EWM23718.1, cds6955 (CDS) Nannochloropsis gaditana

Overview
NameEWM23718.1
Unique Namecds6955
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:139049..139075 -
Alignment locationCM002470.1:138146..138691 -
Alignment locationCM002470.1:137856..138026 -

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Properties
Property NameValue
Protein idEWM23718.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101252g1.9005.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:139049..139075 -
CM002470.1supercontigCM002470.1:138146..138691 -
CM002470.1supercontigCM002470.1:137856..138026 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23718.1 vs. NCBI_GenBank
Match: gi|585104876|gb|EWM23718.1| (hypothetical protein Naga_101252g1 [Nannochloropsis gaditana])

HSP 1 Score: 498.434 bits (1282), Expect = 2.292e-178
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 
Query:    1 MAWLSHDVKVLALCLCGLLSQCPSGQRPARVHHDRHCNWQCCRLALPSPLSHCAYPSPPPIPPTPSSPVVLFASGQLLDSGAGGATLDGGPHDSDCHVCPPGGRARFEAGNTVKAILAENSVSRCPICELRTGSGLIASTLHDPAQASTGEVDSTLDLNRTRKRWVKSNPAHAEDSQRAEKQKSISALGSERLIHRKAAKQWSSAGENGTPCCLVRRGRRLVFREGGGHGQGRGAEAGRRWREKPPT 247
            MAWLSHDVKVLALCLCGLLSQCPSGQRPARVHHDRHCNWQCCRLALPSPLSHCAYPSPPPIPPTPSSPVVLFASGQLLDSGAGGATLDGGPHDSDCHVCPPGGRARFEAGNTVKAILAENSVSRCPICELRTGSGLIASTLHDPAQASTGEVDSTLDLNRTRKRWVKSNPAHAEDSQRAEKQKSISALGSERLIHRKAAKQWSSAGENGTPCCLVRRGRRLVFREGGGHGQGRGAEAGRRWREKPPT
Sbjct:    1 MAWLSHDVKVLALCLCGLLSQCPSGQRPARVHHDRHCNWQCCRLALPSPLSHCAYPSPPPIPPTPSSPVVLFASGQLLDSGAGGATLDGGPHDSDCHVCPPGGRARFEAGNTVKAILAENSVSRCPICELRTGSGLIASTLHDPAQASTGEVDSTLDLNRTRKRWVKSNPAHAEDSQRAEKQKSISALGSERLIHRKAAKQWSSAGENGTPCCLVRRGRRLVFREGGGHGQGRGAEAGRRWREKPPT 247
The following BLAST results are available for this feature:
BLAST of EWM23718.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104876|gb|EWM23718.1|2.292e-178100.00hypothetical protein Naga_101252g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6971rna6971Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications