EWM23759.1, cds6914 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|585104965|gb|EWM23759.1| (atp-binding cassette sub-family d member 3 [Nannochloropsis gaditana]) HSP 1 Score: 400.208 bits (1027), Expect = 4.395e-141 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNRAAQVPPASSLPPSLPPSLLPSFPSILSPCLLLAGVLRADCRDHLDVDRSRL 198
MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNRAAQVPPASSLPPSLPPSLLPSFPSILSPCLLLAGVLRADCRDHLDVDRSRL
Sbjct: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNRAAQVPPASSLPPSLPPSLLPSFPSILSPCLLLAGVLRADCRDHLDVDRSRL 198
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|1173960541|gb|OQS06657.1| (ATP-binding Cassette (ABC) Superfamily [Thraustotheca clavata]) HSP 1 Score: 147.902 bits (372), Expect = 1.390e-37 Identity = 69/147 (46.94%), Postives = 100/147 (68.03%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+TVDV++F+ + +L SN+ KP LDI +YA KL ++G P M SYL SG LT LR+P +T A QR EG+YR++ R++ H EEIAFY+G RE + +Q F SL+ IR+ +FR +M ++D+V+AKY AT LG+ L++R
Sbjct: 922 LTVDVERFATSVADLYSNITKPLLDIAIYAVKLTGTIGLAGPTTMLSYLIGSGMFLTWLRQPTGRFTIAEQRLEGNYRYINARLITHGEEIAFYNGNKREASIIQSSFDSLVKLIRQSQQFRFSMSVIDNVIAKYFATVLGFFLVSR 1068
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|813172032|ref|XP_012204771.1| (hypothetical protein SPRG_10324 [Saprolegnia parasitica CBS 223.65] >gi|641530384|gb|KDO24509.1| hypothetical protein SPRG_10324 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 146.747 bits (369), Expect = 1.791e-37 Identity = 70/147 (47.62%), Postives = 101/147 (68.71%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+TVDV++F+ + +L SN+ KP LDI +YA KL ++G P+ M SYL SG LT LR+P +T A QR EG YR++ R++ H EEIAFY+G RE + LQ F +L+ IR+ +FR +M ++DSV+AKY AT LG++L++R
Sbjct: 184 LTVDVERFATSVADLYSNVTKPILDIGIYAVKLTGTIGLAGPMTMLSYLVGSGMFLTWLRQPTGRFTIAEQRLEGAYRYINARLITHGEEIAFYNGNKREASILQASFDALVSLIRQSQQFRFSMSVIDSVIAKYFATVLGFVLVSR 330
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|669154950|ref|XP_008613037.1| (ATP-binding cassette, subfamily D (ALD), member 3 [Saprolegnia diclina VS20] >gi|530735155|gb|EQC33397.1| ATP-binding cassette, subfamily D (ALD), member 3 [Saprolegnia diclina VS20]) HSP 1 Score: 146.747 bits (369), Expect = 1.791e-37 Identity = 70/147 (47.62%), Postives = 101/147 (68.71%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+TVDV++F+ + +L SN+ KP LDI +YA KL ++G P+ M SYL SG LT LR+P +T A QR EG YR++ R++ H EEIAFY+G RE + LQ F +L+ IR+ +FR +M ++DSV+AKY AT LG++L++R
Sbjct: 184 LTVDVERFATSVADLYSNVTKPLLDIGIYAVKLTGTIGLAGPMTMLSYLVGSGMFLTWLRQPTGRFTIAEQRLEGAYRYINARLITHGEEIAFYNGNKREASILQSSFDALVSLIRQSQQFRFSMSVIDSVIAKYFATVLGFVLVSR 330
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|1173931395|gb|OQR83825.1| (ATP-binding Cassette (ABC) Superfamily [Achlya hypogyna]) HSP 1 Score: 145.206 bits (365), Expect = 5.248e-37 Identity = 70/147 (47.62%), Postives = 100/147 (68.03%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+TVDV++F+ + +L SN+ KP LDI +YA KL ++G P M SYL SG LT LR+P +T A QR EG YR++ R++ H EEIAFY+G RE + LQ F SL+ IR+ +FR +M ++D+V+AKY AT LG++L++R
Sbjct: 184 LTVDVERFATSVADLYSNVTKPLLDIGIYAVKLTGTIGLAGPATMLSYLVGSGMFLTWLRQPTGRFTIAEQRLEGAYRYINARLITHGEEIAFYNGNKREASILQSSFDSLVSLIRQSQQFRFSMSVIDNVIAKYFATVLGFVLVSR 330
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|298708548|emb|CBJ49181.1| (peroxisomal membrane protein 70 abcd3, putative [Ectocarpus siliculosus]) HSP 1 Score: 145.591 bits (366), Expect = 6.431e-37 Identity = 66/147 (44.90%), Postives = 101/147 (68.71%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+T DV++F+ + EL SN+ KP LD+L+Y +L V + P M +YL SG AL+ LR+P A YTA + ++EG+YR+V +R++ +A+EIAFY G +EK L+ +F L+ RR RFRH++ LDSV+AKY A+ +GW +++R
Sbjct: 66 ITQDVERFAASMAELFSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSR 212
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|301091276|ref|XP_002895826.1| (ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] >gi|262096576|gb|EEY54628.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 143.665 bits (361), Expect = 2.440e-36 Identity = 66/147 (44.90%), Postives = 105/147 (71.43%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+TVDV++FS + +L SN+ KP LDI +YA KL +S+G P+ M SYL +SG LT LR+P + +T A Q+ EG++RF+ +R++ H+EEIAFY+G REK L + F L+ +R +FR +M ++D+++AKY+AT +G+ +L++
Sbjct: 187 LTVDVERFSNSVADLYSNMSKPVLDIAIYAVKLSSSIGVEGPVIMLSYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHSEEIAFYNGNVREKRILDQSFTRLIDLVRSSQQFRFSMSVIDNIVAKYLATVVGYAVLSK 333
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|675162225|ref|XP_008889997.1| (hypothetical protein PPTG_00365 [Phytophthora parasitica INRA-310] >gi|566034308|gb|ETI57219.1| hypothetical protein F443_00446 [Phytophthora parasitica P1569] >gi|567971984|gb|ETK96979.1| hypothetical protein L915_00413 [Phytophthora parasitica] >gi|568000305|gb|ETL50326.1| hypothetical protein L916_00416 [Phytophthora parasitica] >gi|568029460|gb|ETM03386.1| hypothetical protein L917_00388 [Phytophthora parasitica] >gi|568060102|gb|ETM56645.1| hypothetical protein L914_00416 [Phytophthora parasitica] >gi|568109255|gb|ETN23862.1| hypothetical protein PPTG_00365 [Phytophthora parasitica INRA-310] >gi|570338014|gb|ETO85962.1| hypothetical protein F444_00443 [Phytophthora parasitica P1976] >gi|570934206|gb|ETO99462.1| hypothetical protein F441_23126 [Phytophthora parasitica CJ01A1] >gi|570962011|gb|ETP26990.1| hypothetical protein F441_00443 [Phytophthora parasitica CJ01A1] >gi|570998824|gb|ETP54954.1| hypothetical protein F442_00438 [Phytophthora parasitica P10297] >gi|970650585|gb|KUF89586.1| hypothetical protein AM588_10002340 [Phytophthora nicotianae] >gi|970652946|gb|KUF91512.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora nicotianae]) HSP 1 Score: 143.28 bits (360), Expect = 2.711e-36 Identity = 66/147 (44.90%), Postives = 105/147 (71.43%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+TVDV++FS + +L SN+ KP LDI +YA KL +S+G P+ M SYL +SG LT LR+P + +T A Q+ EG++RF+ +R++ H+EEIAFY+G REK L + F L+ +R +FR +M ++D+++AKY+AT +G+ +L++
Sbjct: 187 LTVDVERFSNSVADLYSNMSKPLLDIAIYAVKLSSSIGVEGPVIMLSYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHSEEIAFYNGNVREKRILDQSFSRLIDLVRSSQQFRFSMSVIDNIVAKYLATVVGYAVLSK 333
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|966702803|gb|KTG35044.1| (hypothetical protein cypCar_00045206 [Cyprinus carpio]) HSP 1 Score: 141.354 bits (355), Expect = 2.964e-36 Identity = 69/147 (46.94%), Postives = 100/147 (68.03%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+T DV+KF + +L SN+ KP LDIL+Y KL T++G L P ++ SYL SG LTRLRRP + T QR EG YR+V +R++ ++EEIAFY+G REK + F L+ + R FR +M +LDS++AKYIA A+G+++++R
Sbjct: 37 ITQDVEKFCDSVVDLYSNVSKPLLDILIYICKLNTAIGSLGPASLLSYLLFSGLLLTRLRRPIGKMTVTEQRYEGQYRYVNSRLITNSEEIAFYNGNRREKQTINGTFQKLVDHLSRFIHFRFSMGVLDSIIAKYIAMAVGYLVISR 183
BLAST of EWM23759.1 vs. NCBI_GenBank
Match: gi|1176057190|ref|XP_020605103.1| (ATP-binding cassette sub-family D member 3-like [Orbicella faveolata]) HSP 1 Score: 139.043 bits (349), Expect = 3.507e-36 Identity = 67/147 (45.58%), Postives = 99/147 (67.35%), Query Frame = 0
Query: 1 MTVDVDKFSLCITELASNLLKPTLDILLYATKLQTSVGPLIPLAMASYLFSSGTALTRLRRPAAEYTAAIQRREGDYRFVTNRMVAHAEEIAFYDGVGREKNYLQRIFGSLLGTIRRGSRFRHAMDILDSVMAKYIATALGWMLLNR 147
+T DVDKF + EL SN+ KP LDI++Y KL ++G P M +YL SG LTRLRRP TA Q EG++RFV +R++ ++EEIAFY G REK +++ F L+ +R +FR +M I+D+++AKY+AT +G+M+++R
Sbjct: 200 LTQDVDKFCNSLAELYSNISKPLLDIVIYVQKLTGAIGIQGPTIMLAYLAVSGLLLTRLRRPVGRMTAEEQHHEGEFRFVNSRLITNSEEIAFYQGGKREKFTIEKTFQRLVDHLRNFIQFRFSMGIIDNIIAKYVATVVGFMVVSR 346 The following BLAST results are available for this feature:
BLAST of EWM23759.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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