|
|
Properties
| Property Name | Value |
|---|
| Product | derlin-like protein |
| Orig transcript id | gnl|cribi|Naga_100030g4.4162.mrna |
| Orig protein id | gnl|cribi|Naga_100030g4.4162 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:170198..171682 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6982 ID=rna6982|Name=rna6982|organism=Nannochloropsis gaditana|type=mRNA|length=1309bp
TTTATGGGGCCCGAAAGTCACGATTAGTGCATGCATGTGTTGTTGGCTGG
ACAAGCGATGTACTAGCACGCCGTAGTATCGTTTTCCTAGAATAACATGT
CCTCTTTTTCTGTGCTCAAAATCACAACTCCGACAGGAGATGCCACCTGC
CACAAATCAAGTAAGTTCACCACGGAGGTCAAGAGAGCCTCTATGGAGCT
TTATTGCTGCACACGCCATCTTGTGCATAAATCCAGCCAGGGCATTCCTG
ACGCCAACCTCTGCCATCGGCTCTCTTCCTTGTTCAACCTCATCGCCCTC
TCCCTTCGTCTCGCAAGCACGACCCTTTCCCGCCGGCAAACTCTGGTCAC
AGTGCCCGCCCACTTCACGCACATCTCCCACAAATAATGCCATCGAAATT
CGTCAGCCCCTCCTTCTTCCTGCGGCGGCACACTCACGCGACAGTTTCCT
CCGCTTTCTGCCGCGACCCCCGCCCTCCCTCTCCCCACCTCCCTCTCCTG
CCTCCCACCACATCCGCCGCATGTCCTTAAGCGACCTCTCGGCCGTCGTG
CTCCTAGCTGCACGTGAATTCACCCCTTTAAATGAATTAGCGGAATACGG
AGGCACCCCGTCCGGGGGCCTCGTGGAGGAGTTCGAAGCCTGGGGGCTGC
GGCAGAAAGTCCGATGGGGCATGCTGGCTAGATATTTATACCCGGACGAC
CACGAGGTGCTCTTGCTGGTGGAGGGCGAGGAGGGGGTATACAGAGGAAA
GCGAGGGAAGGAGGCAAGGGAGGGCGGAGGGGAGGGAGGCGCGGCGGGTC
TTCTTGGGATGGTCGAGCTCTCCCTGCAGCCCACGACGGGGCTGCCCCCC
CCCCCTCTTCCCCCTCTCCCCAGCCGTCAAGGGCCTCTTCGCCCTGCTGG
GTTGGCCTCTGCAGCCCTACATCTCCAATTTGCTCGTGGACGTGACAGTC
CGGCGCCAGGGCCACGCGGCGCGTTTGCTGGCCGTGGCCGAAGCCGAGGC
CCGGGCCCGGGGCCACTCTTGGGTCTACCTGCACGCCGACAGCGACTACC
TCCCGGCCGTGCGTCTCTACGAACGTCTGGGCTACCGAGACGTGGGCAGG
GGGAGGGCGTGGGTGGATAGGTGGACGGGTCTTCGCTTGCGGTACATGCG
GAAAGAACTGTGAGCGGGGAGGGAGGGAGGGGGGCCTCCCCCGTTGACCC
AACTGTGCATAACGGGCGTCATCGTAAAGAACGAAGCAATCCATTCGGAC
AAAGATCGTGAGGGACAGGATGGAATTGTAGCGTGGAGTCTTTGGTATCT
AGCACTTCC back to topprotein sequence of rna6982 >rna6982-protein ID=rna6982-protein|Name=rna6982|organism=Nannochloropsis gaditana|type=polypeptide|length=309bp
MPEDVEVSWYEDMFDWANVVPCIAMDGVATVTGIASSSLVPLQQVAGCFL
GKVCVRRAHKSVKWAAATPQEWFRNLPPITKAYLVAAFASTILSHFGVVG
VRTLVWDVAGLKRFQLWRLITPFTYFGDLGMQFVMQLFMLVQYSSRYELS
PFNTGGGGSSADYLLMLVFGAAALLLLNCYLGYYVLGGSLVSMVTYLWSC
REPHALVSFWGFTLPAMYLPWALAALSFLMGGTSAMISPLMGIGVGHLYY
FLIETLPLEYDVDLLKTPGFFVEAFEGPGERRGGRGEAAGPEGAGQSDWG
TGGRVLGGG back to topmRNA from alignment at CM002470.1:170198..171682- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6982 ID=rna6982|Name=rna6982|organism=Nannochloropsis gaditana|type=mRNA|length=1485bp|location=Sequence derived from alignment at CM002470.1:170198..171682- (Nannochloropsis gaditana)
ATGCCGGAAGACGTGGAGGTTTCCTGTAAGTGTGTTGCAGCCACCGCATG
GTTTGATGCATTGGGGCTAGTTAGTCGTGCGCGACCTCAAATTTCAGCCG
TCCCGTCATGAGAAAGAATAGTTGGGGGATGCTTCACGTCCTTTTTTCCT
CTGCCCATCTTGCTAAGGGTACGAGGACATGTTCGATTGGGCAAACGTGG
TACCTTGCATTGCCATGGATGGTGTTGCTACAGGTTTGTGCCCTTATGCG
GTTGCACGCCTGCCTTGGGACATATAGGCCTCATTCCCCTTCGTGGCCAC
CGGCCCCAAGTCACAGGGATCGCCTCGTCCTCCCTCGTGCCTCTTCAACA
GGTGGCTGGTTGCTTTCTCGGGAAAGTATGCGTCCGCCGCGCCCACAAAT
CCGTCAAGTGGGCGGCGGCAACTCCCCAGGTACGAGACGTAGGAGGCCTC
ACATTCCTCCCTGGCATCGTCTCACCCTCTCCCGTCCCTTGCCCTTCTCC
AGAGGAGTGGTTCCGGAACCTTCCCCCCATCACGAAGGCCTACCTCGTCG
CCGCCTTTGCCTCCACGATCCTCTCCCACTTTGGCGTCGTAGGTGTACGC
ACCCTGGTCTGGGACGTGGCGGGGCTGAAACGCTTTCAGGTAAGGGGAGA
CCGGGGGGACTCATGGGAGAGGGGAGACCGGGAGGTGGACAGGAAGTACG
TCGACGCGAGGATGCGAGGGGAGGGAATGGGTATGTGTATGCCTCGTTGT
TTTTCTCGAGGGCTGAGAGACGCATGGAGGCCGCCAGAGAAACCCCGCCC
GAGGGAAGAGGAAAGGAAGGGGAGGGGGGCTTTGACGGTTCCCCGCCTTG
TGACTGGCTGAGCGTCTCCTCCCTCCCTCCCTCATTCCCTCCTTCTCCAG
CTCTGGCGCCTGATCACCCCCTTCACCTATTTCGGGGATCTTGGCATGCA
ATTTGTGATGCAACTCTTCATGCTCGTCCAGTACTCGAGCCGCTACGAGC
TCTCCCCCTTCAACACGGGCGGGGGTGGTTCCTCGGCGGACTACCTGCTC
ATGCTCGTCTTCGGCGCGGCCGCCCTCCTCCTCCTGAACTGCTACCTCGG
GTACTACGTGCTCGGCGGCAGCCTGGTCAGCATGGTCACCTACCTCTGGT
CCTGCCGGGAGCCCCACGCGCTCGTCTCCTTCTGGGGCTTCACGCTCCCG
GCCATGTACCTGCCGTGGGCCCTGGCCGCCCTCTCCTTCCTGATGGGGGG
CACCTCGGCGATGATCAGCCCCCTGATGGGCATCGGCGTCGGGCATCTGT
ACTACTTCCTGATCGAGACCTTGCCTTTGGAGTACGATGTGGACCTGCTC
AAGACCCCAGGGTTCTTCGTGGAGGCCTTCGAGGGACCGGGGGAGAGAAG
GGGAGGGCGGGGGGAGGCTGCGGGGCCGGAGGGGGCAGGACAAAGCGACT
GGGGTACAGGAGGGCGAGTCTTAGGGGGGGGGTAA back to topCoding sequence (CDS) from alignment at CM002470.1:170198..171682- >rna6982 ID=rna6982|Name=rna6982|organism=Nannochloropsis gaditana|type=CDS|length=4650bp|location=Sequence derived from alignment at CM002470.1:170198..171682- (Nannochloropsis gaditana)
CTCTGGCGCCTGATCACCCCCTTCACCTATTTCGGGGATCTTGGCATGCA
ATTTGTGATGCAACTCTTCATGCTCGTCCAGTACTCGAGCCGCTACGAGC
TCTCCCCCTTCAACACGGGCGGGGGTGGTTCCTCGGCGGACTACCTGCTC
ATGCTCGTCTTCGGCGCGGCCGCCCTCCTCCTCCTGAACTGCTACCTCGG
GTACTACGTGCTCGGCGGCAGCCTGGTCAGCATGGTCACCTACCTCTGGT
CCTGCCGGGAGCCCCACGCGCTCGTCTCCTTCTGGGGCTTCACGCTCCCG
GCCATGTACCTGCCGTGGGCCCTGGCCGCCCTCTCCTTCCTGATGGGGGG
CACCTCGGCGATGATCAGCCCCCTGATGGGCATCGGCGTCGGGCATCTGT
ACTACTTCCTGATCGAGACCTTGCCTTTGGAGTACGATGTGGACCTGCTC
AAGACCCCAGGGTTCTTCGTGGAGGCCTTCGAGGGACCGGGGGAGAGAAG
GGGAGGGCGGGGGGAGGCTGCGGGGCCGGAGGGGGCAGGACAAAGCGACT
GGGGTACAGGAGGGCGAGTCTTAGGGGGGGGGTAAGAGTGGTTCCGGAAC
CTTCCCCCCATCACGAAGGCCTACCTCGTCGCCGCCTTTGCCTCCACGAT
CCTCTCCCACTTTGGCGTCGTAGGTGTACGCACCCTGGTCTGGGACGTGG
CGGGGCTGAAACGCTTTCAGTCACAGGGATCGCCTCGTCCTCCCTCGTGC
CTCTTCAACAGGTGGCTGGTTGCTTTCTCGGGAAAGTATGCGTCCGCCGC
GCCCACAAATCCGTCAAGTGGGCGGCGGCAACTCCCCAGGGTACGAGGAC
ATGTTCGATTGGGCAAACGTGGTACCTTGCATTGCCATGGATGGTGTTGC
TACAGATGCCGGAAGACGTGGAGGTTTCCTCTCTGGCGCCTGATCACCCC
CTTCACCTATTTCGGGGATCTTGGCATGCAATTTGTGATGCAACTCTTCA
TGCTCGTCCAGTACTCGAGCCGCTACGAGCTCTCCCCCTTCAACACGGGC
GGGGGTGGTTCCTCGGCGGACTACCTGCTCATGCTCGTCTTCGGCGCGGC
CGCCCTCCTCCTCCTGAACTGCTACCTCGGGTACTACGTGCTCGGCGGCA
GCCTGGTCAGCATGGTCACCTACCTCTGGTCCTGCCGGGAGCCCCACGCG
CTCGTCTCCTTCTGGGGCTTCACGCTCCCGGCCATGTACCTGCCGTGGGC
CCTGGCCGCCCTCTCCTTCCTGATGGGGGGCACCTCGGCGATGATCAGCC
CCCTGATGGGCATCGGCGTCGGGCATCTGTACTACTTCCTGATCGAGACC
TTGCCTTTGGAGTACGATGTGGACCTGCTCAAGACCCCAGGGTTCTTCGT
GGAGGCCTTCGAGGGACCGGGGGAGAGAAGGGGAGGGCGGGGGGAGGCTG
CGGGGCCGGAGGGGGCAGGACAAAGCGACTGGGGTACAGGAGGGCGAGTC
TTAGGGGGGGGGTAAGAGTGGTTCCGGAACCTTCCCCCCATCACGAAGGC
CTACCTCGTCGCCGCCTTTGCCTCCACGATCCTCTCCCACTTTGGCGTCG
TAGGTGTACGCACCCTGGTCTGGGACGTGGCGGGGCTGAAACGCTTTCAG
TCACAGGGATCGCCTCGTCCTCCCTCGTGCCTCTTCAACAGGTGGCTGGT
TGCTTTCTCGGGAAAGTATGCGTCCGCCGCGCCCACAAATCCGTCAAGTG
GGCGGCGGCAACTCCCCAGGGTACGAGGACATGTTCGATTGGGCAAACGT
GGTACCTTGCATTGCCATGGATGGTGTTGCTACAGATGCCGGAAGACGTG
GAGGTTTCCTCTCTGGCGCCTGATCACCCCCTTCACCTATTTCGGGGATC
TTGGCATGCAATTTGTGATGCAACTCTTCATGCTCGTCCAGTACTCGAGC
CGCTACGAGCTCTCCCCCTTCAACACGGGCGGGGGTGGTTCCTCGGCGGA
CTACCTGCTCATGCTCGTCTTCGGCGCGGCCGCCCTCCTCCTCCTGAACT
GCTACCTCGGGTACTACGTGCTCGGCGGCAGCCTGGTCAGCATGGTCACC
TACCTCTGGTCCTGCCGGGAGCCCCACGCGCTCGTCTCCTTCTGGGGCTT
CACGCTCCCGGCCATGTACCTGCCGTGGGCCCTGGCCGCCCTCTCCTTCC
TGATGGGGGGCACCTCGGCGATGATCAGCCCCCTGATGGGCATCGGCGTC
GGGCATCTGTACTACTTCCTGATCGAGACCTTGCCTTTGGAGTACGATGT
GGACCTGCTCAAGACCCCAGGGTTCTTCGTGGAGGCCTTCGAGGGACCGG
GGGAGAGAAGGGGAGGGCGGGGGGAGGCTGCGGGGCCGGAGGGGGCAGGA
CAAAGCGACTGGGGTACAGGAGGGCGAGTCTTAGGGGGGGGGTAAGAGTG
GTTCCGGAACCTTCCCCCCATCACGAAGGCCTACCTCGTCGCCGCCTTTG
CCTCCACGATCCTCTCCCACTTTGGCGTCGTAGGTGTACGCACCCTGGTC
TGGGACGTGGCGGGGCTGAAACGCTTTCAGTCACAGGGATCGCCTCGTCC
TCCCTCGTGCCTCTTCAACAGGTGGCTGGTTGCTTTCTCGGGAAAGTATG
CGTCCGCCGCGCCCACAAATCCGTCAAGTGGGCGGCGGCAACTCCCCAGG
GTACGAGGACATGTTCGATTGGGCAAACGTGGTACCTTGCATTGCCATGG
ATGGTGTTGCTACAGATGCCGGAAGACGTGGAGGTTTCCTCTCTGGCGCC
TGATCACCCCCTTCACCTATTTCGGGGATCTTGGCATGCAATTTGTGATG
CAACTCTTCATGCTCGTCCAGTACTCGAGCCGCTACGAGCTCTCCCCCTT
CAACACGGGCGGGGGTGGTTCCTCGGCGGACTACCTGCTCATGCTCGTCT
TCGGCGCGGCCGCCCTCCTCCTCCTGAACTGCTACCTCGGGTACTACGTG
CTCGGCGGCAGCCTGGTCAGCATGGTCACCTACCTCTGGTCCTGCCGGGA
GCCCCACGCGCTCGTCTCCTTCTGGGGCTTCACGCTCCCGGCCATGTACC
TGCCGTGGGCCCTGGCCGCCCTCTCCTTCCTGATGGGGGGCACCTCGGCG
ATGATCAGCCCCCTGATGGGCATCGGCGTCGGGCATCTGTACTACTTCCT
GATCGAGACCTTGCCTTTGGAGTACGATGTGGACCTGCTCAAGACCCCAG
GGTTCTTCGTGGAGGCCTTCGAGGGACCGGGGGAGAGAAGGGGAGGGCGG
GGGGAGGCTGCGGGGCCGGAGGGGGCAGGACAAAGCGACTGGGGTACAGG
AGGGCGAGTCTTAGGGGGGGGGTAAGAGTGGTTCCGGAACCTTCCCCCCA
TCACGAAGGCCTACCTCGTCGCCGCCTTTGCCTCCACGATCCTCTCCCAC
TTTGGCGTCGTAGGTGTACGCACCCTGGTCTGGGACGTGGCGGGGCTGAA
ACGCTTTCAGTCACAGGGATCGCCTCGTCCTCCCTCGTGCCTCTTCAACA
GGTGGCTGGTTGCTTTCTCGGGAAAGTATGCGTCCGCCGCGCCCACAAAT
CCGTCAAGTGGGCGGCGGCAACTCCCCAGGGTACGAGGACATGTTCGATT
GGGCAAACGTGGTACCTTGCATTGCCATGGATGGTGTTGCTACAGATGCC
GGAAGACGTGGAGGTTTCCTCTCTGGCGCCTGATCACCCCCTTCACCTAT
TTCGGGGATCTTGGCATGCAATTTGTGATGCAACTCTTCATGCTCGTCCA
GTACTCGAGCCGCTACGAGCTCTCCCCCTTCAACACGGGCGGGGGTGGTT
CCTCGGCGGACTACCTGCTCATGCTCGTCTTCGGCGCGGCCGCCCTCCTC
CTCCTGAACTGCTACCTCGGGTACTACGTGCTCGGCGGCAGCCTGGTCAG
CATGGTCACCTACCTCTGGTCCTGCCGGGAGCCCCACGCGCTCGTCTCCT
TCTGGGGCTTCACGCTCCCGGCCATGTACCTGCCGTGGGCCCTGGCCGCC
CTCTCCTTCCTGATGGGGGGCACCTCGGCGATGATCAGCCCCCTGATGGG
CATCGGCGTCGGGCATCTGTACTACTTCCTGATCGAGACCTTGCCTTTGG
AGTACGATGTGGACCTGCTCAAGACCCCAGGGTTCTTCGTGGAGGCCTTC
GAGGGACCGGGGGAGAGAAGGGGAGGGCGGGGGGAGGCTGCGGGGCCGGA
GGGGGCAGGACAAAGCGACTGGGGTACAGGAGGGCGAGTCTTAGGGGGGG
GGTAAGAGTGGTTCCGGAACCTTCCCCCCATCACGAAGGCCTACCTCGTC
GCCGCCTTTGCCTCCACGATCCTCTCCCACTTTGGCGTCGTAGGTGTACG
CACCCTGGTCTGGGACGTGGCGGGGCTGAAACGCTTTCAGTCACAGGGAT
CGCCTCGTCCTCCCTCGTGCCTCTTCAACAGGTGGCTGGTTGCTTTCTCG
GGAAAGTATGCGTCCGCCGCGCCCACAAATCCGTCAAGTGGGCGGCGGCA
ACTCCCCAGGGTACGAGGACATGTTCGATTGGGCAAACGTGGTACCTTGC
ATTGCCATGGATGGTGTTGCTACAGATGCCGGAAGACGTGGAGGTTTCCT back to top
|