EWM23727.1, cds6946 (CDS) Nannochloropsis gaditana

Overview
NameEWM23727.1
Unique Namecds6946
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:119776..120226 +
Alignment locationCM002470.1:120273..120421 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23727.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100577g6.10010.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:119776..120226 +
CM002470.1supercontigCM002470.1:120273..120421 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23727.1 vs. NCBI_GenBank
Match: gi|585104892|gb|EWM23727.1| (hypothetical protein Naga_100577g6 [Nannochloropsis gaditana])

HSP 1 Score: 409.838 bits (1052), Expect = 8.903e-145
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 
Query:    1 MEGFTVHKNVHDISRSPKKENISPKMDLRDSSPGISTESGPKGGKRTKQRRAKYTKDSWREDREQGHKNTTNPRATSLKSQQNGVMARSEKLSRLSIGPRPGNAVHPTDATLSHPHDGKKHVGKPTPTQKRHGRVAQKENRGSNHSSRPQVHPGSASTLINLCTRTLECYQKKASPRTCTARQAVSFFPPRRSLLPLWT 199
            MEGFTVHKNVHDISRSPKKENISPKMDLRDSSPGISTESGPKGGKRTKQRRAKYTKDSWREDREQGHKNTTNPRATSLKSQQNGVMARSEKLSRLSIGPRPGNAVHPTDATLSHPHDGKKHVGKPTPTQKRHGRVAQKENRGSNHSSRPQVHPGSASTLINLCTRTLECYQKKASPRTCTARQAVSFFPPRRSLLPLWT
Sbjct:    1 MEGFTVHKNVHDISRSPKKENISPKMDLRDSSPGISTESGPKGGKRTKQRRAKYTKDSWREDREQGHKNTTNPRATSLKSQQNGVMARSEKLSRLSIGPRPGNAVHPTDATLSHPHDGKKHVGKPTPTQKRHGRVAQKENRGSNHSSRPQVHPGSASTLINLCTRTLECYQKKASPRTCTARQAVSFFPPRRSLLPLWT 199
The following BLAST results are available for this feature:
BLAST of EWM23727.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104892|gb|EWM23727.1|8.903e-145100.00hypothetical protein Naga_100577g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6962rna6962Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications