EWM23746.1, cds6927 (CDS) Nannochloropsis gaditana

Overview
NameEWM23746.1
Unique Namecds6927
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:72153..72371 +
Alignment locationCM002470.1:72534..72581 +
Alignment locationCM002470.1:72892..73203 +

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Properties
Property NameValue
Start range72153
Start range.
Protein idEWM23746.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101340g1.4534.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:72153..72371 +
CM002470.1supercontigCM002470.1:72534..72581 +
CM002470.1supercontigCM002470.1:72892..73203 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23746.1 vs. NCBI_GenBank
Match: gi|585104936|gb|EWM23746.1| (hypothetical protein Naga_101340g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 384.415 bits (986), Expect = 6.251e-135
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 
Query:    1 PSFLPFFLTPCPLSLGLFHTPSTSLPPSLPPSLRHDLEGARRGASCYSEGNYEGICGGGNAEEERGETYSSIQAIRATDGRRGEIETTTGDGLRRQVDGGGSAGRSGRQLAGIPERTGGQKGPCAGIPPSLPPSLHSFFPVSFPFFFPWWPLAPACQRDGHVHVACCVFASFYTLLARKVLSSMLTFFPGGS 192
            PSFLPFFLTPCPLSLGLFHTPSTSLPPSLPPSLRHDLEGARRGASCYSEGNYEGICGGGNAEEERGETYSSIQAIRATDGRRGEIETTTGDGLRRQVDGGGSAGRSGRQLAGIPERTGGQKGPCAGIPPSLPPSLHSFFPVSFPFFFPWWPLAPACQRDGHVHVACCVFASFYTLLARKVLSSMLTFFPGGS
Sbjct:    1 PSFLPFFLTPCPLSLGLFHTPSTSLPPSLPPSLRHDLEGARRGASCYSEGNYEGICGGGNAEEERGETYSSIQAIRATDGRRGEIETTTGDGLRRQVDGGGSAGRSGRQLAGIPERTGGQKGPCAGIPPSLPPSLHSFFPVSFPFFFPWWPLAPACQRDGHVHVACCVFASFYTLLARKVLSSMLTFFPGGS 192
The following BLAST results are available for this feature:
BLAST of EWM23746.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104936|gb|EWM23746.1|6.251e-135100.00hypothetical protein Naga_101340g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6943rna6943Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications