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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100577g6.10010.mrna |
| Orig protein id | gnl|cribi|Naga_100577g6.10010 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:119776..120421 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6962 ID=rna6962|Name=rna6962|organism=Nannochloropsis gaditana|type=mRNA|length=2079bp
GAAGCAAATAATAGGATTCAAAAACAACTGTGGTTTTATCACGCAGCCAG
TACATGAGGTCATCGCAGATGGTAATGGAAAGGCAAGAGCATTTCAAACC
TTTATGTCTTTGCTTCGTATCAACCAGCATGGTAAAATACGGCCATGGCA
GAAAAAGTCAAGGGGAAGGGGTCGCTGAACGGTCGCTTAAAGTCTTCGGA
AGGCCTCCCATCCACCGAAACGTTGTGGTCTGCCCTCCCTCCCTCCCTCC
CTCCCTCCCCTTGCCTCTATATACGGGCAAGGCCACGTCTTCCCTCCTAA
AGGCGTAATAGCGGCTGATGCCTCCCTTAGTCTGGCGTTGCAGAGGGCGT
TGAGCGTCACAATGGTGGCTACTTCCCCCAGCACCATCATCCCAATACAG
CGCGCGTGTGAGCTCTCGGGCGAGGAATAGAAAGTAAGACCTCGTATACA
ACGTCATCCACGGCATGAAGGAAAGCGGAAAAAGCCGACATTACCGACCA
ACTTGGTGCTTCTCATGCATGAACATTTCTGTGGTGCGGACCACCGCCGA
CGCCCCCAACAAGGACCCCGCGATCGCCAGACTGGCGGAGACAGAGCCAA
AGTCTCTGAAGGAAATCTCCTCCAGACTACATAACCATAGCCGTGTCGAG
CTCGACATTCTACGTCACGTGGGGCCCCACGTGCTCGGGAGAGTGAGGGT
GCTTTGCCGTGATATATCGGGCGGAGCACACTCCCGCGGCGAAGCGGGCG
TGGAGCCAGTCGAGCACCTGGGGCTCCACGTGGCGTCGCAGGTCCAGGTC
GACGCAGCTGTGGTTGTGGAGTCTTGAAAAGACCACCTTGACAGACTTCG
GCCCTGTCTCCGTCAGTCTGGCGTTCGCAGGGTCCTTGTAGGCGGCGGTG
GTGGTCCGTACTATCGTCATGTCTATGGCGGAGGGGCACGACGTTGGCCG
GTAGTGTTGGCTCTTCTTCTTTCTCCGCCTGCCGTGGACAGCATGATCCT
TTGGTGCCACGTCCCGAGGGCTTATTTTTTGGATCACGCCGGAGAGCTCG
CACGTGAGCTCCCTAGGGGCCTTGGTCACGCTGGTGAAGGTGGCCACCAT
GGTGTCGTCCAACGCCCTCGGCAACGCCGGACGTAACTGCGCATCAGCCG
CTACGTCGCCCTTCTGAGGGAAGACGTGGTGGACGCCGGGGTCAAAGACA
TAGAAATTCATGCGCTACTTCCACTCGACCGGGGGGGGGGAGTCGACCTG
GGTAACGGCCGTCCGCTATGGATCTGCCCTTCTCCATAGCCCGTAATGCG
CTCTTCCCTATCTCCAGTGGGATCTCTCTACACACCATGATTTCATGGGC
CGTGGCGGCACGCACGTCGTGTCGTGTCTGCTTGTCACAACGAGGTCTTC
CTTGCCCTTTCCTTCTGGCGCTTCCGGATGGGAAGGTGTCCACAGCCTCC
GCCCACTCGCTCTTGTCTGCCACTGCATGGTATGACTTGGAAAGTGTGGG
GTCAAACTTTGAATGCATAGCCGGCGGGCTGGCCTAGACGTTCTCCCACA
CTTCTCCCACTGTGCAATTGCTCCCCTTCTCCCTCCCTCCTTTCCTCCAC
TTACCTTCACGGAGCCACGCATCACCATAACTTTTAAAATTATTCTTAAG
AGCCGCGCCCGGGCCGGGCACGTATTTGCAAATGTGTGTGGGAGGCACAG
GCACCTGTGTTTCCTCTGTTCCCGCTTTGGTTACGATGCGCAACGGGGCA
TCCGTGGCGGTTGTGCCGCTGTAAATGTCACCGAGAGAAGATGTCGTTGC
AGTTGTAGCGTGGAAGGGGAAATGAAGTGTCACAAATCAATGGCAGCATA
GGCCACCATAATGAGCAAACAATTTTCGAAGGCACACAGCCGTCGCTTAA
AGTGGCTTTGATTACGTGCGCGGGTTGGCTTTGCGCCTTTATGCGCCTTA
AAGATACATGTACGATGCGAAAGTGAGAAATAAATGCCAGCGTCGAGGCA
AATAACAACTTTAAAACAAAGAAGATAACAACTTCGGCTGTTCGAACCTT
TCGATAGTCAGCACTAGGCGACCCGGATG back to topprotein sequence of rna6962 >rna6962-protein ID=rna6962-protein|Name=rna6962|organism=Nannochloropsis gaditana|type=polypeptide|length=199bp
MEGFTVHKNVHDISRSPKKENISPKMDLRDSSPGISTESGPKGGKRTKQR
RAKYTKDSWREDREQGHKNTTNPRATSLKSQQNGVMARSEKLSRLSIGPR
PGNAVHPTDATLSHPHDGKKHVGKPTPTQKRHGRVAQKENRGSNHSSRPQ
VHPGSASTLINLCTRTLECYQKKASPRTCTARQAVSFFPPRRSLLPLWT back to topmRNA from alignment at CM002470.1:119776..120421+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6962 ID=rna6962|Name=rna6962|organism=Nannochloropsis gaditana|type=mRNA|length=646bp|location=Sequence derived from alignment at CM002470.1:119776..120421+ (Nannochloropsis gaditana)
ATGGAAGGCTTTACAGTCCACAAGAACGTCCATGACATCAGTCGAAGTCC
TAAAAAGGAGAATATTAGCCCGAAAATGGATCTGAGGGACAGCAGCCCTG
GGATAAGCACCGAATCTGGACCAAAAGGGGGCAAGAGAACTAAGCAAAGA
CGAGCAAAGTACACAAAAGATTCGTGGAGAGAAGACCGTGAACAAGGGCA
CAAAAATACCACCAACCCGCGTGCAACGTCTTTAAAATCGCAGCAAAACG
GAGTGATGGCGCGCTCCGAGAAGCTTTCTAGGTTGTCGATAGGCCCGCGT
CCTGGAAATGCTGTTCATCCGACGGACGCCACGCTCAGCCATCCCCACGA
TGGAAAGAAGCATGTTGGCAAGCCAACACCGACACAAAAGAGGCACGGCC
GAGTCGCCCAGAAAGAAAATCGGGGTAGCAACCACAGCAGCCGTCCACAA
GGTGCGACGGACCTTGGGTGCGACCGATGTATTCCCACCCCATCCAGTCC
ATCCGGGCAGCGCCTCCACCCTCATCAACCTCTGCACCCGCACACTGGAA
TGCTACCAGAAGAAAGCGTCTCCCCGCACATGCACAGCAAGACAAGCGGT
GTCAttcttcccgccccggcgttcccttctccctctgtgGACTTGA back to topCoding sequence (CDS) from alignment at CM002470.1:119776..120421+ >rna6962 ID=rna6962|Name=rna6962|organism=Nannochloropsis gaditana|type=CDS|length=1200bp|location=Sequence derived from alignment at CM002470.1:119776..120421+ (Nannochloropsis gaditana)
ATGGAAGGCTTTACAGTCCACAAGAACGTCCATGACATCAGTCGAAGTCC
TAAAAAGGAGAATATTAGCCCGAAAATGGATCTGAGGGACAGCAGCCCTG
GGATAAGCACCGAATCTGGACCAAAAGGGGGCAAGAGAACTAAGCAAAGA
CGAGCAAAGTACACAAAAGATTCGTGGAGAGAAGACCGTGAACAAGGGCA
CAAAAATACCACCAACCCGCGTGCAACGTCTTTAAAATCGCAGCAAAACG
GAGTGATGGCGCGCTCCGAGAAGCTTTCTAGGTTGTCGATAGGCCCGCGT
CCTGGAAATGCTGTTCATCCGACGGACGCCACGCTCAGCCATCCCCACGA
TGGAAAGAAGCATGTTGGCAAGCCAACACCGACACAAAAGAGGCACGGCC
GAGTCGCCCAGAAAGAAAATCGGGGTAGCAACCACAGCAGCCGTCCACAA
GTCCATCCGGGCAGCGCCTCCACCCTCATCAACCTCTGCACCCGCACACT
GGAATGCTACCAGAAGAAAGCGTCTCCCCGCACATGCACAGCAAGACAAG
CGGTGTCAttcttcccgccccggcgttcccttctccctctgtgGACTTGA
ATGGAAGGCTTTACAGTCCACAAGAACGTCCATGACATCAGTCGAAGTCC
TAAAAAGGAGAATATTAGCCCGAAAATGGATCTGAGGGACAGCAGCCCTG
GGATAAGCACCGAATCTGGACCAAAAGGGGGCAAGAGAACTAAGCAAAGA
CGAGCAAAGTACACAAAAGATTCGTGGAGAGAAGACCGTGAACAAGGGCA
CAAAAATACCACCAACCCGCGTGCAACGTCTTTAAAATCGCAGCAAAACG
GAGTGATGGCGCGCTCCGAGAAGCTTTCTAGGTTGTCGATAGGCCCGCGT
CCTGGAAATGCTGTTCATCCGACGGACGCCACGCTCAGCCATCCCCACGA
TGGAAAGAAGCATGTTGGCAAGCCAACACCGACACAAAAGAGGCACGGCC
GAGTCGCCCAGAAAGAAAATCGGGGTAGCAACCACAGCAGCCGTCCACAA
GTCCATCCGGGCAGCGCCTCCACCCTCATCAACCTCTGCACCCGCACACT
GGAATGCTACCAGAAGAAAGCGTCTCCCCGCACATGCACAGCAAGACAAG
CGGTGTCAttcttcccgccccggcgttcccttctccctctgtgGACTTGA back to top
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