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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101252g2.9004.mrna |
| Orig protein id | gnl|cribi|Naga_101252g2.9004 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:139326..140623 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6972 ID=rna6972|Name=rna6972|organism=Nannochloropsis gaditana|type=mRNA|length=1001bp
ATGGCGTGGCTTTCACACGATGTCAAGGTGCTTGCCTTGTGCCTTTGTGG
CTTACTATCGCAGTGTCCGTCTGGGCAGCGTCCGGCTCGAGTGCACCACG
ACAGGCATTGCAACTGGCAGTGCTGCCGCCTCGCGCTCCCGTCGCCGCTC
TCCCACTGTGCATACCCCTCCCCCCCCCCCATTCCTCCTACACCCTCGTC
GCCCGTAGTCCTTTTTGCGTCGGGCCAGCTACTGGACAGTGGTGCAGGTG
GTGCTACGCTCGACGGCGGCCCGCACGACTCGGACTGTCACGTCTGTCCG
CCGGGAGGCAGGGCACGGTTTGAGGCAGGCAATACTGTCAAGGCCATTTT
AGCAGAGAACAGTGTCTCACGGTGTCCCATCTGTGAGTTACGAACAGGCT
CGGGCCTCATTGCGTCCACTCTACATGATCCCGCCCAGGCAAGTACGGGG
GAAGTGGACAGCACGCTTGACCTGAACCGCACGCGGAAACGTTGGGTCAA
GAGCAATCCTGCCCACGCCGAGGACTCACAACGAGCAGAAAAGCAAAAGA
GTATCAGTGCCTTGGGCAGCGAGAGACTTATCCACCGAAAGGCTGCGAAA
CAGTGGTCTAGCGCAGGGGAAAATGGCACACCTTGCTGCCTTGTCCGACG
AGGGCGAAGACTGGTCTTTAGGGAAGGAGGCGGGCATGGCCAAGGGAGGG
GAGCTGAAGCAGGGAGGAGATGGAGAGAAAAACCTCCTACCTAACACACC
GCCAGCGTGGAGCGGATGTGGGAGCAGGAGCGGCAGCGGCACTGAAAACG
GGCGGGACGCTTTGGAGCACCTCTATGGGCCGGGACCTGCCCCGCACGGC
TGGGAGGAGGAAGGGAGGGAGGGAGGCGGGGAGGCGGGGGACGAAGGGGT
TCCTGTGAACGGTTTCGACTACAGTAAATCCACGACGGAAGTGTACGGAA
CGTCCGACCGAAACTTTTACGGACCGTACGCGCCGGTGCGGAGCCAGTTG
G back to topprotein sequence of rna6972 >rna6972-protein ID=rna6972-protein|Name=rna6972|organism=Nannochloropsis gaditana|type=polypeptide|length=375bp
MTGLMAKPRSLFIAALFWLSCMVASFLVLGLLLEPCSAFQLPLFSRSQCG
RTCRHNSRRNSVSNYGYIDKDAFLSLQQDIYDLKRPPSLLITVGPQCAGK
TTLLKHLNESRPSFAPPLVDVAIDDQAGLYVPLPMPLFLEGGREGGREGG
RKGSLDKLIKGRTLSSRCDDSATVESRLVLGYLHGMWEIENVEQALRALT
SSSSSSSSSSSSSSSSSSSCPSEEDEWITLLLHALAKARATIATTTKVDT
VATWSPPAASHYQLFLPDLLPQAIRRSYQRLTRSLCGPGPVAWGNTNSKA
RDFKEAILLAGKAGRRVLFIRWGKELGKEVGKEELVLRNVWRAYREGKYV
PVRTIFCGLGKDQGTSERAGGRAGG back to topmRNA from alignment at CM002470.1:139326..140623+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6972 ID=rna6972|Name=rna6972|organism=Nannochloropsis gaditana|type=mRNA|length=1298bp|location=Sequence derived from alignment at CM002470.1:139326..140623+ (Nannochloropsis gaditana)
TACCAAGGCTCAGACAATTTTTTGGATTCCTGTGGAGCCATATTTTTTGT
AtggctccctctctctcttttcttgaaGCACTTCAACCGCAAACCACGAG
CAAAAGCAAGTGGCGTGCATATGCCCTGTCTGCACAGTCGGATAATCTCC
TTCCCGGCTATTCCTACCACCCATGACAGGACTTATGGCCAAGCCACGAA
GTTTATTTATAGCAGCCCTTTTTTGGCTGTCCTGTATGGTTGCATCGTTC
CTCGTCTTGGGACTCCTCTTGGAACCCTGCTCCGCCTTTcagcttcctct
tttctcgcGCTCCCAATGTGGGCGCACATGTAGACATAACTCACGCCGAA
ACAGTGTCAGCAATTATGGGTATATCGATAAGGatgcctttctctccctc
cagcaaGACATTTACGACCTTaagcgtcctccttccctcctcatcaccgt
CGGCCCCCAATGTGCGGGGAAGACCACCCTCCTCAAGCACCTCAACGAAA
GCCGGCCTTCATTCGCGCCTCCCTTGGTGGATGTAGCCATCGATGATCAG
GCAGGTCTTTATGTGCCTCTTCCGATGCCTCTTttcctggagggggggag
ggagggaggaagggagggagggaggaagggaagtcTGGACAAGCTGATTA
AAGGCCGGACACTTTCTTCTCGATGTGATGACTCAGCAACAGTTGAGTCC
AGATTAGTCCTGGGATATTTGCACGGGATGTGGGAGATAGAAAACGTAGA
GCAAGCGCTTCGAgcccttacctcctcctcctcctcctcctcctcctcct
cctcctcctcctcttcctcttcctcctcctgcccctccgaaGAGGACGAA
TGGATCACTTTACTCCTACATGCTCTTGCAAAAGCGCGAGCCACTATCGC
AACGACGACCAAAGTCGATACTGTGGCTACCTGGAGCCCCCCCGCAGCCT
CCCACTaccagctcttcctccccgacctcctcccccaggccaTTCGCCGA
AGCTACCAGCGATTGACTCGCAGCCTTTGTGGACCCGGGCCGGTCGCGTG
GGGCAACACGAACAGCAAGGCTCGCGACTTTAAGGAGGCGATCCTTTTGG
CGGGAAAAGCAGGACGACGGGTCCTGTTCATAAGGTGGGGAAAAGAattg
gggaaggaggtggggaaggaggaattggtCTTGCGCAATGTGTGGAGGGC
GTATCGGGAAGGGAAATACGTGCCAGTTCGCACCATTTTTTGCGGCCTTG
GAAAGGACCAAGGTACTTCtgagcgggcgggcgggcgggcgggcgggc back to topCoding sequence (CDS) from alignment at CM002470.1:139326..140623+ >rna6972 ID=rna6972|Name=rna6972|organism=Nannochloropsis gaditana|type=CDS|length=1126bp|location=Sequence derived from alignment at CM002470.1:139326..140623+ (Nannochloropsis gaditana)
ATGACAGGACTTATGGCCAAGCCACGAAGTTTATTTATAGCAGCCCTTTT
TTGGCTGTCCTGTATGGTTGCATCGTTCCTCGTCTTGGGACTCCTCTTGG
AACCCTGCTCCGCCTTTcagcttcctcttttctcgcGCTCCCAATGTGGG
CGCACATGTAGACATAACTCACGCCGAAACAGTGTCAGCAATTATGGGTA
TATCGATAAGGatgcctttctctccctccagcaaGACATTTACGACCTTa
agcgtcctccttccctcctcatcaccgtCGGCCCCCAATGTGCGGGGAAG
ACCACCCTCCTCAAGCACCTCAACGAAAGCCGGCCTTCATTCGCGCCTCC
CTTGGTGGATGTAGCCATCGATGATCAGGCAGGTCTTTATGTGCCTCTTC
CGATGCCTCTTttcctggagggggggagggagggaggaagggagggaggg
aggaagggaagtcTGGACAAGCTGATTAAAGGCCGGACACTTTCTTCTCG
ATGTGATGACTCAGCAACAGTTGAGTCCAGATTAGTCCTGGGATATTTGC
ACGGGATGTGGGAGATAGAAAACGTAGAGCAAGCGCTTCGAgcccttacc
tcctcctcctcctcctcctcctcctcctcctcctcctcctcttcctcttc
ctcctcctgcccctccgaaGAGGACGAATGGATCACTTTACTCCTACATG
CTCTTGCAAAAGCGCGAGCCACTATCGCAACGACGACCAAAGTCGATACT
GTGGCTACCTGGAGCCCCCCCGCAGCCTCCCACTaccagctcttcctccc
cgacctcctcccccaggccaTTCGCCGAAGCTACCAGCGATTGACTCGCA
GCCTTTGTGGACCCGGGCCGGTCGCGTGGGGCAACACGAACAGCAAGGCT
CGCGACTTTAAGGAGGCGATCCTTTTGGCGGGAAAAGCAGGACGACGGGT
CCTGTTCATAAGGTGGGGAAAAGAattggggaaggaggtggggaaggagg
aattggtCTTGCGCAATGTGTGGAGGGCGTATCGGGAAGGGAAATACGTG
CCAGTTCGCACCATTTTTTGCGGCCTTGGAAAGGACCAAGGTACTTCtga
gcgggcgggcgggcgggcgggcgggc back to top
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