EWM23754.1, cds6919 (CDS) Nannochloropsis gaditana

Overview
NameEWM23754.1
Unique Namecds6919
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:55846..55947 +
Alignment locationCM002470.1:56227..56291 +
Alignment locationCM002470.1:56552..56556 +
Alignment locationCM002470.1:56627..56655 +

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Properties
Property NameValue
Protein idEWM23754.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102336g1.2576.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:55846..55947 +
CM002470.1supercontigCM002470.1:56227..56291 +
CM002470.1supercontigCM002470.1:56552..56556 +
CM002470.1supercontigCM002470.1:56627..56655 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029069HotDog_dom
Homology
[Close]
BLAST of EWM23754.1 vs. NCBI_GenBank
Match: gi|585104956|gb|EWM23754.1| (hypothetical protein Naga_102336g1 [Nannochloropsis gaditana])

HSP 1 Score: 134.035 bits (336), Expect = 7.786e-40
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MDVKVWLDELDVNGLLAPHALLSMFERGRSDALGGPDRLEALMAEGFMFVVARLDGYPMPLWCVSR 66
            MDVKVWLDELDVNGLLAPHALLSMFERGRSDALGGPDRLEALMAEGFMFVVARLDGYPMPLWCVSR
Sbjct:    1 MDVKVWLDELDVNGLLAPHALLSMFERGRSDALGGPDRLEALMAEGFMFVVARLDGYPMPLWCVSR 66
The following BLAST results are available for this feature:
BLAST of EWM23754.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104956|gb|EWM23754.1|7.786e-40100.00hypothetical protein Naga_102336g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6935rna6935Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications