EWM23760.1, cds6913 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|585104967|gb|EWM23760.1| (atp-binding cassette sub-family d member 3 [Nannochloropsis gaditana]) HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
Query: 1 MAPSFSHRGQKRHDNVVSAFFNSFMSAGEQKFTVVSSFFSSGLFLVALALVKQLSSLQEQEEKVAASLERQDPSKEGGSLAAPLPRPDGRCQTPQPPPPSPPPSASPSSFSATSTARTRSPNADALTRSGRDAAGHGERGSGGMRRPGGPPRPQEGQRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEGHAR 285
MAPSFSHRGQKRHDNVVSAFFNSFMSAGEQKFTVVSSFFSSGLFLVALALVKQLSSLQEQEEKVAASLERQDPSKEGGSLAAPLPRPDGRCQTPQPPPPSPPPSASPSSFSATSTARTRSPNADALTRSGRDAAGHGERGSGGMRRPGGPPRPQEGQRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEGHAR
Sbjct: 1 MAPSFSHRGQKRHDNVVSAFFNSFMSAGEQKFTVVSSFFSSGLFLVALALVKQLSSLQEQEEKVAASLERQDPSKEGGSLAAPLPRPDGRCQTPQPPPPSPPPSASPSSFSATSTARTRSPNADALTRSGRDAAGHGERGSGGMRRPGGPPRPQEGQRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEGHAR 285
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|1008932189|gb|KYK55277.1| (hypothetical protein DCS_07240 [Drechmeria coniospora]) HSP 1 Score: 100.523 bits (249), Expect = 4.137e-20 Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 0
Query: 117 RTRSPNADALTRSGRDAAGH-GERGSGGMRRPGGPPRPQEGQRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEGHAR 285
R R ++ S RDAA RG+ P P+ ++VAL+ EF R LL LL +IP W+T+E L F L+ R+ LR+ + KA+V GN F ++ ++ +P C N++L Y ELSL R RLT+H+ KY+ TFY ++ ++ +
Sbjct: 48 RVRHAISEQKAASIRDAAQRSARRGTVSTADDDDPAAPK--KKVALNREFFRSLLRLLKIVIPGWRTKETRLLISHSFFLVLRTLISLRVAEMDGAIVKALVKGNGKEFLTNIVWWMLIAIPATCTNSMLSYHQAELSLKYRSRLTQHIHDKYLSNLTFYGLSALDDRIK 215
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|1057464441|gb|ODA82108.1| (hypothetical protein RJ55_00613 [Drechmeria coniospora]) HSP 1 Score: 100.523 bits (249), Expect = 4.383e-20 Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 0
Query: 117 RTRSPNADALTRSGRDAAGH-GERGSGGMRRPGGPPRPQEGQRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEGHAR 285
R R ++ S RDAA RG+ P P+ ++VAL+ EF R LL LL +IP W+T+E L F L+ R+ LR+ + KA+V GN F ++ ++ +P C N++L Y ELSL R RLT+H+ KY+ TFY ++ ++ +
Sbjct: 48 RVRHAISEQKAASIRDAAQRSARRGTVSTADDDDPAAPK--KKVALNREFFRSLLRLLKIVIPGWRTKETRLLISHSFFLVLRTLISLRVAEMDGAIVKALVKGNGKEFLTNIVWWMLIAIPATCTNSMLSYHQAELSLKYRSRLTQHIHDKYLSNLTFYGLSALDDRIK 215
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|675162225|ref|XP_008889997.1| (hypothetical protein PPTG_00365 [Phytophthora parasitica INRA-310] >gi|566034308|gb|ETI57219.1| hypothetical protein F443_00446 [Phytophthora parasitica P1569] >gi|567971984|gb|ETK96979.1| hypothetical protein L915_00413 [Phytophthora parasitica] >gi|568000305|gb|ETL50326.1| hypothetical protein L916_00416 [Phytophthora parasitica] >gi|568029460|gb|ETM03386.1| hypothetical protein L917_00388 [Phytophthora parasitica] >gi|568060102|gb|ETM56645.1| hypothetical protein L914_00416 [Phytophthora parasitica] >gi|568109255|gb|ETN23862.1| hypothetical protein PPTG_00365 [Phytophthora parasitica INRA-310] >gi|570338014|gb|ETO85962.1| hypothetical protein F444_00443 [Phytophthora parasitica P1976] >gi|570934206|gb|ETO99462.1| hypothetical protein F441_23126 [Phytophthora parasitica CJ01A1] >gi|570962011|gb|ETP26990.1| hypothetical protein F441_00443 [Phytophthora parasitica CJ01A1] >gi|570998824|gb|ETP54954.1| hypothetical protein F442_00438 [Phytophthora parasitica P10297] >gi|970650585|gb|KUF89586.1| hypothetical protein AM588_10002340 [Phytophthora nicotianae] >gi|970652946|gb|KUF91512.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora nicotianae]) HSP 1 Score: 93.5893 bits (231), Expect = 7.574e-18 Identity = 46/126 (36.51%), Postives = 78/126 (61.90%), Query Frame = 0
Query: 157 QRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEG 282
Q+VA++ EF R+ L L ++P T E + +L+AR++ D+ +++ E+AI+ ++ F L RF+ M+P++CVN+LLKY ELSL R RLT+HL +Y+KGF +Y ++ ++
Sbjct: 53 QKVAVNKEFYRRFLRLFKVIVPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAIERAIISRSQTDFMRHLRRFVAIMLPMSCVNSLLKYGHTELSLRFRTRLTKHLYEQYVKGFVYYKVSNLDN 178
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|780169442|ref|XP_011684247.1| (PREDICTED: ATP-binding cassette sub-family D member 3 isoform X3 [Strongylocentrotus purpuratus] >gi|780169447|ref|XP_011684248.1| PREDICTED: ATP-binding cassette sub-family D member 3 isoform X4 [Strongylocentrotus purpuratus]) HSP 1 Score: 93.5893 bits (231), Expect = 8.469e-18 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query: 158 RVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEG 282
R A+D +F R+L +L ++P W ++EA L + L+AR+ CD+ MI E +I+ + F+ L F+ M ++ VN +LKY EL L R +LT HL S+Y+KGFT+Y M+ ++
Sbjct: 60 RAAVDGQFFRRLFRILRIIVPGWFSKEAGYLALVALSLIARTYCDVWMIQNGTAIESSIIGRDVNLFKKHLFNFITAMPVISLVNNILKYGLNELKLRFRTQLTSHLYSRYLKGFTYYKMSNLDN 184
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|1050831054|gb|OCW30779.1| (ATP-binding cassette protein [Diaporthe helianthi]) HSP 1 Score: 93.5893 bits (231), Expect = 1.003e-17 Identity = 55/173 (31.79%), Postives = 87/173 (50.29%), Query Frame = 0
Query: 117 RTRSPNADALTRSGRDAAGHGERGSGGMRRPGGPPRPQEGQR----VALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEGHAR 285
R R+ A+ T S R+AA ER SG R G++ V LD EF R LL L+ ++P W+++E L F L+ R+ L++ + KA+V GN F + + ++ VP N++L + ELSL R RLT+H+ KY+ TFY ++ ++ +
Sbjct: 55 RVRNAIAEQKTASAREAAKRAER-SGTTGRVDTAEEDDGGKKKRRKVELDREFFRSLLRLMRIVVPGWRSKETRLLISHSFFLVVRTLISLKVAAMDGAIVKALVKGNGKEFLMRIVWWMLIAVPATFTNSMLSWHQAELSLKYRTRLTQHIHDKYLSKLTFYGISALDDRIK 226
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|390335880|ref|XP_788720.3| (PREDICTED: ATP-binding cassette sub-family D member 3 isoform X1 [Strongylocentrotus purpuratus] >gi|780169437|ref|XP_011684245.1| PREDICTED: ATP-binding cassette sub-family D member 3 isoform X2 [Strongylocentrotus purpuratus]) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-17 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query: 158 RVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEG 282
R A+D +F R+L +L ++P W ++EA L + L+AR+ CD+ MI E +I+ + F+ L F+ M ++ VN +LKY EL L R +LT HL S+Y+KGFT+Y M+ ++
Sbjct: 60 RAAVDGQFFRRLFRILRIIVPGWFSKEAGYLALVALSLIARTYCDVWMIQNGTAIESSIIGRDVNLFKKHLFNFITAMPVISLVNNILKYGLNELKLRFRTQLTSHLYSRYLKGFTYYKMSNLDN 184
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|301091276|ref|XP_002895826.1| (ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] >gi|262096576|gb|EEY54628.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 92.8189 bits (229), Expect = 1.478e-17 Identity = 46/126 (36.51%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 157 QRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEG 282
Q+VA++ EF R+ L L ++P T E + +L+AR++ D+ +++ E+AI+ ++ F L RF+ M+P++CVN+LLKY ELSL R RLT HL +Y+KGF +Y ++ ++
Sbjct: 53 QKVAVNREFYRRFLRLFKVIVPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAVERAIISRSQTDFMRHLRRFVAIMLPMSCVNSLLKYGHTELSLRFRTRLTRHLYEQYVKGFVYYKVSNLDN 178
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|1173960541|gb|OQS06657.1| (ATP-binding Cassette (ABC) Superfamily [Thraustotheca clavata]) HSP 1 Score: 92.0485 bits (227), Expect = 3.111e-17 Identity = 48/134 (35.82%), Postives = 80/134 (59.70%), Query Frame = 0
Query: 151 PRPQEGQ--RVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVMEG 282
P+ Q+GQ +VA++ EF + + L +IP T E A G+ LL R++ D+ ++ ++ E+AI+ + F + L+RF M+PV+CVN LLKY ELSL R RL+ L +KY+ +T+Y ++ ++
Sbjct: 780 PQKQKGQEKKVAINKEFLDRFIRLFKIIIPGVWTPEVAYAIGVAALLAMRTSFDITILRIITSIERAIIGRSSKDFMLHLSRFFLIMLPVSCVNCLLKYGHTELSLRFRSRLSTFLYTKYLHEYTYYKVSNLDA 913
BLAST of EWM23760.1 vs. NCBI_GenBank
Match: gi|1025683731|gb|OAA71029.1| (ABC transporter [Cordyceps confragosa RCEF 1005]) HSP 1 Score: 91.6633 bits (226), Expect = 3.692e-17 Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 0
Query: 117 RTRSPNADALTRSGRDAAGHGERGSGGMRRPG---GPPRPQEGQRVALDDEFGRQLLSLLHKLIPSWKTREAACLGGMVFLLLARSACDLRMINLVVGAEKAIVLGNRPAFRISLARFLRFMVPVACVNALLKYTTRELSLGLRQRLTEHLQSKYMKGFTFYSMAVME 281
R + A+ S R+A R + +PG GP P+ ++VALD EF R L+ L+ ++P W+++EA L F L+ R+ L++ + KA+V GN F +A ++ VP N++L Y ELSL R RLT+++ KY+ TFY ++ ++
Sbjct: 48 RIHNAIAEQKAASAREATQRASR-RATVSQPGDASGPDAPR--KKVALDREFFRSLMRLIRIVVPGWRSKEARLLISHSFFLVLRTLISLKVAEMDGAIVKALVRGNGKEFLTRIAWWMIIAVPATFTNSMLSYHQAELSLNYRTRLTQYIHDKYLSNLTFYGISALD 212 The following BLAST results are available for this feature:
BLAST of EWM23760.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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