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Properties
| Property Name | Value |
|---|
| Product | trna (adenine-n -)-methyltransferase non-catalytic subunit trm6 |
| Orig transcript id | gnl|cribi|Naga_100030g2.4195.mrna |
| Orig protein id | gnl|cribi|Naga_100030g2.4195 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:166815..168502 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6980 ID=rna6980|Name=rna6980|organism=Nannochloropsis gaditana|type=mRNA|length=647bp
ATAAAAAAATCTGACCACCGCACACATGCCCACGCAGCAAAACAGCTTGT
ACCACAGGTGACAGCCCTCGCTTAGGCGTCCGCCAGGAATGGTGGTGCCG
CAAGACATGCAAGGCCCTCGGCGTCTGCGGAGTTCCCCGACTCGGACTAT
CACCCTGTACACCGCCCTCCTCCTCCTTGGGGGGGTGGAAGGAAGTGAAA
TGCACGGTACGGTCGGAGGAGGATGGAGTCTGCATAGTGCTGGCGGAGGC
GTGGATCTCTCACGCGTGATTCTGTCTTTCTTACAGCTCCTGCGTGCCGC
GCTCGACCATCGCGTCAGAAAGCCGTCCCCCCGGCTTTCCTGCACACTCC
ATTATGCTCTTCTTCTTCCAGCGTCCATGCATCCTCTATCTCACCGCATC
CCAAGTATATAGACTTCCGTCCCGTGCGTATAGCCCCGCTTAGCGCGCGG
GGGTGGGGTTCCGGGGGGGGAGCTGGCGGGCGTGGGAGGGGAAACGGCTT
CAACGATGATGAGGACGACAACGACGAGATCGCTCGAGAGGTGTCCGTGT
TGGAGGCAGAACAAGCGCGGATCATGGCGGAGTTAGAAGCGGCGCGACTC
AAAGCTCAGCTGGCTAAGCTGCAGCAAGAGCAAGCGGGACGGGGGGG back to topprotein sequence of rna6980 >rna6980-protein ID=rna6980-protein|Name=rna6980|organism=Nannochloropsis gaditana|type=polypeptide|length=511bp
MAASASSPLPSPSSPPPSASPPAVIQEGAWVILQMGDGRNFFACAQQKGM
MRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGN
DFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAII
QALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVK
SGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGE
GKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRR
AEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQE
DFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRL
LAFLEDGAAFAVYHEYLEPLVALYASLMEAGMLRLQMLSTWWREYQILPG
RSHPHMSMSSDGGYLLTGIKVSQGEAGQREGGGEEERQGQEGEKSSGKEG
GGNRKRHRNQR back to topmRNA from alignment at CM002470.1:166815..168502+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6980 ID=rna6980|Name=rna6980|organism=Nannochloropsis gaditana|type=mRNA|length=1688bp|location=Sequence derived from alignment at CM002470.1:166815..168502+ (Nannochloropsis gaditana)
ccttcctactcCACAAGGACACGAAAATGCTCACCCGGCGAGACTTTTTT
CCTGTATACACACCACTAGACTGAGCACATCCGAATTGAGGGCGTCGTGG
CGACAGCGGCGTTACCATCATGGCCGcaagcgcctcctcccctctcccct
ccccgtcttcacctcccccctctgcctcgccccccgcagTCATTCAGGAA
GGCGCCTGGGTCATCTTACAGATGGGCGACGGCCGCAATTTTTTTGCCTG
CGCACAACAGAAAGGAATGATGCGTCTGGGCCGTGTTACCATCTCGCTCA
GCGGCTTGATCGGTGTGCCGTACGGAAGCGTCCTGGAGGTCCATCCTGAT
CGCCTCGTGCCCCTGCCCGGCACCACAGAGCTCTATGAGGACCTGTCCGT
CGGTGACATGGACGGGAACGATTTTGCACGCGGTGGGGCCCCGCTCGGGG
AATACGATGGAGTCAGCCTGGATAACCGGGATTTCGCCGACACGAACACA
GCCCAGCGTctgagcatggaggaggtggaggagctgaagcgGAGCGGGGC
CTCGGGACAGGCAATTATTCAGGCGCTCGCCTCCAATTCCGACACCTGGG
AGAAGAAAACGGCCTTTGCCAAGCAGAAGTGGACGCAGAAAAAGGCACAC
AAATACGTGGTTCGCGTCCGGGCATTGGCTGGGTGTGGGAGCAACGTCGC
GGAAGCCCTCTTCGTCAAGTCCGGGCTGGTGAAAACGACGGCCATCCGCC
CCGACAGCATTGCCCAACTCCTTTCTTTCGGCAATGTGGCAGCGGGTGCC
CGTGTCCTGGTTTTGGACTCGTACTCGGGAGTGGTGTTGGGCTGCATCCT
GGAGCGCCTGGGGGGTGAGGGGAAAGCCATAAGTCTCTACGCGGGCGCGC
AGGCGCACATTGACCATCTAAAATATTTCAACCTTCCTACGGACCAGCTC
GCTCAGACGCTCGTGCATTTTCCGGCATCTGCGCTGGCGGAgttggaggt
agggagggctcggcggagggcggaagggggggagggcggggaggaggagg
atgccagGTTCTTGGCCAcggccgaggaagaagcgagggcTAGGGCATCG
GGGAAATTTGTATTGCACAcgacaagggagggcgaggggcagggggagga
gaaagcggccgGGCAGGAAGATTTCGACCGAGCCAAGTGGTTGAAGTACC
TGGAGAAAAAGCGGCGTCGACTCTGCGTCTTGGCGGAAGGGCGGAGATTG
CTGATAGAGGGCGCCGACTGCTTGGTTGTGGCCAGCCGGCACGATCCTTC
CGTTGTGGTCCCTCGCTTGCTCGCTTTCCTGGAGGACGGCGCGGCCTTCG
CGGTCTACCATGAGTATCTCGAGCCTTTGGTGGCCTTATACGCCTCCTTG
ATGGAGGCCGGCATGCTACGACTGCAGATGCTGAGCACCTGGTGGCGCGA
ATACCAGATCTTGCCAGGCAGGTCGCACCCCCACATGAGTATGAGCAGTG
ACGGTGGGTACCTCTTGACTGGTATTAAGGTCAGTCAAGGCGAGgcaggg
caaagggagggaggaggggaggaggagaggcagggacaggagggggagaa
aagttcggggaaggaaggcggcggcaaTAGGAAGAGGCACAGAAATCAAA
GATAGCTGACAAAGAAAACAGAAACGTTGTATCAAGTA back to topCoding sequence (CDS) from alignment at CM002470.1:166815..168502+ >rna6980 ID=rna6980|Name=rna6980|organism=Nannochloropsis gaditana|type=CDS|length=1536bp|location=Sequence derived from alignment at CM002470.1:166815..168502+ (Nannochloropsis gaditana)
ATGGCCGcaagcgcctcctcccctctcccctccccgtcttcacctccccc
ctctgcctcgccccccgcagTCATTCAGGAAGGCGCCTGGGTCATCTTAC
AGATGGGCGACGGCCGCAATTTTTTTGCCTGCGCACAACAGAAAGGAATG
ATGCGTCTGGGCCGTGTTACCATCTCGCTCAGCGGCTTGATCGGTGTGCC
GTACGGAAGCGTCCTGGAGGTCCATCCTGATCGCCTCGTGCCCCTGCCCG
GCACCACAGAGCTCTATGAGGACCTGTCCGTCGGTGACATGGACGGGAAC
GATTTTGCACGCGGTGGGGCCCCGCTCGGGGAATACGATGGAGTCAGCCT
GGATAACCGGGATTTCGCCGACACGAACACAGCCCAGCGTctgagcatgg
aggaggtggaggagctgaagcgGAGCGGGGCCTCGGGACAGGCAATTATT
CAGGCGCTCGCCTCCAATTCCGACACCTGGGAGAAGAAAACGGCCTTTGC
CAAGCAGAAGTGGACGCAGAAAAAGGCACACAAATACGTGGTTCGCGTCC
GGGCATTGGCTGGGTGTGGGAGCAACGTCGCGGAAGCCCTCTTCGTCAAG
TCCGGGCTGGTGAAAACGACGGCCATCCGCCCCGACAGCATTGCCCAACT
CCTTTCTTTCGGCAATGTGGCAGCGGGTGCCCGTGTCCTGGTTTTGGACT
CGTACTCGGGAGTGGTGTTGGGCTGCATCCTGGAGCGCCTGGGGGGTGAG
GGGAAAGCCATAAGTCTCTACGCGGGCGCGCAGGCGCACATTGACCATCT
AAAATATTTCAACCTTCCTACGGACCAGCTCGCTCAGACGCTCGTGCATT
TTCCGGCATCTGCGCTGGCGGAgttggaggtagggagggctcggcggagg
gcggaagggggggagggcggggaggaggaggatgccagGTTCTTGGCCAc
ggccgaggaagaagcgagggcTAGGGCATCGGGGAAATTTGTATTGCACA
cgacaagggagggcgaggggcagggggaggagaaagcggccgGGCAGGAA
GATTTCGACCGAGCCAAGTGGTTGAAGTACCTGGAGAAAAAGCGGCGTCG
ACTCTGCGTCTTGGCGGAAGGGCGGAGATTGCTGATAGAGGGCGCCGACT
GCTTGGTTGTGGCCAGCCGGCACGATCCTTCCGTTGTGGTCCCTCGCTTG
CTCGCTTTCCTGGAGGACGGCGCGGCCTTCGCGGTCTACCATGAGTATCT
CGAGCCTTTGGTGGCCTTATACGCCTCCTTGATGGAGGCCGGCATGCTAC
GACTGCAGATGCTGAGCACCTGGTGGCGCGAATACCAGATCTTGCCAGGC
AGGTCGCACCCCCACATGAGTATGAGCAGTGACGGTGGGTACCTCTTGAC
TGGTATTAAGGTCAGTCAAGGCGAGgcagggcaaagggagggaggagggg
aggaggagaggcagggacaggagggggagaaaagttcggggaaggaaggc
ggcggcaaTAGGAAGAGGCACAGAAATCAAAGATAG back to top
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