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Properties
| Property Name | Value |
|---|
| Product | atp-binding cassette sub-family d member 3 |
| Orig transcript id | gnl|cribi|Naga_101730g1.1312.mrna |
| Orig protein id | gnl|cribi|Naga_101730g1.1312 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:44127..45821 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6930 ID=rna6930|Name=rna6930|organism=Nannochloropsis gaditana|type=mRNA|length=1099bp
CGTCAAGGGTGCAACGAAGATCAACTAGGCTGATGACTTGAAGTGCCTGT
TCCTTTTCCAGCACTTGTCACAGCCTTCTTGACGCCCCCATGCCTCCCAG
GAATAAAGTTGTGTACTTTTCGGACAGAAGAGAAGCTAGTTTAATTTTAC
TCGCCGTTTTATCGAGGGACTGGTCCTTTGTGTGTTTGAATACTCTTCCC
TCCCACCTCTCCCGTTTACCTCCTCAGCCCCCCCCGCAGTGATGGCCCCT
TCCTTCTCCCATCGCGGTCAAAAACGGCACGACAATGTGGTTTCTGCTTT
TTTCAACTCCTTTATGTCCGCTGGCGAGCAAAAATTCACGGTGGTCTCAT
CCTTTTTCTCGAGCGGGTTGTTCCTAGTTGCCTTAGCCCTCGTGAAACAG
CTGTCGAGCCTACAAGAGCAAGAAGAAAAGGTTGCTGCGTCCCTAGAACG
CCAAGATCCAAGCAAGGAAGGAGGAAGCCTGGCGGCGCCCTTGCCCCGGC
CTGACGGCAGGTGCCAGACCCCCCAGCCTCCCCCTCCCTCACCCCCACCC
TCCGCCTCGCCCTCCTCCTTCTCAGCGACCTCCACAGCCCGGACTAGGAG
TCCCAATGCCGATGCTTTGACGAGGTCGGGGAGGGATGCTGCCGGCCATG
GAGAAAGAGGGAGCGGGGGCATGAGGAGACCAGGCGGCCCTCCGCGACCG
CAGGAAGGGCAGAGGGTGGCTCTGGACGATGAATTCGGAAGGCAGCTCTT
AAGCCTTCTCCACAAATTAATCCCCAGCTGGAAGACGCGTGAAGCCGCCT
GCCTGGGAGGCATGGTTTTCCTCCTCCTGGCTCGCAGCGCCTGTGACTTG
CGAATGATAAACCTGGTGGTGGGGGCGGAGAAAGCGATCGTGTTGGGCAA
TCGGCCCGCCTTCAGGATCTCTTTGGCGCGCTTTTTAAGATTCATGGTGC
CTGTGGCCTGTGTGAATGCCCTGCTCAAGTACACAACGAGAGAGCTCTCT
CTTGGCCTCCGTCAACGACTCACAGAGCATCTTCAGTCTAAATACATGAA
AGGCTTTACCTTCTACTCTATGGCGGTCATGGAAGGGCATGCGAGGTAG back to topprotein sequence of rna6930 >rna6930-protein ID=rna6930-protein|Name=rna6930|organism=Nannochloropsis gaditana|type=polypeptide|length=198bp
MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLF
SSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGRE
KNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNRAAQ
VPPASSLPPSLPPSLLPSFPSILSPCLLLAGVLRADCRDHLDVDRSRL back to topmRNA from alignment at CM002470.1:44127..45821+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6930 ID=rna6930|Name=rna6930|organism=Nannochloropsis gaditana|type=mRNA|length=1695bp|location=Sequence derived from alignment at CM002470.1:44127..45821+ (Nannochloropsis gaditana)
GCACAGGGAAATCGAGCAGCTTATGACCGTGGACGTGGACAAGTTCTCCC
TGTGCATTACGGGTAAGATCTTtctgccgccctcccacccctccctccct
ccctccctccctccctctcttttcattctttttcttcctgggcgcctctc
tttctctacctccctcaactccctcccttgcaccCCTTCTAtgacactcc
ctccctccctctttccccccctcgctcttttccttccgcaCGCAACATGC
CTTGCACTGCGCCAATATCGAACCtgtctctcctcgcccttcctcccttc
cttcttccctccctttcttttttaGAGCTGGCCTCAAACCTCCTAAAGCC
AACCCTTGATATTCTTCTTTACGCAACAAAATTACAAACCTCGGTaggga
gatagggagggagggaaagagggggacagAGCATGCGTGTCAAGATTACG
GAAAGAGGACTGTTAAGGCGGGCATATCGGTGACAAGAGTATCGATGACG
CTCGAgatcccctcctttcgtcctTTTCCACCGCTTTTCATCCACCAgct
ttgccttttccctctctgtcATCCTCAAGCTCATGGTGTTCCTAGGCTTC
TCCCGTCCGAATGCGAATCTCGCCCTGGATCCTACCCCCAGTTCCAGccc
taatcctaaccctagttctaaccctaaccctaaccctaaccctagcccta
aaCCTAGCCCTAACACCTTTACCCGGATCTTTCACTCGTGCAGGTCGGTC
CCCTGATCCCGTTAGCCATGGCTAGctacctcttctcctctggCACAGCC
TTGACGCGCCTGCGAAGACCTGCCGCAGAGTATACGGtacgaaggggggg
aaggtgggagggagggagggatggtgggagggaaggagggagggaggcaa
ggggagcGGTAGGATGTTGAAATGGGGAACAGACATGGAACAAACGTGTG
GTCCATTCGGAGGCGCGCTTCATCATTTAAAATGTTCTtatcctctcttt
ctccctccgttctcccctctctccctccctcccccaggccgcGATCCAAC
GGCGCGAGGGCGACTACAGATTTGTGACGAATAGAATGGTCGCGCACGCC
GAAGAGATCGCTTTCTACGAtggagtggggagggaaaaaaactACCTGCA
GCGGATCTTCGGTTCTTTGTTGGGtacgaaaggagggagagagggaggga
aggagggagggcagggacgaGAACCTgacaggagagaggagaagggggcg
ggagagcggtAGCGCGAGCAAAAAAGCGaagattttcttttttcctgaaG
TATTGGTCTGCTCTGGTATTCCCCAATGACACCTTCTCCTCTATATGAGC
CACCTTCCCATCTACacctttcctgcctctctgcctccttccttaccctt
cccccccccctcctccctctctccccccagGAACGATCCGGCGCGGCTCC
CGGTTCCGCCACGCGATGGACATCCTCGATAGTGTCATGGCCAAGTACAT
AGCCACCGCTCTTGGCTGGATGCTTTTGAATCGCGCGGCTCAGGTAcccc
cggcttcctccctccctccctccctccctccctccctccttccttccttc
ccttctatTCTCTCGCCTTGCTTACTCTTGGCGGGTGTTCTCAGGGCAGA
TTGCAGGGATCATCTTGATGTGGATAGATCTCGGTTGTAATGGGT back to topCoding sequence (CDS) from alignment at CM002470.1:44127..45821+ >rna6930 ID=rna6930|Name=rna6930|organism=Nannochloropsis gaditana|type=CDS|length=2985bp|location=Sequence derived from alignment at CM002470.1:44127..45821+ (Nannochloropsis gaditana)
ATGACCGTGGACGTGGACAAGTTCTCCCTGTGCATTACGGAGCTGGCCTC
AAACCTCCTAAAGCCAACCCTTGATATTCTTCTTTACGCAACAAAATTAC
AAACCTCGGTCGGTCCCCTGATCCCGTTAGCCATGGCTAGctacctcttc
tcctctggCACAGCCTTGACGCGCCTGCGAAGACCTGCCGCAGAGTATAC
GgccgcGATCCAACGGCGCGAGGGCGACTACAGATTTGTGACGAATAGAA
TGGTCGCGCACGCCGAAGAGATCGCTTTCTACGAtggagtggggagggaa
aaaaactACCTGCAGCGGATCTTCGGTTCTTTGTTGGGAACGATCCGGCG
CGGCTCCCGGTTCCGCCACGCGATGGACATCCTCGATAGTGTCATGGCCA
AGTACATAGCCACCGCTCTTGGCTGGATGCTTTTGAATCGCGCGGCTCAG
GTAcccccggcttcctccctccctccctccctccctccctccctccttcc
ttccttcccttctatTCTCTCGCCTTGCTTACTCTTGGCGGGTGTTCTCA
GGGCAGATTGCAGGGATCATCTTGATGTGGATAGATCTCGGTTGTAAATG
ACCGTGGACGTGGACAAGTTCTCCCTGTGCATTACGGAGCTGGCCTCAAA
CCTCCTAAAGCCAACCCTTGATATTCTTCTTTACGCAACAAAATTACAAA
CCTCGGTCGGTCCCCTGATCCCGTTAGCCATGGCTAGctacctcttctcc
tctggCACAGCCTTGACGCGCCTGCGAAGACCTGCCGCAGAGTATACGgc
cgcGATCCAACGGCGCGAGGGCGACTACAGATTTGTGACGAATAGAATGG
TCGCGCACGCCGAAGAGATCGCTTTCTACGAtggagtggggagggaaaaa
aactACCTGCAGCGGATCTTCGGTTCTTTGTTGGGAACGATCCGGCGCGG
CTCCCGGTTCCGCCACGCGATGGACATCCTCGATAGTGTCATGGCCAAGT
ACATAGCCACCGCTCTTGGCTGGATGCTTTTGAATCGCGCGGCTCAGGTA
cccccggcttcctccctccctccctccctccctccctccctccttccttc
cttcccttctatTCTCTCGCCTTGCTTACTCTTGGCGGGTGTTCTCAGGG
CAGATTGCAGGGATCATCTTGATGTGGATAGATCTCGGTTGTAAATGACC
GTGGACGTGGACAAGTTCTCCCTGTGCATTACGGAGCTGGCCTCAAACCT
CCTAAAGCCAACCCTTGATATTCTTCTTTACGCAACAAAATTACAAACCT
CGGTCGGTCCCCTGATCCCGTTAGCCATGGCTAGctacctcttctcctct
ggCACAGCCTTGACGCGCCTGCGAAGACCTGCCGCAGAGTATACGgccgc
GATCCAACGGCGCGAGGGCGACTACAGATTTGTGACGAATAGAATGGTCG
CGCACGCCGAAGAGATCGCTTTCTACGAtggagtggggagggaaaaaaac
tACCTGCAGCGGATCTTCGGTTCTTTGTTGGGAACGATCCGGCGCGGCTC
CCGGTTCCGCCACGCGATGGACATCCTCGATAGTGTCATGGCCAAGTACA
TAGCCACCGCTCTTGGCTGGATGCTTTTGAATCGCGCGGCTCAGGTAccc
ccggcttcctccctccctccctccctccctccctccctccttccttcctt
cccttctatTCTCTCGCCTTGCTTACTCTTGGCGGGTGTTCTCAGGGCAG
ATTGCAGGGATCATCTTGATGTGGATAGATCTCGGTTGTAAATGACCGTG
GACGTGGACAAGTTCTCCCTGTGCATTACGGAGCTGGCCTCAAACCTCCT
AAAGCCAACCCTTGATATTCTTCTTTACGCAACAAAATTACAAACCTCGG
TCGGTCCCCTGATCCCGTTAGCCATGGCTAGctacctcttctcctctggC
ACAGCCTTGACGCGCCTGCGAAGACCTGCCGCAGAGTATACGgccgcGAT
CCAACGGCGCGAGGGCGACTACAGATTTGTGACGAATAGAATGGTCGCGC
ACGCCGAAGAGATCGCTTTCTACGAtggagtggggagggaaaaaaactAC
CTGCAGCGGATCTTCGGTTCTTTGTTGGGAACGATCCGGCGCGGCTCCCG
GTTCCGCCACGCGATGGACATCCTCGATAGTGTCATGGCCAAGTACATAG
CCACCGCTCTTGGCTGGATGCTTTTGAATCGCGCGGCTCAGGTAcccccg
gcttcctccctccctccctccctccctccctccctccttccttccttccc
ttctatTCTCTCGCCTTGCTTACTCTTGGCGGGTGTTCTCAGGGCAGATT
GCAGGGATCATCTTGATGTGGATAGATCTCGGTTGTAAATGACCGTGGAC
GTGGACAAGTTCTCCCTGTGCATTACGGAGCTGGCCTCAAACCTCCTAAA
GCCAACCCTTGATATTCTTCTTTACGCAACAAAATTACAAACCTCGGTCG
GTCCCCTGATCCCGTTAGCCATGGCTAGctacctcttctcctctggCACA
GCCTTGACGCGCCTGCGAAGACCTGCCGCAGAGTATACGgccgcGATCCA
ACGGCGCGAGGGCGACTACAGATTTGTGACGAATAGAATGGTCGCGCACG
CCGAAGAGATCGCTTTCTACGAtggagtggggagggaaaaaaactACCTG
CAGCGGATCTTCGGTTCTTTGTTGGGAACGATCCGGCGCGGCTCCCGGTT
CCGCCACGCGATGGACATCCTCGATAGTGTCATGGCCAAGTACATAGCCA
CCGCTCTTGGCTGGATGCTTTTGAATCGCGCGGCTCAGGTAcccccggct
tcctccctccctccctccctccctccctccctccttccttccttcccttc
tatTCTCTCGCCTTGCTTACTCTTGGCGGGTGTTCTCAGGGCAGATTGCA
GGGATCATCTTGATGTGGATAGATCTCGGTTGTAA back to top
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