EWM23691.1, cds6975 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|585104845|gb|EWM23691.1| (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 796.193 bits (2055), Expect = 0.000e+0 Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query: 1 MASRVPASCCRRGPYKDNRALTEVATPPCIVRVSPNGAEGLTRPLDLAYWLGLQDSYSTKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAALLKARSSNHVVGGAAEERAMGRDGKVEANGHGHSDAHGRKEMENGTLTASSSSSSSSSSQPQGGDTVAEADVEESLEEMAQASVKRFDLVGDLIRVSCDFLVACNTPGFDLPLHTLGFRLHDGIIGTAGLVSALFAVYKAYPADMGRLRKRRLMRLLPTGP 385
MASRVPASCCRRGPYKDNRALTEVATPPCIVRVSPNGAEGLTRPLDLAYWLGLQDSYSTKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAALLKARSSNHVVGGAAEERAMGRDGKVEANGHGHSDAHGRKEMENGTLTASSSSSSSSSSQPQGGDTVAEADVEESLEEMAQASVKRFDLVGDLIRVSCDFLVACNTPGFDLPLHTLGFRLHDGIIGTAGLVSALFAVYKAYPADMGRLRKRRLMRLLPTGP
Sbjct: 1 MASRVPASCCRRGPYKDNRALTEVATPPCIVRVSPNGAEGLTRPLDLAYWLGLQDSYSTKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAALLKARSSNHVVGGAAEERAMGRDGKVEANGHGHSDAHGRKEMENGTLTASSSSSSSSSSQPQGGDTVAEADVEESLEEMAQASVKRFDLVGDLIRVSCDFLVACNTPGFDLPLHTLGFRLHDGIIGTAGLVSALFAVYKAYPADMGRLRKRRLMRLLPTGP 385
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|299470685|emb|CBN78625.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.383 bits (272), Expect = 1.197e-23 Identity = 81/304 (26.64%), Postives = 138/304 (45.39%), Query Frame = 0
Query: 53 LQDSYSTKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQAL-------CADSKSPF--WRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAALLKARSSNHVVGGAAEERAMGRDGKVEANGHGHSDAHGRKEMENGTLTASSSSSSSSSSQPQGGDTVAEADVEESLEEMAQASVKRFDLVGDLIRVSCDFLVACNTPGFDLPLHTLGFRLHDG 347
+ D+ + K +SL+S VA +R L+GRDK TK +QY RFL W+ + +D R K++R +Q +RK F + + L+E+ KL+ + A S++ F + L+ VR AM +W +DN +L + +F A +W++++ ++I L + L + K+R R + A ER D NG+G+S+ +E + + G+ E DV E + +A+ F +++ + D A N G D P LG +L+DG
Sbjct: 12 IDDALAVKEAVSLESFVATLRKLDGRDKFTKLMQYGARFLAWW---LSARDPDLSQRVFKLYRTTQRSRKAFRMLKILDEVVKLRQILRTAGGNSASSRTAFLGYAETLMSVRCLAMGAFWTFDNLNYLTITETVNFGVAKATRGFSRSWSVSSALAIMLGIDSLRKTEKKR-------------REALSAYAAAVSERIAPPDRCGHCNGNGNSNGESYGVVER--------------QRQRDGEGDGEGDVAGLREALRRANADHFKSWLMVLKGALDLTCAVNVTGMDFPKRLLGRKLNDG 285
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|325184731|emb|CCA19221.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 87.8113 bits (216), Expect = 3.821e-16 Identity = 60/207 (28.99%), Postives = 94/207 (45.41%), Query Frame = 0
Query: 44 PLDLAYWLGLQDSYSTKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLAN----LISIGLALYDLDRNGKERSRL------------EDKAAALLKARSSNHV 234
P D A+W +++++ +LEGRDK+TK +QY R L WY +A G F +++A+Q ARK F L ++ KL + + + RNL +++ M + YDN FL A + D+ AV + G W +AN L ++ L ++D R RL + + ALL+ RS N V
Sbjct: 6 PEDRAFW---------------NAIISVASTLEGRDKLTKLLQYGSRALSWY--CFASHTNKMGMGFSNLYKATQQARKVFRLGKSALLYAKLGTILEKKDTSQYERNLELIQQCGMMGFLAYDNIIFLSKANVVKLDEGKAVRQGGLLWFIANVAAFLRTVNLIKLNIDEENANRERLSFLSNADQTEVSQAQLDALLQTRSKNLV 195
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|146165094|ref|XP_001014394.2| (peroxisomal biogenesis factor 11 [Tetrahymena thermophila SB210] >gi|146145590|gb|EAR94149.2| peroxisomal biogenesis factor 11 [Tetrahymena thermophila SB210]) HSP 1 Score: 86.2705 bits (212), Expect = 6.878e-16 Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 0
Query: 69 VALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRL 218
+A I EGRDK K IQYA RFL W+ ++K RF +F + ARK F LF+T+ E++K+Q L + + L ++ A +YWY+DN L + K D + + W +A L+SI + +L ++ +E + L
Sbjct: 5 IAWINKTEGRDKFCKAIQYASRFLKWHFTN--TENKELAARFNGLFNGMKDARKLFRLFKTINEIQKIQELLNKKDNDEINKALNILVRAFFGLYWYFDNLVILKSVKFIHGDPKPDNKKGSTCWLIALLLSIAQNIRNLLKSLQEEANL 152
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|1173946907|gb|OQR95375.1| (hypothetical protein THRCLA_07924 [Thraustotheca clavata]) HSP 1 Score: 82.4185 bits (202), Expect = 2.280e-14 Identity = 76/295 (25.76%), Postives = 124/295 (42.03%), Query Frame = 0
Query: 68 VVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAALLKARSSNHVVGGAAEERAMGRDGKVEANGHGHSDAHGRKEMENGTLTASSSSSSSSSSQPQGGDTVAEADVEESLEEMAQASVKRFDLVGDLIRVSCDFLVACNTPGFDLPLHTLGFRLHDGIIGTAGLVSALFAVY 362
+V L LEGRDK+TK QYA R L ++ T P+ + G + +F+A Q ARK F + ++ K+ A + K +++NL +++ M ++ +DN F +AK+ D A+ G W AN+ + L L + + ++L H E + +T SS ++ Q D V A ++SL +++ +CD +V+ NT G LP LG +L+DGIIG G +SA +Y
Sbjct: 4 LVTLSNDLEGRDKLTKWTQYASRALAYWVLTADPKSPV-GQQLTALFKAVQSARKAFRVGKSFNYPAKITATIDNQKLDPFQKNLQLIQDLGMMTFFAFDNAAFFGSAKVLPIDSAQAMKNGGYFWFCANIAAFILNFQALQKEADKEAKL------------------------------------------HQILETKKAEMTLSSETADDLLKQI---DAVQSARWKKSLA---------------VLKTTCDLIVSSNTAGVRLPERILGKKLNDGIIGIVGCISASVVLY 237
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|954192863|gb|KRX05614.1| (hypothetical protein PPERSA_09754 [Pseudocohnilembus persalinus]) HSP 1 Score: 81.2629 bits (199), Expect = 5.140e-14 Identity = 68/301 (22.59%), Postives = 119/301 (39.53%), Query Frame = 0
Query: 65 LKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAALLKARSSNHVVGGAAEERAMGRDGKVEANGHGHSDAHGRKEMENGTLTASSSSSSSSSSQPQGGDTVAEADVEESLEEMAQASVKRFDLVGDLIRVSCDFLVACNTPGFDLPLHTLGFRLHDGIIGTAGLVSALFAVYKAY 365
L V+ ++ +GRDK+ K IQ C++L WY Y+ +K R + + ARK F LF+++ E+EKL L ++ L ++ A A YW++DN LI K ++ A W L + ALY +++N + +L+ +A+ + NG G ++++ +E + Q ++ +F +++ + D L A G + +G + G IG GLVSAL A Y+ +
Sbjct: 11 LTKVIGILNKTDGRDKLGKAIQNLCKYLNWY---YSTNNKDLADRMIGLSNGMRDARKLFRLFKSMNEIEKLIQLSQTDSPDVVKKALDVLARAFFAGYWFFDNLVILITVKFLKSNKEKATQTSNTFWFFGILFTQIQALYQINQNMQSLVQLKIEAS---------------------------KGNGQGE-------------------------------------EIQKKIENLKQNNITQFL---KIVQCTGDILAAG--TGSKIFERLVGKTPNSGTIGLGGLVSALIAGYQMF 239
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|675171419|ref|XP_008894594.1| (hypothetical protein PPTG_03656 [Phytophthora parasitica INRA-310] >gi|567984157|gb|ETL34532.1| hypothetical protein L916_13256 [Phytophthora parasitica] >gi|568043755|gb|ETM41023.1| hypothetical protein L914_13167 [Phytophthora parasitica] >gi|568106084|gb|ETN20720.1| hypothetical protein PPTG_03656 [Phytophthora parasitica INRA-310] >gi|970653377|gb|KUF91860.1| 50S ribosomal protein L19 [Phytophthora nicotianae] >gi|970664853|gb|KUG01661.1| Peroxisomal membrane protein 11 [Phytophthora nicotianae]) HSP 1 Score: 80.8777 bits (198), Expect = 1.127e-13 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 0
Query: 59 TKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAA 224
TK P+SL + + L LEGRDK++K +QY R L +Y + P+ + G R +++ Q +RK F L +++ +KLQ L + +R L ++ M Y+ DN F AK+ FD R G W AN+ AL L+ + ++ + D A+
Sbjct: 3 TKAPLSLDAFIKLAFCLEGRDKLSKMLQYGSRALAFYVLSADPKSDV-GQRLHALYKVMQQSRKAFRLGKSVTYYKKLQTLSSSKSLTETQRYLQFIQNLGMLGYFLADNVAFASKAKVLRFDADDLARRGGVMWFCANVAGFFNALESLNADVEKEKCVRDILAS 167
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|566018097|gb|ETI41008.1| (hypothetical protein F443_13717 [Phytophthora parasitica P1569] >gi|567955468|gb|ETK81101.1| hypothetical protein L915_13376 [Phytophthora parasitica] >gi|568013613|gb|ETL87790.1| hypothetical protein L917_13081 [Phytophthora parasitica] >gi|570321731|gb|ETO69679.1| hypothetical protein F444_13775 [Phytophthora parasitica P1976] >gi|570945525|gb|ETP10782.1| hypothetical protein F441_13646 [Phytophthora parasitica CJ01A1] >gi|570977302|gb|ETP38932.1| hypothetical protein F442_13568 [Phytophthora parasitica P10297]) HSP 1 Score: 80.8777 bits (198), Expect = 1.127e-13 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 0
Query: 59 TKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAA 224
TK P+SL + + L LEGRDK++K +QY R L +Y + P+ + G R +++ Q +RK F L +++ +KLQ L + +R L ++ M Y+ DN F AK+ FD R G W AN+ AL L+ + ++ + D A+
Sbjct: 3 TKAPLSLDAFIKLAFCLEGRDKLSKMLQYGSRALAFYVLSADPKSDV-GQRLHALYKVMQQSRKAFRLGKSVTYYKKLQTLSSSKSLTETQRYLQFIQNLGMLGYFLADNVAFASKAKVLRFDADDLARRGGVMWFCANVAGFFNALESLNADVEKEKCVRDILAS 167
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|813115146|ref|XP_012195417.1| (hypothetical protein SPRG_01660 [Saprolegnia parasitica CBS 223.65] >gi|641539986|gb|KDO33781.1| hypothetical protein SPRG_01660 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 80.1073 bits (196), Expect = 1.433e-13 Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 0
Query: 67 SVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLEDKAAA 224
+++AL LEGRDK+TK QY+ R L +Y P+ + G + +F+A+Q ARK F + ++ K+ A + ++RNL +V+ M ++ +DN F K+ + D A+ R G W AN+ LA L + + + L + AA
Sbjct: 4 TLLALSNDLEGRDKLTKLTQYSTRALAYYILAADPKS-VLGQQLTALFKATQSARKAFRVGKSFNYGNKISATLHNKAVAPYQRNLQLVQDVGMCTFFLFDNAAFFGANKVLNVDAAEAMKRGGYFWFCANVAGFVLAYEALQKETDKETDLHNTLAA 160
BLAST of EWM23691.1 vs. NCBI_GenBank
Match: gi|695452132|ref|XP_009535899.1| (hypothetical protein PHYSODRAFT_549873 [Phytophthora sojae] >gi|348669443|gb|EGZ09266.1| hypothetical protein PHYSODRAFT_549873 [Phytophthora sojae]) HSP 1 Score: 80.4925 bits (197), Expect = 1.462e-13 Identity = 49/162 (30.25%), Postives = 80/162 (49.38%), Query Frame = 0
Query: 59 TKLPISLKSVVALIRSLEGRDKVTKTIQYACRFLWWYHKTYAPQDKIRGPRFEKMFRASQMARKCFHLFRTLEELEKLQALCADSKSPFWRRNLLMVRAAAMAIYWYYDNTCFLINAKLSSFDQRTAVARDGAAWTLANLISIGLALYDLDRNGKERSRLED 220
TK P+SL + + L LEGRDK++K +QY R L +Y + P+ + G R +++ Q +RK F L +++ +KLQAL + + L V+ M Y+ DN F AK+ FD + G W AN+ A+ L+ + ++ + D
Sbjct: 3 TKAPVSLDAFIKLAFCLEGRDKLSKMLQYGSRALAFYILSADPKSDV-GQRLHALYKVMQQSRKAFRLGKSVTYYKKLQALSGNKSLSEGQSYLQFVQNVGMLGYFISDNVAFASKAKVLRFDAEELSKKGGILWFCANVAGFFNAVESLNADVEKEKCVRD 163 The following BLAST results are available for this feature:
BLAST of EWM23691.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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