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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102336g1.2576.mrna |
| Orig protein id | gnl|cribi|Naga_102336g1.2576 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:55846..56655 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6935 ID=rna6935|Name=rna6935|organism=Nannochloropsis gaditana|type=mRNA|length=2169bp
CCAAATATTATATGTCAGGTTGCATGGACCATTTCGAAAGCGTCTTTCCT
CTCTCAAAGGCTTTTTTTTATGGGAGGTCATAGTAGCCTAACGCAGCGCG
AGTTGAAGTTTCCGTCTGCCTGTTCGTCGTGATCCAAGGGCAGATGTAAA
AGGACTGATGTGAGATTAGTCTGGCCATTTAAACATGCATCTATCGAGTT
TGGGGAAGGCTCTCCATGCATTTGGACCTTTTTGAACGGTTGCTCTAACA
TTCTGGAGTTCGGTATTAGTATAAGTTTAAGGCAAGACTTTGGTATGCCC
CTTACCAGGACATATCTTAGGAATATAAAAATATATAAATATGTCTGCAT
GTCATGGACCATTTTACTCATGTCAGGTAGCTTTAAATGGAGCCATTGTA
CAACGAAGCCCAGCCAAATATTGAGGGAGACGAATGTAGCGAAAAAAGGG
CTGAATATAGGTTTGAGACCCTCCAGGTACATGCAGGACAATCCCCTGAC
CCGCATTCCCTCTCTCGTGCTGTCCCTATCTATGCCTCCTCGTCCTTCGT
CTTCCGAGACCACGAACATGGTGCCCGTCTCTTTGCTTTGGAAGAATCTG
GGAACCTGTACAGTCGGATCATGAACCCGACAAACGACGTGTTTGAAAAG
CGGGTGGCGGCTTTGGAGGGCGGGAAAATGGCCGTAGCTACGGCCTCGGG
GCAGGCGGCCCAGTTCCTAGCAATCGTGACCCTCGCACAGGCAGGAGACA
ATTTCGTGTCCTCGTGCTCTCTGTACGGCGGCACCTACTGCCAGTTCAAA
GTCTCCTTGCCCAGGCTTGGTATCAGCGCTCGCTTCGCTCCGGATGACGA
TCCCGCCTCGTTCGAGATGCTGGTGGACAATAAGACCAAAGCGCTGTATG
TGGAGACGCTAGGCAATCCTAAGTATAACATTCCACGATTCAAAGAACTG
AAAATGCTGGCAGAAAAGCACCGGATACCTTTGATTGTGGACAATACCTT
CGGCGGTTGCGGGGCCATTTGTCGCCCGATTGAGCACGGCGCGGATATTG
TGGTGGAGAGCGCGACGAAGTGGATCGGGGGCCATGGCACGACCATTGGC
GGCGTGATTGTGGATGCCGGTACCTTTGATTGGAGCAACGGAAAGTTCCC
TCTGTTCACGGACCCTTCTCCCGGGTACCATGGCTTGAAATTTTGGGATG
TCTTTGGTGGAGAGAAGAGCGTCCTCGGTTTCAACGGGGCGTTTGCCGTT
CGCGCCCGTGTGGAGGGACTGCGGGATTTTGGTGCGTGCCAGAATCCCTT
CGGCGCTTTTCTGCTATTGCAGGGTCTAGAAACACTCTCCTTGCGCATCG
AGCGCATCAACCACAATGCCCTCCATTTGGCGCGCTGGCTGAAAACTTGC
TCTAGTGTGGCGTGGGTGCGGTACCCTGGTTTGCCGGAGCACGAGTCCTA
TGAACGGGCCCGACAATATTTCAGACCAGGCTTGTTCGGTCCTGTCCTGA
GCTTTGGCGTGAAGGGGGGCCGGAAAGCGGGAACAATCTTCATCAACAGC
TGCGTCCTCGCCTCGCACCTAGCCAATGTGGGGGATGCCAAGACTCTGAT
CATCCACCCGGCCTCCACGACACACCAACAACTCACCGAAAGAGAGCAGG
AGGGGAGTGGAGTCACGGCTGATATGATTCGGGTCTCCGTTGGCATTGAG
CACCTGGAGGATATCAAAGCAGATTTCGCCCAGGCACTCCGAAAAGCAAC
AGCGGAAGATGCATGAAAAAGAATCACATGGTCCGACGCTTAGGTTCTGG
TCGAAGCATAGAGGCAGGTACGCCCCAACAATGATGATCAGCTGTCCAAA
GACCACAAATGTCTGCAGGAATTTGGATTATGACGGCAGAGAGTGTCCAA
GCTTCCATAAGGGCAGAAATAATGAAGAGCAAATGTGGTAGTCATGACGA
AAAGAAAGTTGTAATGAAGAACATCGGCTGAGAACGGTATTGTGTGGAGA
AACTTTCCACGGAAAAAAGAAGTGGTGTACTCCACGCGCTTCCGCGCTTG
CGTGTTTACTGTGCTTGTTGGCACTGAAAATCGGCTATTTTCAGAAATGC
TGTTCGCTATTTAGAGTTGGCAAGTGGAAGTCGTACTACGAAGGTAACAA
TAAACACTCAAGCGCCTGC back to topprotein sequence of rna6935 >rna6935-protein ID=rna6935-protein|Name=rna6935|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MDVKVWLDELDVNGLLAPHALLSMFERGRSDALGGPDRLEALMAEGFMFV
VARLDGYPMPLWCVSR back to topmRNA from alignment at CM002470.1:55846..56655+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6935 ID=rna6935|Name=rna6935|organism=Nannochloropsis gaditana|type=mRNA|length=810bp|location=Sequence derived from alignment at CM002470.1:55846..56655+ (Nannochloropsis gaditana)
ATGGATGTTAAGGTGTGGCTGGATGAGCTCGACGTGAATGGCCTTTTGGC
CCCTCATGCGCTCCTCTCCATGTTCGAGCGGGGACGAAGCGATGCTCTGG
GGGTGCGTGGTTCTTGTGCACTGATCCGTTTCGACCATCATTGGACACGG
AGTAAAGATATATGCACGTATACGTGCAAGTCGTTACCCCCACGCATTTA
TATTGATTCGATCCCATGTAATAATATACCTATTTGAATGTCGTTATATC
ACGTTGTAACGTTCATTCGACTCAAGCTAACGATCTACGTTTGTGCATCT
CGTCATCCCGAGTCGACTACCAAGGCGACGTCCCCCTCTCACAAAaggcc
ttttttccctccctcttcaacaTAAATGCAGGGGCCGGACCGCTTGGAGG
CCCTGATGGCAGAGGGGTTCATGTTCGTCGTCGCTCGTCTCGACGGGTAC
GGCGGCCCCttcgcccttctctccctccccccctccctagggccgcccct
ccccctctcacATACAcacgttcttcctccttcgtctaCCGTCGGCAAGA
TTgacgcttccccctccgtcccatcCTTTCAGCTCTCTCTCAGCTTAACt
gtgtccctcctcttgtccttcacctcctccttccccctccctctccttcc
ctccttccgtccctccttttctccctccttccctcatccccccctgCCTA
CTCCAGCTACCGTTTCtatccctccatttccatcaaGGAAGGTGCCGCCC
TTCAAGTGCTAGGGAAATTCCGCGCCAAAAGCGATGCCATTGTGGTGTGT
Cagcaggtag back to topCoding sequence (CDS) from alignment at CM002470.1:55846..56655+ >rna6935 ID=rna6935|Name=rna6935|organism=Nannochloropsis gaditana|type=CDS|length=804bp|location=Sequence derived from alignment at CM002470.1:55846..56655+ (Nannochloropsis gaditana)
ATGGATGTTAAGGTGTGGCTGGATGAGCTCGACGTGAATGGCCTTTTGGC
CCCTCATGCGCTCCTCTCCATGTTCGAGCGGGGACGAAGCGATGCTCTGG
GGGGGCCGGACCGCTTGGAGGCCCTGATGGCAGAGGGGTTCATGTTCGTC
GTCGCTCGTCTCGACGGCTACCCGATGCCATTGTGGTGTGTCagcaggta
gATGGATGTTAAGGTGTGGCTGGATGAGCTCGACGTGAATGGCCTTTTGG
CCCCTCATGCGCTCCTCTCCATGTTCGAGCGGGGACGAAGCGATGCTCTG
GGGGGGCCGGACCGCTTGGAGGCCCTGATGGCAGAGGGGTTCATGTTCGT
CGTCGCTCGTCTCGACGGCTACCCGATGCCATTGTGGTGTGTCagcaggt
agATGGATGTTAAGGTGTGGCTGGATGAGCTCGACGTGAATGGCCTTTTG
GCCCCTCATGCGCTCCTCTCCATGTTCGAGCGGGGACGAAGCGATGCTCT
GGGGGGGCCGGACCGCTTGGAGGCCCTGATGGCAGAGGGGTTCATGTTCG
TCGTCGCTCGTCTCGACGGCTACCCGATGCCATTGTGGTGTGTCagcagg
tagATGGATGTTAAGGTGTGGCTGGATGAGCTCGACGTGAATGGCCTTTT
GGCCCCTCATGCGCTCCTCTCCATGTTCGAGCGGGGACGAAGCGATGCTC
TGGGGGGGCCGGACCGCTTGGAGGCCCTGATGGCAGAGGGGTTCATGTTC
GTCGTCGCTCGTCTCGACGGCTACCCGATGCCATTGTGGTGTGTCagcag
gtag back to top
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