAACCAAAAATCAAGCTTCataaagagaagggggatcGGTA
CCTTTTATAAAACATGGCATCGCGCGTCCCAGCATCATGTTGTCGAAGGG
GGCCGTACAAAGACAACAGGGCCCTGACGGAGGTAGCTACTCCACCTTGT
ATTGTGCGTGTCTCTCCCAATGGTGCGGAGGGCTTGACACGGCCCCTGGA
CCTTGCGTATTGGCTTGGACTACAGGATTCATACAGCACGAAATTGCCTA
TCTCTCTCAAGTCGGTGGTGGCGCTTATTCGGTCATTGGAGGGCCGAGAC
AAAGTCAccaaggtagggagggtAATCTCTGGGAGGTGGACCGTCCATGA
AGGATTTCGTTATCACGTATCTGCGAGgtcaagaaagggagagaagcgtG
AAGCCTTTCTTCAAAGCGATCTTCGTGATGGTCGCTGAGTTCCTTACCCC
CTCGCACTGCACAGACCATCCAGTACGCCTGCCGCTTCCTGTGGTGGTAT
CACAAGACATACGCCCCCCAGGACAAGATCCGCGGTCCACGCTTTGAGAA
AATGTTCCGGGCTTCccaaatggcgcgaaaatgcttccacctcttccgga
ccctggaggagctggagaagcTGCAGGCCCTGTGCGCCGACTCCAAGTCC
CCGTTTTGGCGCCGAAACCTCTTGAtggtgcgggcggcggcaaTGGCCAT
TTATTGGTACTATGACAACAcctgcttcctcatcaaCGCCAAGCTCTCCA
GCTTCGACCAGCGGACGGCTGTGGCCCGAGACGGCGCGGCATGGACCCTA
GCCAACCTGATCTCGATCGGACTGGCGCTCTACGACCTAGATCGCaacgg
gaaggagcgaaGTCGCCTCGAGGATAAGGCGGCAGCGCTATTGAAGGCGC
GTTCCAGCAACCATGTAGTAGgcggggcggcggaggaaagggcgatgggg
agggacggaaaggtggaggcgaATGGGCATGGGCACAGCGACGCCCACgg
taggaaggaaatggaaaatggAACGCTCAcagccagcagcagcagtagta
gtagcagcagcagccagcCGCAGGGGGGAGACacggtggcggaggcagac
gtggaagagtcattggaggagatggcgcaGGCGAGCGTGAAGCGCTTCGA
CCTGGTCGGGGACCTCATTCGGGTCTCGTGCGACTTCCTGGTGGCCTGCA
ACACCCCGGGCTTCGACTTGCCTCTGCACACGCTCGGGTTCCGGCTGCAC
GACGGCATCATCGGCACGGCGGGGCTGGTCTCGGCGCTCTTCGCGGTGTA
CAAGGCCTATCCCGCGGATATGGGCCGCTTGCGGAAGCGCCGACTCATGC
GCCTGCTGCCGACAGGGCcttgagaaggagagggatggagaggaaaggct
ggAGTGTGTCTCAGGTGGGCGTGTCGTAACCCTGGAGAGTCTTTGCTTCT
CTGGACGCCTGCGGGTGTAATTGGCACGGGTGGATGAACTTGCCCGTCCG
GGGACAAGCGCTGGCGGGCGTGAGACTGACAATTTCCACACTGAGCAATG
CttgtggaggcagagcggaGTTTTGGCTGAAATAGCTGGCATGTTTATAA
ATGATTCCGATATTCACCGACAGCCTGTTGGAAACATGAAAGCCACGTCT
CTCTTTGTGAAGATATGCAACAAATTCTGCTTCGACTTGACGTAACAATT
CTGCCTTTTTGCGTTGTCGAAATGACCGACAAGCATTTAACTCGAAATAA
ACTTGGGAGGCACGAACAATTGAAAGAGTAGCTTCGCTTT back to topCoding sequence (CDS) from alignment at CM002470.1:194504..196693+ >rna6991 ID=rna6991|Name=rna6991|organism=Nannochloropsis gaditana|type=CDS|length=2316bp|location=Sequence derived from alignment at CM002470.1:194504..196693+ (Nannochloropsis gaditana)
ATGGCATCGCGCGTCCCAGCATCATGTTGTCGAAGGGGGCCGTACAAAGA
CAACAGGGCCCTGACGGAGGTAGCTACTCCACCTTGTATTGTGCGTGTCT
CTCCCAATGGTGCGGAGGGCTTGACACGGCCCCTGGACCTTGCGTATTGG
CTTGGACTACAGGATTCATACAGCACGAAATTGCCTATCTCTCTCAAGTC
GGTGGTGGCGCTTATTCGGTCATTGGAGGGCCGAGACAAAGTCAccaagA
CCATCCAGTACGCCTGCCGCTTCCTGTGGTGGTATCACAAGACATACGCC
CCCCAGGACAAGATCCGCGGTCCACGCTTTGAGAAAATGTTCCGGGCTTC
ccaaatggcgcgaaaatgcttccacctcttccggaccctggaggagctgg
agaagcTGCAGGCCCTGTGCGCCGACTCCAAGTCCCCGTTTTGGCGCCGA
AACCTCTTGAtggtgcgggcggcggcaaTGGCCATTTATTGGTACTATGA
CAACAcctgcttcctcatcaaCGCCAAGCTCTCCAGCTTCGACCAGCGGA
CGGCTGTGGCCCGAGACGGCGCGGCATGGACCCTAGCCAACCTGATCTCG
ATCGGACTGGCGCTCTACGACCTAGATCGCaacgggaaggagcgaaGTCG
CCTCGAGGATAAGGCGGCAGCGCTATTGAAGGCGCGTTCCAGCAACCATG
TAGTAGgcggggcggcggaggaaagggcgatggggagggacggaaaggtg
gaggcgaATGGGCATGGGCACAGCGACGCCCACggtaggaaggaaatgga
aaatggAACGCTCAcagccagcagcagcagtagtagtagcagcagcagcc
agcCGCAGGGGGGAGACacggtggcggaggcagacgtggaagagtcattg
gaggagatggcgcaGGCGAGCGTGAAGCGCTTCGACCTGGTCGGGGACCT
CATTCGGGTCTCGTGCGACTTCCTGGTGGCCTGCAACACCCCGGGCTTCG
ACTTGCCTCTGCACACGCTCGGGTTCCGGCTGCACGACGGCATCATCGGC
ACGGCGGGGCTGGTCTCGGCGCTCTTCGCGGTGTACAAGGCCTATCCCGC
GGATATGGGCCGCTTGCGGAAGCGCCGACTCATGCGCCTGCTGCCGACAG
GGCcttgaATGGCATCGCGCGTCCCAGCATCATGTTGTCGAAGGGGGCCG
TACAAAGACAACAGGGCCCTGACGGAGGTAGCTACTCCACCTTGTATTGT
GCGTGTCTCTCCCAATGGTGCGGAGGGCTTGACACGGCCCCTGGACCTTG
CGTATTGGCTTGGACTACAGGATTCATACAGCACGAAATTGCCTATCTCT
CTCAAGTCGGTGGTGGCGCTTATTCGGTCATTGGAGGGCCGAGACAAAGT
CAccaagACCATCCAGTACGCCTGCCGCTTCCTGTGGTGGTATCACAAGA
CATACGCCCCCCAGGACAAGATCCGCGGTCCACGCTTTGAGAAAATGTTC
CGGGCTTCccaaatggcgcgaaaatgcttccacctcttccggaccctgga
ggagctggagaagcTGCAGGCCCTGTGCGCCGACTCCAAGTCCCCGTTTT
GGCGCCGAAACCTCTTGAtggtgcgggcggcggcaaTGGCCATTTATTGG
TACTATGACAACAcctgcttcctcatcaaCGCCAAGCTCTCCAGCTTCGA
CCAGCGGACGGCTGTGGCCCGAGACGGCGCGGCATGGACCCTAGCCAACC
TGATCTCGATCGGACTGGCGCTCTACGACCTAGATCGCaacgggaaggag
cgaaGTCGCCTCGAGGATAAGGCGGCAGCGCTATTGAAGGCGCGTTCCAG
CAACCATGTAGTAGgcggggcggcggaggaaagggcgatggggagggacg
gaaaggtggaggcgaATGGGCATGGGCACAGCGACGCCCACggtaggaag
gaaatggaaaatggAACGCTCAcagccagcagcagcagtagtagtagcag
cagcagccagcCGCAGGGGGGAGACacggtggcggaggcagacgtggaag
agtcattggaggagatggcgcaGGCGAGCGTGAAGCGCTTCGACCTGGTC
GGGGACCTCATTCGGGTCTCGTGCGACTTCCTGGTGGCCTGCAACACCCC
GGGCTTCGACTTGCCTCTGCACACGCTCGGGTTCCGGCTGCACGACGGCA
TCATCGGCACGGCGGGGCTGGTCTCGGCGCTCTTCGCGGTGTACAAGGCC
TATCCCGCGGATATGGGCCGCTTGCGGAAGCGCCGACTCATGCGCCTGCT
GCCGACAGGGCcttga back to top
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