EWM23698.1, cds6964 (CDS) Nannochloropsis gaditana

Overview
NameEWM23698.1
Unique Namecds6964
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:166934..168469 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23698.1
Producttrna (adenine-n -)-methyltransferase non-catalytic subunit trm6
Orig transcript idgnl|cribi|Naga_100030g2.4195.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:166934..168469 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0031515tRNA (m1A) methyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0030488tRNA methylation
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR017423TRM6
Homology
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|585104852|gb|EWM23698.1| (trna (adenine-n -)-methyltransferase non-catalytic subunit trm6 [Nannochloropsis gaditana])

HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0
Query:    1 MAASASSPLPSPSSPPPSASPPAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKVSQGEAGQREGGGEEERQGQEGEKSSGKEGGGNRKRHRNQR 511
            MAASASSPLPSPSSPPPSASPPAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKVSQGEAGQREGGGEEERQGQEGEKSSGKEGGGNRKRHRNQR
Sbjct:    1 MAASASSPLPSPSSPPPSASPPAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKVSQGEAGQREGGGEEERQGQEGEKSSGKEGGGNRKRHRNQR 511          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|553182826|ref|XP_005853789.1| (hypothetical protein NGA_2025000, partial [Nannochloropsis gaditana CCMP526] >gi|422295270|gb|EKU22569.1| hypothetical protein NGA_2025000, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
Query:    1 MAASASSPLPSPSSPPPSASPPAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLA 278
            MAASASSPLPSPSSPPPSASPPAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLA
Sbjct:    1 MAASASSPLPSPSSPPPSASPPAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLA 278          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|553182829|ref|XP_005853790.1| (trna (adenine-n -)-methyltransferase non-catalytic subunit trm6, partial [Nannochloropsis gaditana CCMP526] >gi|422295271|gb|EKU22570.1| trna (adenine-n -)-methyltransferase non-catalytic subunit trm6, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 363.614 bits (932), Expect = 7.578e-122
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:  311 DARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKVSQGEAGQREGGGEEERQ 488
            DARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKVSQGEAGQREGGGEEERQ
Sbjct:    1 DARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKVSQGEAGQREGGGEEERQ 178          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|567945538|gb|ETK71349.1| (hypothetical protein L915_21397 [Phytophthora parasitica] >gi|567974190|gb|ETL24791.1| hypothetical protein L916_21266 [Phytophthora parasitica] >gi|568003668|gb|ETL78013.1| hypothetical protein L917_21114 [Phytophthora parasitica] >gi|568033578|gb|ETM31278.1| hypothetical protein L914_21128 [Phytophthora parasitica] >gi|570935508|gb|ETP00765.1| hypothetical protein F441_21883 [Phytophthora parasitica CJ01A1] >gi|570965797|gb|ETP28916.1| hypothetical protein F442_21857 [Phytophthora parasitica P10297])

HSP 1 Score: 236.113 bits (601), Expect = 2.690e-68
Identity = 173/458 (37.77%), Postives = 241/458 (52.62%), Query Frame = 0
Query:   22 PAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKK-RRRLCVLAEGRRLLI-----EGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASL--MEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKV 471
            P VI EG  VI Q  DGR FF    +   +R+G+   +L  +IG  YG++ E    +LV + G   L+ D  V    G+ F   G           DNR +ADTN+AQ L   ++ EL+  GASG+ IIQ L  NS TWE KT F+KQK+ +KK  KY+ RVR L     ++     +K+   K   +R DS+ Q+L +GN+ AG +VLV+D+  G+V G I ER GG G+ I  Y G Q   D L+ FN     L +++ + P   +  LE+             EEED        E A+    G     T  E E    E+A   ++F   +  +Y EKK RR    L   +   I     E +D LV+A+ +DP  V+  LL +L     F VY E+LEPL   +A+L  MEA ++ LQ+  TW RE Q+LPGR+HP M+MS+  GYLL+GIK+
Sbjct:   23 PYVIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTGG--LFPD-PVAPETGDGFVPDG-----------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTL-ESIHYMPFKQVRLLEM-------------EEEDVV------EPAKVARDG----LTPEEREQLAAERA---KNFTPEQQKRYAEKKARREQTKLFRQKPSTIREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEA-IIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 437          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|675212573|ref|XP_008915171.1| (hypothetical protein PPTG_18823 [Phytophthora parasitica INRA-310] >gi|568084626|gb|ETM99552.1| hypothetical protein PPTG_18823 [Phytophthora parasitica INRA-310])

HSP 1 Score: 236.113 bits (601), Expect = 3.119e-68
Identity = 174/458 (37.99%), Postives = 241/458 (52.62%), Query Frame = 0
Query:   22 PAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKK-RRRLCVLAEGRRLLI-----EGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASL--MEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKV 471
            P VI EG  VI Q  DGR FF    +   +R+G+   +L  +IG  YG+V E    +LV + G   L+ D  V    G+ F   G           DNR +ADTN+AQ L   ++ EL+  GASG+ IIQ L  NS TWE KT F+KQK+ +KK  KY+ RVR L     ++     +K+   K   +R DS+ Q+L +GN+ AG +VLV+D+  G+V G I ER GG G+ I  Y G Q   D L+ FN     L +++ + P   +  LE+             EEED        E A+    G     T  E E    E+A   ++F   +  +Y EKK RR    L   +   I     E +D LV+A+ +DP  V+  LL +L     F VY E+LEPL   +A+L  MEA ++ LQ+  TW RE Q+LPGR+HP M+MS+  GYLL+GIK+
Sbjct:   23 PYVIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAVFEEQNKKLVKVTGG--LFPD-PVAPETGDGFVPDG-----------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTL-ESIHYMPFKQVRLLEM-------------EEEDVV------EPAKVARDG----LTPEEREQLAAERA---KNFTPEQQKRYAEKKARREQTKLFRQKPSTIREWAREKSDSLVIAASYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEA-IIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 437          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|566008051|gb|ETI30962.1| (hypothetical protein F443_21994 [Phytophthora parasitica P1569])

HSP 1 Score: 235.728 bits (600), Expect = 3.853e-68
Identity = 173/458 (37.77%), Postives = 241/458 (52.62%), Query Frame = 0
Query:   22 PAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKK-RRRLCVLAEGRRLLI-----EGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASL--MEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKV 471
            P VI EG  VI Q  DGR FF    +   +R+G+   +L  +IG  YG++ E    +LV + G   L+ D  V    G+ F   G           DNR +ADTN+AQ L   ++ EL+  GASG+ IIQ L  NS TWE KT F+KQK+ +KK  KY+ RVR L     ++     +K+   K   +R DS+ Q+L +GN+ AG +VLV+D+  G+V G I ER GG G+ I  Y G Q   D L+ FN     L +++ + P   +  LE+             EEED        E A+    G     T  E E    E+A   ++F   +  +Y EKK RR    L   +   I     E +D LV+A+ +DP  V+  LL +L     F VY E+LEPL   +A+L  MEA ++ LQ+  TW RE Q+LPGR+HP M+MS+  GYLL+GIK+
Sbjct:   23 PYVIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTGG--LFPD-PVAPETGDGFVPDG-----------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTL-ESIHYMPFKQVRLLEM-------------EEEDVV------EPAKVARDG----LTPEEREQLAAERA---KNFTPEQQKRYAEKKARREHTKLFRQKPSTIREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEA-IIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 437          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|325190588|emb|CCA25085.1| (tRNA (adenineN(1))methyltransferase noncatalytic subunit trm6 putative [Albugo laibachii Nc14])

HSP 1 Score: 234.958 bits (598), Expect = 3.971e-68
Identity = 153/453 (33.77%), Postives = 228/453 (50.33%), Query Frame = 0
Query:   24 VIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAE-EEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEG--RRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEAG-MLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKVS 472
            +I +G  VI +  DGR FF     K  +R+ +   SL+ +IG  YGS  E    +LV + G   L+ D    +     F     PL        DNR + DTN+AQ+LS E + EL+  GA+G+ II+AL  NS TW+ +T F+KQK+ +KK  KY+ RV  L     ++ +   +K+   K   +R D++ Q+L + N+ A ++ LVLD+  G+VLG I ER  G G+ ++ Y G    +D L+ FN     LA ++  F     A L+               EED   +A AE  E +     K  +   R  +   EE+   +        LK L +   R+        R  + E +D L++AS +D       L+ +L D   F +Y EYLEP+   ++S  +   ++ LQ+  TW R YQILPGRSHP M+MS   GYLLTG K++
Sbjct:   26 IIHDGDTVICEASDGRMFFQLVAAKECIRISKTLTSLTPVIGAAYGSTFEYQNQKLVKVSGG--LFPDPVTPE-----FGEAIVPL-------CDNRHYTDTNSAQKLSSESIAELRSQGATGKEIIEALVENSATWKDRTEFSKQKYLRKKQTKYMPRVHILKCTAESLCKTYRLKNP-DKIRYLREDTLGQILVYANIYATSQALVLDTCMGLVLGAIAERQDGNGRILAPYIGQNPCVDILRRFNFDRKSLA-SIHSFSFEEFALLD-------------QREED---IAEAEASEPKLTEEEKNKMEQERTKQYTEEERKKHE--------LKKLRRNHNRIIRQPRAVIRNWIREKSDVLILASEYDLESTFITLMPYLGDSRPFVIYSEYLEPVTKAFSSFQKMDTLIDLQLTETWTRRYQILPGRSHPEMNMSGCSGYLLTGTKIA 438          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|570311745|gb|ETO59693.1| (hypothetical protein F444_22014 [Phytophthora parasitica P1976])

HSP 1 Score: 235.728 bits (600), Expect = 4.374e-68
Identity = 173/458 (37.77%), Postives = 241/458 (52.62%), Query Frame = 0
Query:   22 PAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKK-RRRLCVLAEGRRLLI-----EGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASL--MEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKV 471
            P VI EG  VI Q  DGR FF    +   +R+G+   +L  +IG  YG++ E    +LV + G   L+ D  V    G+ F   G           DNR +ADTN+AQ L   ++ EL+  GASG+ IIQ L  NS TWE KT F+KQK+ +KK  KY+ RVR L     ++     +K+   K   +R DS+ Q+L +GN+ AG +VLV+D+  G+V G I ER GG G+ I  Y G Q   D L+ FN     L +++ + P   +  LE+             EEED        E A+    G     T  E E    E+A   ++F   +  +Y EKK RR    L   +   I     E +D LV+A+ +DP  V+  LL +L     F VY E+LEPL   +A+L  MEA ++ LQ+  TW RE Q+LPGR+HP M+MS+  GYLL+GIK+
Sbjct:   23 PYVIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTGG--LFPD-PVAPETGDGFVPDG-----------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTL-ESIHYMPFKQVRLLEM-------------EEEDVV------EPAKVARDG----LTPEEREQLAAERA---KNFTPEQQKRYAEKKARREQTKLFRQKPSTIREWAREKSDSLVIAASYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEA-IIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 437          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|1214690636|gb|OWZ05798.1| (TRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6 [Phytophthora megakarya])

HSP 1 Score: 235.343 bits (599), Expect = 4.923e-68
Identity = 172/458 (37.55%), Postives = 240/458 (52.40%), Query Frame = 0
Query:   22 PAVIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAPLGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRARRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVL------AEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASL--MEAGMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKV 471
            P VI EG  VI Q  DGR FF    +   +R+G+   +L  +IG  YG++ E    +LV + G   L+ D  V    G  F   G           DNR +ADTN+AQ L   ++ EL+  GASG+ IIQ L  NS TWE KT F+KQK+ +KK  KY+ RVR L     ++     +K+   K   +R DS+ Q+L +GN+ AG RVLV+D+  G+V G I ER GG G  I  Y G Q   D L+ FN     L +++ + P   +  LE+             EEED   +  A + AR          T  E E    E+A   ++F   +  +Y EKK RR          +  R+   E +D LV+A+ +DP  ++  LL FL     F +Y E+LEPL   +A+L  MEA ++ LQ+  TW RE Q+LPGR+HP M+MS+  GYLL+GIK+
Sbjct:   16 PYVIYEGDTVICQTSDGRMFFQAVTKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTGG--LFPD-PVAPETGESFVPDG-----------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGRVLVVDTCMGLVAGSIAERQGGSGCIICPYEGQQPAADILRRFNFDKKTL-ESIHYMPFKQVRMLEM-------------EEED---VVEAPKVARDGL-------TPEERELLAAERA---KNFTPEQQRRYAEKKARREQTKIYRQKPSTIRQWAREKSDSLVIAATYDPEEILMALLPFLGRSKPFVIYSEFLEPLTRTFATLQKMEA-IIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 430          
BLAST of EWM23698.1 vs. NCBI_GenBank
Match: gi|813171846|ref|XP_012204678.1| (hypothetical protein SPRG_10142 [Saprolegnia parasitica CBS 223.65] >gi|641530488|gb|KDO24610.1| hypothetical protein SPRG_10142 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 225.328 bits (573), Expect = 1.703e-64
Identity = 159/456 (34.87%), Postives = 238/456 (52.19%), Query Frame = 0
Query:   24 VIQEGAWVILQMGDGRNFFACAQQKGMMRLGRVTISLSGLIGVPYGSVLEVHPDRLVPLPGTTELYEDLSVGDMDGNDFARGGAP-LGEYDGVSLDNRDFADTNTAQRLSMEEVEELKRSGASGQAIIQALASNSDTWEKKTAFAKQKWTQKKAHKYVVRVRALAGCGSNVAEALFVKSGLVKTTAIRPDSIAQLLSFGNVAAGARVLVLDSYSGVVLGCILERLGGEGKAISLYAGAQAHIDHLKYFNLPTDQLAQTLVHFPASALAELEVGRA------RRRAEGGEGGEEEDARFLATAEEEARARASGKFVLHTTREGEGQGEEKAAGQEDFDRAKWLKYLEKKRRRLCVLAEGRRLLIEGADCLVVASRHDPSVVVPRLLAFLEDGAAFAVYHEYLEPLVALYASLMEA-GMLRLQMLSTWWREYQILPGRSHPHMSMSSDGGYLLTGIKV 471
            VI++G  V+    D R FF     K  +R+G+ T++L   IG PYG++ E     LVP+                G  F    AP +G++   + DNR + DTN +Q+LS  ++ EL+ SG +G  +I  L  NSDTW+ KT F+KQK+ +KK  KY+ R++ +     ++AE    +    K   +R D++ QLL +GNV AGA+VLV+D+  G+  G I ER+ G G+ ++ + G Q   D L+ FN     +  ++V FP + +  L    A      + +AE     EE +AR    AE         +  L++  E      +K A          +K  + K RR    AE R LL   +D L++AS +DP  ++  LL  L     F VY EYLEPL   + +L     ++ LQ+  TW REYQ+LPGR+HP M+MS+  GY+L+GIKV
Sbjct:    4 VIRDGDTVVCYTSDDRVFFQEVSPKMTLRIGKATVTLKSAIGHPYGTIFEESEKALVPV---------------TGGLFPDPVAPEVGDFQVPTNDNRHYTDTNDSQKLSNVQIAELRASGVNGPELIAKLVENSDTWDTKTEFSKQKYLKKKQQKYMPRIQMVRCTAMSLAEVYHARQPF-KILNLRADTLGQLLQYGNVYAGAQVLVVDTCMGLATGAIAERMLGHGRILAGFEGQQMAADTLRRFNF-EPAVHDSIVPFPLAYVGLLTKDEADLAPPPKSQAEMDSTNEEIEARQREVAE---------RVALYSPEEQAKYLAKKEA---------RIKARQTKTRR--TPAEVRALLRSPSDSLIIASHYDPLSMLQALLPLLGLSKPFVVYSEYLEPLTTAFDALQRMDSIVNLQLNDTWTREYQVLPGRTHPEMTMSAGSGYILSGIKV 422          
The following BLAST results are available for this feature:
BLAST of EWM23698.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104852|gb|EWM23698.1|0.000e+0100.00trna (adenine-n -)-methyltransferase non-catalytic... [more]
gi|553182826|ref|XP_005853789.1|0.000e+0100.00hypothetical protein NGA_2025000, partial [Nannoch... [more]
gi|553182829|ref|XP_005853790.1|7.578e-122100.00trna (adenine-n -)-methyltransferase non-catalytic... [more]
gi|567945538|gb|ETK71349.1|2.690e-6837.77hypothetical protein L915_21397 [Phytophthora para... [more]
gi|675212573|ref|XP_008915171.1|3.119e-6837.99hypothetical protein PPTG_18823 [Phytophthora para... [more]
gi|566008051|gb|ETI30962.1|3.853e-6837.77hypothetical protein F443_21994 [Phytophthora para... [more]
gi|325190588|emb|CCA25085.1|3.971e-6833.77tRNA (adenineN(1))methyltransferase noncatalytic s... [more]
gi|570311745|gb|ETO59693.1|4.374e-6837.77hypothetical protein F444_22014 [Phytophthora para... [more]
gi|1214690636|gb|OWZ05798.1|4.923e-6837.55TRNA (adenine-N(1)-)-methyltransferase non-catalyt... [more]
gi|813171846|ref|XP_012204678.1|1.703e-6434.87hypothetical protein SPRG_10142 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6980rna6980Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications