rna6966, rna6966 (mRNA) Nannochloropsis gaditana

Overview
Namerna6966
Unique Namerna6966
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length754
Alignment locationCM002470.1:127810..128560 -

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Properties
Property NameValue
ProductTranscription elognation factor Eaf
Orig transcript idgnl|cribi|Naga_100923g2.9452.mrna
Orig protein idgnl|cribi|Naga_100923g2.9452
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:127810..128560 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100923g2gene6732Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6966rna6966-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23724.1cds6950Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6966 ID=rna6966|Name=rna6966|organism=Nannochloropsis gaditana|type=mRNA|length=754bp
TGCCACACAGGGCGACTACAACCTTGTGCACGCCGCCTTTCCCACCAAAT
AAGCCGCCTTGGACTTTTGCACAGCTTAGTACGCCGTCGGGCACCTCCCC
TTCCTCTCTTCAACAGGCACGATGCCCACTCCTTCCTTTCAAAGCATTTC
CTCCCCTCCTCCTCCACCCCCGTCCTCCCCGCCACGTCTCCGCAACATCT
TCGATCCCCTTCCTTTGCATGGCCAGGACATCGCCGCCGCGCGCATGGAA
TCGGTGGCAGCCAGCCATGAAGCACGTCGCCTGTGGGTTGGTACAAGCGA
TGGCTTTTTACAGGCCTTTACTCTGGATCCTGCCACGGGTAGCACCACCC
TGACCTCCTCCTCCCCCGCTTCTTCCCCCACCCGCGCCAATGCCAAGGCC
TCCCCCCTCTCCCACCTGACTCCAGTGTCGGCCTGGGGCCTTCTCCTAGG
TCTCTGGGAAGGGAATCTGACGGGCTTCGACCTGGACTCGGGGACGTGGT
CGTTCTCGGTGGAGGAATGCCTCCGGCAGGGCGTGGGCTTGGCGGTGGTG
GAGCATGCCGGGCGGGTCTGTGTGTGGCTGGCCTCTGGGAGTCGAGGTGT
TGCCGCCAAAGGGGAAGGAAGAGGCAGCCGCCTCTTGCTCCTGGCCTGGG
AGGGCGGCGACGCGGGGAGGGGGAGGTTGCAGCGGCACTGGGAAGTGGAT
TTGGGGGCGTGGGAGGAGGTACCCCGGTTCCTGCGGGTATGCCCGGGGGG
GGGT
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protein sequence of rna6966

>rna6966-protein ID=rna6966-protein|Name=rna6966|organism=Nannochloropsis gaditana|type=polypeptide|length=185bp
MPSNGTSPWPAGGEVPVNLNLDQGKECLLLQYRFKPGTVDYDVGATYDIE
PSGRVTVHHALKAGAQTGPGRHHEDKKEEGRATLSFHGHRQPIHTQGREF
VLIYEPETAKFEMRRLDALVPDVRDERAQGGAEGGSAGRMEDGKKLGPAS
WPPSGAKDEEEMEGGKERGGGNGGRIDGARGSAEA
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mRNA from alignment at CM002470.1:127810..128560-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6966 ID=rna6966|Name=rna6966|organism=Nannochloropsis gaditana|type=mRNA|length=751bp|location=Sequence derived from alignment at CM002470.1:127810..128560- (Nannochloropsis gaditana)
GGCGGGCCATGCCAAGCAATGGTACATCGCCGTGGCCGGCGGGGGGTGAA
GTTCCAGTGAATCTAAACCTTGACCAAGGTACGTGTTGCTCCCTCTTCCC
TTTCATGATCGGTCCCACGCGAAAACTTCCCTGCCCCATTTGACGCTTTG
CCCGCATGGTATTGCACTAGCAGGCAAGGAATGCCTTCTTCTTCAATACC
GGTTTAAACCTGGCACGGTGGATTATGACGTGGGGGCTACCTATGATATC
GAGCCCAGCGGTCGAGTGACAGTGCACCATGCTCTGAAGGCGGGGGCCCA
AACTGGCCCTGGCAGACATCACGAGGACAAAAAAGAAGAAGGCAGGGCGA
CTTTGTCGTTCCACGGGCACCGGCAGCCGATACACACCCAGGGGAGGGAG
TTTGTGTTGATATATGAGCCGGAGACGGCCAAGTTTGAGATGAGGAGGTT
GGATGCTTTAGTGCCCGATGTTCGTGACGAGAGGGCTCAAGGAGGGGCGG
AGGGAGGGAGCGCAGGAAGAATGGAGGATGGGAAAAAGCTGGGGCCGGCG
TCATGGCCCCCATCGGGTGCCAAGGACGAGGAAGAGATGGAGGGAGGGAA
GGAGAGAGGGGGGGGGAATGGAGGGAGGATTGATGGCGCCCGCGGTAGTG
CTGAAGCATAAAAGAGTGCAGGGGATGATAAAGCAGCAGAAAGCAAAAAA
AAGAGAAGGAGAAGGAACGCGAGCGGAAACGGGAGGAAAAAGAGGAGGAG
A
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Coding sequence (CDS) from alignment at CM002470.1:127810..128560-

>rna6966 ID=rna6966|Name=rna6966|organism=Nannochloropsis gaditana|type=CDS|length=1116bp|location=Sequence derived from alignment at CM002470.1:127810..128560- (Nannochloropsis gaditana)
GCAAGGAATGCCTTCTTCTTCAATACCGGTTTAAACCTGGCACGGTGGAT
TATGACGTGGGGGCTACCTATGATATCGAGCCCAGCGGTCGAGTGACAGT
GCACCATGCTCTGAAGGCGGGGGCCCAAACTGGCCCTGGCAGACATCACG
AGGACAAAAAAGAAGAAGGCAGGGCGACTTTGTCGTTCCACGGGCACCGG
CAGCCGATACACACCCAGGGGAGGGAGTTTGTGTTGATATATGAGCCGGA
GACGGCCAAGTTTGAGATGAGGAGGTTGGATGCTTTAGTGCCCGATGTTC
GTGACGAGAGGGCTCAAGGAGGGGCGGAGGGAGGGAGCGCAGGAAGAATG
GAGGATGGGAAAAAGCTGGGGCCGGCGTCATGGCCCCCATCGGGTGCCAA
GGACGAGGAAGAGATGGAGGGAGGGAAGGAGAGAGGGGGGGGGAATGGAG
GGAGGATTGATGGCGCCCGCGGTAGTGCTGAAGCATAAATGCCAAGCAAT
GGTACATCGCCGTGGCCGGCGGGGGGTGAAGTTCCAGTGAATCTAAACCT
TGACCAAGGCAAGGAATGCCTTCTTCTTCAATACCGGTTTAAACCTGGCA
CGGTGGATTATGACGTGGGGGCTACCTATGATATCGAGCCCAGCGGTCGA
GTGACAGTGCACCATGCTCTGAAGGCGGGGGCCCAAACTGGCCCTGGCAG
ACATCACGAGGACAAAAAAGAAGAAGGCAGGGCGACTTTGTCGTTCCACG
GGCACCGGCAGCCGATACACACCCAGGGGAGGGAGTTTGTGTTGATATAT
GAGCCGGAGACGGCCAAGTTTGAGATGAGGAGGTTGGATGCTTTAGTGCC
CGATGTTCGTGACGAGAGGGCTCAAGGAGGGGCGGAGGGAGGGAGCGCAG
GAAGAATGGAGGATGGGAAAAAGCTGGGGCCGGCGTCATGGCCCCCATCG
GGTGCCAAGGACGAGGAAGAGATGGAGGGAGGGAAGGAGAGAGGGGGGGG
GAATGGAGGGAGGATTGATGGCGCCCGCGGTAGTGCTGAAGCATAAATGC
CAAGCAATGGTACATCGCCGTGGCCGGCGGGGGGTGAAGTTCCAGTGAAT
CTAAACCTTGACCAAG
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Synonyms
Publications