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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101340g1.4534.mrna |
| Orig protein id | gnl|cribi|Naga_101340g1.4534 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:72153..73561 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6943 ID=rna6943|Name=rna6943|organism=Nannochloropsis gaditana|type=mRNA|length=554bp
CCGTTGATCGAGCATTAAAAGCCTTCACATCCACTTTATCTGGTGATTTG
CATTCTAATTTATGCCCAAATGTCCATGCATTTCTTCGCACATCTGAACT
CCTGCTATCAGGGTCGCAGATACTTGAAGGCCCGTCTACGCCGTCGGCCC
AAGAGATGAGCGCACCTACATGCACGGGGGAAACGCCCTCTGCTTCATCT
CACCAAAGTGTAGAAAAGGAAGAGAAAGCAGACAAAGACAAAACAACGGA
GGGATCCAATGAAGAGGACGAAGAATACCGTGTCTTGGCTGAGCGGTACA
AAGATGAAGGGAACGCAGCATTCAAGGAGGGGAGGTACAAGGAGGCTCTA
GCGCTCTATACCCAAGGTGTGGCTATAGACCCCGACAACCACGTTTTGTA
CAGCAATCGAAGCGCCGCCTTTCTGAAAGAATCTGAACGGGGCAAGGCTT
TAAAAGACGCGGAGAGGCTGATGGAAATCAAACCGGACTGGCCAAAGTCC
TACTCTCGAAAAGGCGCCGCTCAACACGCCCTCACTCGCTACGCGATAAC
GTAG back to topprotein sequence of rna6943 >rna6943-protein ID=rna6943-protein|Name=rna6943|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
PSFLPFFLTPCPLSLGLFHTPSTSLPPSLPPSLRHDLEGARRGASCYSEG
NYEGICGGGNAEEERGETYSSIQAIRATDGRRGEIETTTGDGLRRQVDGG
GSAGRSGRQLAGIPERTGGQKGPCAGIPPSLPPSLHSFFPVSFPFFFPWW
PLAPACQRDGHVHVACCVFASFYTLLARKVLSSMLTFFPGGS back to topmRNA from alignment at CM002470.1:72153..73561+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6943 ID=rna6943|Name=rna6943|organism=Nannochloropsis gaditana|type=mRNA|length=1409bp|location=Sequence derived from alignment at CM002470.1:72153..73561+ (Nannochloropsis gaditana)
ccttcctttctcccgttcTTCCTTaccccttgtcctctttctctcggACT
TTTCCACActccctctacctccctccctccctccctccctccctccctca
ggcatGACCTTGAGGGAGCTAGGCGTGGAGCAAGCTGCTATTCAGAAGGC
AATTATGAAGGAATTTGCGGAGGTGGAAAtgcggaagaagaacgcgGAGA
AACATACTCAAGCATTCAAGTgtgttccccctccctccctccttccctcc
ctccttccctcccttcctctcttccttcccccctttcctccttctcctct
ttgacgttctctctcctccctctttgactccttctctttccttccttcgt
tttcctccttcctccccctgccttcttacAGGCAATACGAGCAACagatg
gaagacgaggagagaTTGAAACAACAACGGTGCGtacttttcttcttttt
ttttctttttttttcctatcTTACGTTGTCTCtcgatttccttccttctt
tgtaCTACCTTCTCCTCATGTGTGTTTAGccctaccttccctccccctcc
tccctcgtctggcacaccaccctcccttccgtccccgcctgcctccttcc
ctttccttttctgttttttctattttttttcttttcaaacCCCGGGACCT
TGCCTTTGTCGACATatctccacctctccttcttcttttcctttttcttt
ctttccttccctcgtgCCCCCCTCTGTGTACCGATGCAGGGAGATGGACT
TCGACGCCAAgtggacggaggaggatcgGCGGGAAGGTCGGGTCGGCAAC
TGGCGGGAATTCCAGAAAGGACCGGGGGCCAAAAGGGCCCGTGTGCAggt
atccctccctccctccctccctccctccattccttctttcctgtctcttt
ccctttctttttcccttggTGGCCTCTTGCACCTGCTTGCCAACGAGATG
GGCATGTGCATGTTGCGTGTTGTGTCTTCGCATCGTTTTACACCCTACTA
GCAAGGAAAGTTTTGTCCTCAATGCTCACATTCTTTCCGGGTGGATCTTG
ATGTCTCCTTAAGGCCTggtcggtggaggaaaatgtgaaggagaagccgA
AGTACGGACAATccagcaaggaggaatggaaaaaaTCGTGGAAATGAAGC
AGGGGTGGCGCGGAACACGTacaagggggaagagataTCGTGATGGACGA
GAGGAACCCTTTTGGGACTCGGGAAAGGTGAAAGTAAAAAAATGGCTGTG
AAGAAATGAGGGACTTTCGTCGTTATGGACTTGTGGTCAAAGACATGGGT
GATTAATTTAGCTGGAAAGTACGGCTTCAACATCAGCTCACTTCTATATT
TGCCCGTAGTTCCTCTCAAAATTGACTTGATTTCAGCTTGTTAAGGGACT
TTTTAATCC back to topCoding sequence (CDS) from alignment at CM002470.1:72153..73561+ >rna6943 ID=rna6943|Name=rna6943|organism=Nannochloropsis gaditana|type=CDS|length=1737bp|location=Sequence derived from alignment at CM002470.1:72153..73561+ (Nannochloropsis gaditana)
ccttcctttctcccgttcTTCCTTaccccttgtcctctttctctcggACT
TTTCCACActccctctacctccctccctccctccctccctccctccctca
ggcatGACCTTGAGGGAGCTAGGCGTGGAGCAAGCTGCTATTCAGAAGGC
AATTATGAAGGAATTTGCGGAGGTGGAAAtgcggaagaagaacgcgGAGA
AACATACTCAAGCATTCAAGCAATACGAGCAACagatggaagacgaggag
agaTTGAAACAACAACGGGAGATGGACTTCGACGCCAAgtggacggagga
ggatcgGCGGGAAGGTCGGGTCGGCAACTGGCGGGAATTCCAGAAAGGAC
CGGGGGCCAAAAGGGCCCGTGTGCAggtatccctccctccctccctccct
ccctccattccttctttcctgtctctttccctttctttttcccttggTGG
CCTCTTGCACCTGCTTGCCAACGAGATGGGCATGTGCATGTTGCGTGTTG
TGTCTTCGCATCGTTTTACACCCTACTAGCAAGGAAAGTTTTGTCCTCAA
TGCTCACATTCTTTCCGGGTGGATCTTGAccttcctttctcccgttcTTC
CTTaccccttgtcctctttctctcggACTTTTCCACActccctctacctc
cctccctccctccctccctccctccctcaggcatGACCTTGAGGGAGCTA
GGCGTGGAGCAAGCTGCTATTCAGAAGGCAATTATGAAGGAATTTGCGGA
GGTGGAAAtgcggaagaagaacgcgGAGAAACATACTCAAGCATTCAAGC
AATACGAGCAACagatggaagacgaggagagaTTGAAACAACAACGGGAG
ATGGACTTCGACGCCAAgtggacggaggaggatcgGCGGGAAGGTCGGGT
CGGCAACTGGCGGGAATTCCAGAAAGGACCGGGGGCCAAAAGGGCCCGTG
TGCAggtatccctccctccctccctccctccctccattccttctttcctg
tctctttccctttctttttcccttggTGGCCTCTTGCACCTGCTTGCCAA
CGAGATGGGCATGTGCATGTTGCGTGTTGTGTCTTCGCATCGTTTTACAC
CCTACTAGCAAGGAAAGTTTTGTCCTCAATGCTCACATTCTTTCCGGGTG
GATCTTGAccttcctttctcccgttcTTCCTTaccccttgtcctctttct
ctcggACTTTTCCACActccctctacctccctccctccctccctccctcc
ctccctcaggcatGACCTTGAGGGAGCTAGGCGTGGAGCAAGCTGCTATT
CAGAAGGCAATTATGAAGGAATTTGCGGAGGTGGAAAtgcggaagaagaa
cgcgGAGAAACATACTCAAGCATTCAAGCAATACGAGCAACagatggaag
acgaggagagaTTGAAACAACAACGGGAGATGGACTTCGACGCCAAgtgg
acggaggaggatcgGCGGGAAGGTCGGGTCGGCAACTGGCGGGAATTCCA
GAAAGGACCGGGGGCCAAAAGGGCCCGTGTGCAggtatccctccctccct
ccctccctccctccattccttctttcctgtctctttccctttctttttcc
cttggTGGCCTCTTGCACCTGCTTGCCAACGAGATGGGCATGTGCATGTT
GCGTGTTGTGTCTTCGCATCGTTTTACACCCTACTAGCAAGGAAAGTTTT
GTCCTCAATGCTCACATTCTTTCCGGGTGGATCTTGA back to top
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