rna6971, rna6971 (mRNA) Nannochloropsis gaditana

Overview
Namerna6971
Unique Namerna6971
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length655
Alignment locationCM002470.1:137599..139075 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101252g1.9005.mrna
Orig protein idgnl|cribi|Naga_101252g1.9005
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:137599..139075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101252g1gene6737Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6971rna6971-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23718.1cds6955Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6971 ID=rna6971|Name=rna6971|organism=Nannochloropsis gaditana|type=mRNA|length=655bp
GAGGGAGGGCGGGCACACGTGAGTCAACACCCGAGCACGCCTCAGCAGTG
GGTGGTGTTCACAGCAGGGCCAATGGGGGCGGGGAAGAGCCACACCCTGC
GTTGGCTGGCGCTCCACGGGCTTTTCCCTTTGAACGATTTCGTGCTGGCA
GATCCGGATGTGATCCGAAACGAGCTCCCCGAAATGAAGGGGTACATCCA
GACCTGCCCGTTACGCGCGGGGCAGCTGACGCACCGGGAGGCGGGCTACA
TGCTGGAGATTGTGGTGGAGGAAGGGTTGAAGGAAGGGAAGAACGTGCTT
GTCCAAGGATCCTTGCGCGACGCGGATTGGCATGCCCGTTACTTTCAGCG
CCCGGCAGAGGGCCCAGACCACCAAAAGGGAAGTTCCTGAGGACGTGTTG
CTGGCCTCTGTGCACGAAACTCCCTGGGCCGTAGCGGCCCTGCGACAGCT
AGTGGATTATTGCGTGAGCATCGACAATGACGTTGGGGGGGAGCCGCGCC
TGGTGGGTCGATGCGAGGGAAGCGGGCAAGAGGGCGGAGAGACGGAGGCA
AGGGAGACATGGAGGGAATTCCGCGGGGTGTGGCGGGGGGATGGTGGGGT
CGGGAGCCAGTTTTCGGAGGGAGGAGGGGAAGGAGGGAGGCACGAGGAGG
GATAG
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protein sequence of rna6971

>rna6971-protein ID=rna6971-protein|Name=rna6971|organism=Nannochloropsis gaditana|type=polypeptide|length=247bp
MAWLSHDVKVLALCLCGLLSQCPSGQRPARVHHDRHCNWQCCRLALPSPL
SHCAYPSPPPIPPTPSSPVVLFASGQLLDSGAGGATLDGGPHDSDCHVCP
PGGRARFEAGNTVKAILAENSVSRCPICELRTGSGLIASTLHDPAQASTG
EVDSTLDLNRTRKRWVKSNPAHAEDSQRAEKQKSISALGSERLIHRKAAK
QWSSAGENGTPCCLVRRGRRLVFREGGGHGQGRGAEAGRRWREKPPT
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mRNA from alignment at CM002470.1:137599..139075-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6971 ID=rna6971|Name=rna6971|organism=Nannochloropsis gaditana|type=mRNA|length=1477bp|location=Sequence derived from alignment at CM002470.1:137599..139075- (Nannochloropsis gaditana)
ATGGCGTGGCTTTCACACGATGTCAAGGTATTTTTCCCCCCTTTTTACTT
GCTTCCCCTCGTCCGCTAAGCCGTTCATAGATCGATCCATATGGCTATTG
ACATGGGGGCCTTAAGTCTGAAAGCCGCACGACGCCACTGGCTTTTCGAA
GACCACGAATGCGATGGGCTACGCGACGTGGATGGCAGGTCGTGGTGGGC
GGTGTATTATTTGCGACGTAATTAACGCCATCGAACTCTTGCCTGGGGTT
CAGTCGGTTGCCTGGTGATGTCACAGGATCGAGATCGGTCGCCGCTCCTT
TATTGCCACTCTTTGTCAAAATCCCCACACTCCGTCTATCATCTGCTGAC
CACACCTCGAAACCTACATAATTTCACATTTCAGGTGCTTGCCTTGTGCC
TTTGTGGCTTACTATCGCAGTGTCCGTCTGGGCAGCGTCCGGCTCGAGTG
CACCACGACAGGCATTGCAACTGGCAGTGCTGCCGCCTCGCGCTCCCGTC
GCCGCTCTCCCACTGTGCATACCCCTCCCCCCCCCCCATTCCTCCTACAC
CCTCGTCGCCCGTAGTCCTTTTTGCGTCGGGCCAGCTACTGGACAGTGGT
GCAGGTGGTGCTACGCTCGACGGCGGCCCGCACGACTCGGACTGTCACGT
CTGTCCGCCGGGAGGCAGGGCACGGTTTGAGGCAGGCAATACTGTCAAGG
CCATTTTAGCAGAGAACAGTGTCTCACGGTGTCCCATCTGTGAGTTACGA
ACAGGCTCGGGCCTCATTGCGTCCACTCTACATGATCCCGCCCAGGCAAG
TACGGGGGAAGTGGACAGCACGCTTGACCTGAACCGCACGCGGAAACGTT
GGGTCAAGAGCAATCCTGCCCACGCCGAGGACTCACAACGAGCAGAAAAG
CAAAAGAGTATCAGTGCCTTGGGCAGCGAGGTGGGTGGGGGGAAGGAACC
GAGGATCCCGCGAAAGGGCTGGGGGTGGGTGGGGCGGGCCGCCGTGTGCG
CGGGTCTATCGCTGACGGTCCTGTTCGGCGTCCGCACCTCGTGGACCAGA
GACTTATCCACCGAAAGGCTGCGAAACAGTGGTCTAGCGCAGGGGAAAAT
GGCACACCTTGCTGCCTTGTCCGACGAGGGCGAAGACTGGTCTTTAGGGA
AGGAGGCGGGCATGGCCAAGGGAGGGGAGCTGAAGCAGGGAGGAGATGGA
GAGAAAAACCTCCTACCTAACACACCGCCAGCGTGGAGCGGATGTGGGAG
CAGGAGCGGCAGCGGCACTGAAAACGGGCGGGACGCTTTGGAGCACCTCT
ATGGGCCGGGACCTGCCCCGCACGGCTGGGAGGAGGAAGGGAGGGAGGGA
GGCGGGGAGGCGGGGGACGAAGGGGTTCCTGTGAACGGTTTCGACTACAG
TAAATCCACGACGGAAGTGTACGGAACGTCCGACCGAAACTTTTACGGAC
CGTACGCGCCGGTGCGGAGCCAGTTGG
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Coding sequence (CDS) from alignment at CM002470.1:137599..139075-

>rna6971 ID=rna6971|Name=rna6971|organism=Nannochloropsis gaditana|type=CDS|length=2232bp|location=Sequence derived from alignment at CM002470.1:137599..139075- (Nannochloropsis gaditana)
AGACTTATCCACCGAAAGGCTGCGAAACAGTGGTCTAGCGCAGGGGAAAA
TGGCACACCTTGCTGCCTTGTCCGACGAGGGCGAAGACTGGTCTTTAGGG
AAGGAGGCGGGCATGGCCAAGGGAGGGGAGCTGAAGCAGGGAGGAGATGG
AGAGAAAAACCTCCTACCTAAGTGCTTGCCTTGTGCCTTTGTGGCTTACT
ATCGCAGTGTCCGTCTGGGCAGCGTCCGGCTCGAGTGCACCACGACAGGC
ATTGCAACTGGCAGTGCTGCCGCCTCGCGCTCCCGTCGCCGCTCTCCCAC
TGTGCATACCCCTCCCCCCCCCCCATTCCTCCTACACCCTCGTCGCCCGT
AGTCCTTTTTGCGTCGGGCCAGCTACTGGACAGTGGTGCAGGTGGTGCTA
CGCTCGACGGCGGCCCGCACGACTCGGACTGTCACGTCTGTCCGCCGGGA
GGCAGGGCACGGTTTGAGGCAGGCAATACTGTCAAGGCCATTTTAGCAGA
GAACAGTGTCTCACGGTGTCCCATCTGTGAGTTACGAACAGGCTCGGGCC
TCATTGCGTCCACTCTACATGATCCCGCCCAGGCAAGTACGGGGGAAGTG
GACAGCACGCTTGACCTGAACCGCACGCGGAAACGTTGGGTCAAGAGCAA
TCCTGCCCACGCCGAGGACTCACAACGAGCAGAAAAGCAAAAGAGTATCA
GTGCCTTGGGCAGCGAGATGGCGTGGCTTTCACACGATGTCAAGAGACTT
ATCCACCGAAAGGCTGCGAAACAGTGGTCTAGCGCAGGGGAAAATGGCAC
ACCTTGCTGCCTTGTCCGACGAGGGCGAAGACTGGTCTTTAGGGAAGGAG
GCGGGCATGGCCAAGGGAGGGGAGCTGAAGCAGGGAGGAGATGGAGAGAA
AAACCTCCTACCTAAGTGCTTGCCTTGTGCCTTTGTGGCTTACTATCGCA
GTGTCCGTCTGGGCAGCGTCCGGCTCGAGTGCACCACGACAGGCATTGCA
ACTGGCAGTGCTGCCGCCTCGCGCTCCCGTCGCCGCTCTCCCACTGTGCA
TACCCCTCCCCCCCCCCCATTCCTCCTACACCCTCGTCGCCCGTAGTCCT
TTTTGCGTCGGGCCAGCTACTGGACAGTGGTGCAGGTGGTGCTACGCTCG
ACGGCGGCCCGCACGACTCGGACTGTCACGTCTGTCCGCCGGGAGGCAGG
GCACGGTTTGAGGCAGGCAATACTGTCAAGGCCATTTTAGCAGAGAACAG
TGTCTCACGGTGTCCCATCTGTGAGTTACGAACAGGCTCGGGCCTCATTG
CGTCCACTCTACATGATCCCGCCCAGGCAAGTACGGGGGAAGTGGACAGC
ACGCTTGACCTGAACCGCACGCGGAAACGTTGGGTCAAGAGCAATCCTGC
CCACGCCGAGGACTCACAACGAGCAGAAAAGCAAAAGAGTATCAGTGCCT
TGGGCAGCGAGATGGCGTGGCTTTCACACGATGTCAAGAGACTTATCCAC
CGAAAGGCTGCGAAACAGTGGTCTAGCGCAGGGGAAAATGGCACACCTTG
CTGCCTTGTCCGACGAGGGCGAAGACTGGTCTTTAGGGAAGGAGGCGGGC
ATGGCCAAGGGAGGGGAGCTGAAGCAGGGAGGAGATGGAGAGAAAAACCT
CCTACCTAAGTGCTTGCCTTGTGCCTTTGTGGCTTACTATCGCAGTGTCC
GTCTGGGCAGCGTCCGGCTCGAGTGCACCACGACAGGCATTGCAACTGGC
AGTGCTGCCGCCTCGCGCTCCCGTCGCCGCTCTCCCACTGTGCATACCCC
TCCCCCCCCCCCATTCCTCCTACACCCTCGTCGCCCGTAGTCCTTTTTGC
GTCGGGCCAGCTACTGGACAGTGGTGCAGGTGGTGCTACGCTCGACGGCG
GCCCGCACGACTCGGACTGTCACGTCTGTCCGCCGGGAGGCAGGGCACGG
TTTGAGGCAGGCAATACTGTCAAGGCCATTTTAGCAGAGAACAGTGTCTC
ACGGTGTCCCATCTGTGAGTTACGAACAGGCTCGGGCCTCATTGCGTCCA
CTCTACATGATCCCGCCCAGGCAAGTACGGGGGAAGTGGACAGCACGCTT
GACCTGAACCGCACGCGGAAACGTTGGGTCAAGAGCAATCCTGCCCACGC
CGAGGACTCACAACGAGCAGAAAAGCAAAAGAGTATCAGTGCCTTGGGCA
GCGAGATGGCGTGGCTTTCACACGATGTCAAG
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Synonyms
Publications