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Properties
| Property Name | Value |
|---|
| Product | atp-binding cassette sub-family d member 3 |
| Orig transcript id | gnl|cribi|Naga_101131g2.3822.mrna |
| Orig protein id | gnl|cribi|Naga_101131g2.3822 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:42141..43970 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6929 ID=rna6929|Name=rna6929|organism=Nannochloropsis gaditana|type=mRNA|length=1048bp
CCCTCGAGTACGAAAATGCATGAAAAAAGCCAAGCAAAAGGTGGGCCGTT
GTGTGGAGGCGGAAAAGTGTGTACTGCGGGGGAGCAAGAGCGTCTACAGC
GCGGACTTCTTTGCTCGCGTGCATGGCGTTGCTGAGACAGTGTGTGGTTC
CTGCCAGTGGTGTAGGGGGCAAGCGCCCGCTGCCTCCCGTTCTTTGAGAA
GCCACCCCCGTTGCCTGTCCATTCCGCATACATGTGTGGACACGTAGGCG
TGTTCGTGTGGATGCAGTTTGGGAGGATGCCAGGATATTGGGTGACCTGA
GGATATGGGTGGAGGACAGGATACTATACGTACGAGCTTTGTAGACGTGT
ACTTTGAAGGCAAATATGGACCCTGCGGATGACCATTGCGATGCTTTCAC
ACAGTTTGTCGCTCTTGTCTATCAGAAAGAAGGTAGAAAATGGTAACTGG
ACCACAGTTTAGGTTGTGAATGCCTATTTTTCGTCTGCTTGGGTAGTGCG
GCGGCTGATTGCATGACTGACCTCATCCGTATTTCACCCCTCCATCTTTC
CTCCCCTCTTTCCCGCCCGCCGAACGACAGTACCATGGTCAAAGCCAGTC
TCTGCATCCTGAGCCTTGCGGCAGTCGCCCAAGGCTTCCTCCTTCCCGTC
CCCGCGCCGCACAGACCACCAAGTTCCACCCAGCTCGCTGCCTCCGCCTT
CACGACGGTTTCGGGACGCATAGTGGAGGATCCCAAGGGCGAACTGCAAA
AAGTACTCACACCGTCGCCCAAAGACGAGGCACGACGGGCGCGTGTGGCC
AAGGTGCTGGAGGCAGCCGGGTTGCAATATACGGGCGAGGCGATTTTCTC
GTCTAATCGATGGTACGGGGGGGCTGTCTATCGCGATTTCACCGACGCGG
TGGGTGTAGAACCTGCCGATCAGGTACCGAGGGAGGGAGGTCGAGGAAGA
GGGAGAGGGAGGGAGGGAGGAAGGGAGGGCGTGTGAAAATGTGGCCCCTC
AATCTCGTTAATCGCATCCATGCGGCTTGTCACGTTTCGGTCCGCGTT back to topprotein sequence of rna6929 >rna6929-protein ID=rna6929-protein|Name=rna6929|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp
MAPSFSHRGQKRHDNVVSAFFNSFMSAGEQKFTVVSSFFSSGLFLVALAL
VKQLSSLQEQEEKVAASLERQDPSKEGGSLAAPLPRPDGRCQTPQPPPPS
PPPSASPSSFSATSTARTRSPNADALTRSGRDAAGHGERGSGGMRRPGGP
PRPQEGQRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSA
CDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTR
ELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEGHAR back to topmRNA from alignment at CM002470.1:42141..43970+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6929 ID=rna6929|Name=rna6929|organism=Nannochloropsis gaditana|type=mRNA|length=1830bp|location=Sequence derived from alignment at CM002470.1:42141..43970+ (Nannochloropsis gaditana)
CGTCAAGGGTGCAACGAAGATCAACTAGGCTGATGACTTGAAGTGCCTGT
TCCTTTTCCAGCACTTGTCACAGCCTTCTTGACGcccccatgcctcccag
GAATAAAGTTGTGTACTTTTCGGACAGAAGAGAAGCTAGTTTAATTTTAC
TCGCCGTTTTATCGAGGGACTGGTCCTTTGTGTGTTTGAAtactcttccc
tcccacctctcccgTTTACCTCCTCAGCCCCCCCCGCAGTGatggcccct
tccttctcccatcgCGGTCAAAAACGGCACGACAATGTGGTTTCTGCTTT
TTTCAACTCCTTTATGTCCGCTGGCGAGCAAAAATTCACGGTGGTCTCAT
CCTTTTTCTCGAGCGGGTTGTTCCTAGTTGCCTTAGCCCTCGTGAAACAG
CTGTCGAGGTGAGAGCGCTGAGGGAAGGCTTCAAGAAGGGTCGAAAGAAT
TTGCCAGTTCGTCTCTCTGTAATGAATGTCTCACTAGGTTTCGCCTGGCT
TGTGTAGGTCGTGACCTGGAAGGCATGTGTCATGATGGAGGGACTTGgaa
cttccccccccaccagaACCACAACACATCGCaatacctcctcccacccc
ctaCCCCAGCCTacaagagcaagaagaaaaggtTGCTGCGTCCCTAGAAC
GCCAAGATCCaagcaaggaaggaggaagcctgGCGGCGCCCTTGCCCCGG
CCTGACGGCAGGTGCCAGAccccccagcctccccctccctcacccccacc
ctccgcctcgccctcctccttctcagcgACCTCCACAGCCCGGACTAGGA
GTCCCAATGCCGATGCTTTGAcgaggtcggggagggatgcTGCCGGccat
ggagaaagagggagcgggggcatGAGGAGACCAGGCGGCCCTCCGCGACC
GCAGGAAGGGCAGAGGGTGGCTCTGGACGATGAATTCGGAAGGCAGCTCT
TAAGCCTTCTCCACAAATTAATCCCCAGCTGGAAGACGGTGAGAAGGGGG
CGTGCAagctcggaggaggaggggaggagaggagcggTAattgaccctcc
ctctctctctctctccctccctcactcactccctctttccctccctcttt
ccctccctttccccaacaTTTCCCCACGTAGCGTGAAGCCGCCTGCCTGG
GAGGCAtggttttcctcctcctggctcgCAGCGCCTGTGACTTGCGAATG
ATAAacctggtggtgggggcggagaaagcgATCGTGTTGGGCAATCGGCC
CGCCTTCAGGATCTCTTTGGCGCGCTTTTTAAGGTGagggtcgggggagg
gagggaaggagagggggaaggaaggagataTGGGTGTTCGATGTGCGGGC
TGCAAAGCAGGTTCGTTGTCCCTCAAGCCTTGGATTTcaactcccctcct
cctcgtgctctctctcccacctccctcgctccctccctccctccctccct
ccctcagatTCATGGTGCCTGTGGCCTGTGTGAATGCCCTGCTCAAGTAC
ACAACGAGAGAGCTCTCTCTTGGCCTCCGTCAACGACTCACAGAGCATCT
TCAGgtacccgccctccctcccttactccctccctccctcccttactccc
tccctccctcccttactccctccctccctcttaccGTGTACTTGCTCGGA
CTTGTTTAGGGTGATTGCAGTCCTCACTATCCCCGttattccctccctcc
ctccctcctccttctctccctccctccctccctccttctcttcctccctc
ccttcccaccgccccAGTCTAAATACATGAAAGGCTTTACCTTCTACTCT
ATGGCGGTCATGGAAGGGCATGCGAGGTAG back to topCoding sequence (CDS) from alignment at CM002470.1:42141..43970+ >rna6929 ID=rna6929|Name=rna6929|organism=Nannochloropsis gaditana|type=CDS|length=4290bp|location=Sequence derived from alignment at CM002470.1:42141..43970+ (Nannochloropsis gaditana)
atggccccttccttctcccatcgCGGTCAAAAACGGCACGACAATGTGGT
TTCTGCTTTTTTCAACTCCTTTATGTCCGCTGGCGAGCAAAAATTCACGG
TGGTCTCATCCTTTTTCTCGAGCGGGTTGTTCCTAGTTGCCTTAGCCCTC
GTGAAACAGCTGTCGAGCCTacaagagcaagaagaaaaggtTGCTGCGTC
CCTAGAACGCCAAGATCCaagcaaggaaggaggaagcctgGCGGCGCCCT
TGCCCCGGCCTGACGGCAGGTGCCAGAccccccagcctccccctccctca
cccccaccctccgcctcgccctcctccttctcagcgACCTCCACAGCCCG
GACTAGGAGTCCCAATGCCGATGCTTTGAcgaggtcggggagggatgcTG
CCGGccatggagaaagagggagcgggggcatGAGGAGACCAGGCGGCCCT
CCGCGACCGCAGGAAGGGCAGAGGGTGGCTCTGGACGATGAATTCGGAAG
GCAGCTCTTAAGCCTTCTCCACAAATTAATCCCCAGCTGGAAGACGCGTG
AAGCCGCCTGCCTGGGAGGCAtggttttcctcctcctggctcgCAGCGCC
TGTGACTTGCGAATGATAAacctggtggtgggggcggagaaagcgATCGT
GTTGGGCAATCGGCCCGCCTTCAGGATCTCTTTGGCGCGCTTTTTAAGat
TCATGGTGCCTGTGGCCTGTGTGAATGCCCTGCTCAAGTACACAACGAGA
GAGCTCTCTCTTGGCCTCCGTCAACGACTCACAGAGCATCTTCAGTCTAA
ATACATGAAAGGCTTTACCTTCTACTCTATGGCGGTCATGGAAGGGCATG
CGAGGTAGatggccccttccttctcccatcgCGGTCAAAAACGGCACGAC
AATGTGGTTTCTGCTTTTTTCAACTCCTTTATGTCCGCTGGCGAGCAAAA
ATTCACGGTGGTCTCATCCTTTTTCTCGAGCGGGTTGTTCCTAGTTGCCT
TAGCCCTCGTGAAACAGCTGTCGAGCCTacaagagcaagaagaaaaggtT
GCTGCGTCCCTAGAACGCCAAGATCCaagcaaggaaggaggaagcctgGC
GGCGCCCTTGCCCCGGCCTGACGGCAGGTGCCAGAccccccagcctcccc
ctccctcacccccaccctccgcctcgccctcctccttctcagcgACCTCC
ACAGCCCGGACTAGGAGTCCCAATGCCGATGCTTTGAcgaggtcggggag
ggatgcTGCCGGccatggagaaagagggagcgggggcatGAGGAGACCAG
GCGGCCCTCCGCGACCGCAGGAAGGGCAGAGGGTGGCTCTGGACGATGAA
TTCGGAAGGCAGCTCTTAAGCCTTCTCCACAAATTAATCCCCAGCTGGAA
GACGCGTGAAGCCGCCTGCCTGGGAGGCAtggttttcctcctcctggctc
gCAGCGCCTGTGACTTGCGAATGATAAacctggtggtgggggcggagaaa
gcgATCGTGTTGGGCAATCGGCCCGCCTTCAGGATCTCTTTGGCGCGCTT
TTTAAGatTCATGGTGCCTGTGGCCTGTGTGAATGCCCTGCTCAAGTACA
CAACGAGAGAGCTCTCTCTTGGCCTCCGTCAACGACTCACAGAGCATCTT
CAGTCTAAATACATGAAAGGCTTTACCTTCTACTCTATGGCGGTCATGGA
AGGGCATGCGAGGTAGatggccccttccttctcccatcgCGGTCAAAAAC
GGCACGACAATGTGGTTTCTGCTTTTTTCAACTCCTTTATGTCCGCTGGC
GAGCAAAAATTCACGGTGGTCTCATCCTTTTTCTCGAGCGGGTTGTTCCT
AGTTGCCTTAGCCCTCGTGAAACAGCTGTCGAGCCTacaagagcaagaag
aaaaggtTGCTGCGTCCCTAGAACGCCAAGATCCaagcaaggaaggagga
agcctgGCGGCGCCCTTGCCCCGGCCTGACGGCAGGTGCCAGAcccccca
gcctccccctccctcacccccaccctccgcctcgccctcctccttctcag
cgACCTCCACAGCCCGGACTAGGAGTCCCAATGCCGATGCTTTGAcgagg
tcggggagggatgcTGCCGGccatggagaaagagggagcgggggcatGAG
GAGACCAGGCGGCCCTCCGCGACCGCAGGAAGGGCAGAGGGTGGCTCTGG
ACGATGAATTCGGAAGGCAGCTCTTAAGCCTTCTCCACAAATTAATCCCC
AGCTGGAAGACGCGTGAAGCCGCCTGCCTGGGAGGCAtggttttcctcct
cctggctcgCAGCGCCTGTGACTTGCGAATGATAAacctggtggtggggg
cggagaaagcgATCGTGTTGGGCAATCGGCCCGCCTTCAGGATCTCTTTG
GCGCGCTTTTTAAGatTCATGGTGCCTGTGGCCTGTGTGAATGCCCTGCT
CAAGTACACAACGAGAGAGCTCTCTCTTGGCCTCCGTCAACGACTCACAG
AGCATCTTCAGTCTAAATACATGAAAGGCTTTACCTTCTACTCTATGGCG
GTCATGGAAGGGCATGCGAGGTAGatggccccttccttctcccatcgCGG
TCAAAAACGGCACGACAATGTGGTTTCTGCTTTTTTCAACTCCTTTATGT
CCGCTGGCGAGCAAAAATTCACGGTGGTCTCATCCTTTTTCTCGAGCGGG
TTGTTCCTAGTTGCCTTAGCCCTCGTGAAACAGCTGTCGAGCCTacaaga
gcaagaagaaaaggtTGCTGCGTCCCTAGAACGCCAAGATCCaagcaagg
aaggaggaagcctgGCGGCGCCCTTGCCCCGGCCTGACGGCAGGTGCCAG
Accccccagcctccccctccctcacccccaccctccgcctcgccctcctc
cttctcagcgACCTCCACAGCCCGGACTAGGAGTCCCAATGCCGATGCTT
TGAcgaggtcggggagggatgcTGCCGGccatggagaaagagggagcggg
ggcatGAGGAGACCAGGCGGCCCTCCGCGACCGCAGGAAGGGCAGAGGGT
GGCTCTGGACGATGAATTCGGAAGGCAGCTCTTAAGCCTTCTCCACAAAT
TAATCCCCAGCTGGAAGACGCGTGAAGCCGCCTGCCTGGGAGGCAtggtt
ttcctcctcctggctcgCAGCGCCTGTGACTTGCGAATGATAAacctggt
ggtgggggcggagaaagcgATCGTGTTGGGCAATCGGCCCGCCTTCAGGA
TCTCTTTGGCGCGCTTTTTAAGatTCATGGTGCCTGTGGCCTGTGTGAAT
GCCCTGCTCAAGTACACAACGAGAGAGCTCTCTCTTGGCCTCCGTCAACG
ACTCACAGAGCATCTTCAGTCTAAATACATGAAAGGCTTTACCTTCTACT
CTATGGCGGTCATGGAAGGGCATGCGAGGTAGatggccccttccttctcc
catcgCGGTCAAAAACGGCACGACAATGTGGTTTCTGCTTTTTTCAACTC
CTTTATGTCCGCTGGCGAGCAAAAATTCACGGTGGTCTCATCCTTTTTCT
CGAGCGGGTTGTTCCTAGTTGCCTTAGCCCTCGTGAAACAGCTGTCGAGC
CTacaagagcaagaagaaaaggtTGCTGCGTCCCTAGAACGCCAAGATCC
aagcaaggaaggaggaagcctgGCGGCGCCCTTGCCCCGGCCTGACGGCA
GGTGCCAGAccccccagcctccccctccctcacccccaccctccgcctcg
ccctcctccttctcagcgACCTCCACAGCCCGGACTAGGAGTCCCAATGC
CGATGCTTTGAcgaggtcggggagggatgcTGCCGGccatggagaaagag
ggagcgggggcatGAGGAGACCAGGCGGCCCTCCGCGACCGCAGGAAGGG
CAGAGGGTGGCTCTGGACGATGAATTCGGAAGGCAGCTCTTAAGCCTTCT
CCACAAATTAATCCCCAGCTGGAAGACGCGTGAAGCCGCCTGCCTGGGAG
GCAtggttttcctcctcctggctcgCAGCGCCTGTGACTTGCGAATGATA
AacctggtggtgggggcggagaaagcgATCGTGTTGGGCAATCGGCCCGC
CTTCAGGATCTCTTTGGCGCGCTTTTTAAGatTCATGGTGCCTGTGGCCT
GTGTGAATGCCCTGCTCAAGTACACAACGAGAGAGCTCTCTCTTGGCCTC
CGTCAACGACTCACAGAGCATCTTCAGTCTAAATACATGAAAGGCTTTAC
CTTCTACTCTATGGCGGTCATGGAAGGGCATGCGAGGTAG back to top
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