rna6926, rna6926 (mRNA) Nannochloropsis gaditana

Overview
Namerna6926
Unique Namerna6926
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1057
Alignment locationCM002470.1:39041..39372 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101745g1.10234.mrna
Orig protein idgnl|cribi|Naga_101745g1.10234
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:39041..39372 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101745g1gene6692Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6926rna6926-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23762.1cds6910Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6926 ID=rna6926|Name=rna6926|organism=Nannochloropsis gaditana|type=mRNA|length=1057bp
TCACCCAACAAGGAAAAAGTGACTAGTAATGTCTCTCATCCCTGACTATC
TTACTTCTTCACCGCCTTTCTTAGATTTTTTTAAAAGAAAATAGCGGGAC
GTACAACTGCGAATGGATGGTTCTAGACGCATCCGCGCGCTCATTCAACG
TGCTGGACCAGGCACCAGGAAAAGTATCCATCACCGAGCATTCTCCCCTA
CTCTTCCAGCCTGAGCCCTCCCTCGCTCCTTCTTCCATCTCTTCTCACTC
ATTAATCGAGCAAAGCGAGAAAACGACTGAGATACCAGGAGCTTATTTTG
CCTCTTACAATGTGCCTTCCGACCGAGAGATATACGACTATTTGGGTTTC
GGATTAAAGGACCCGAGCAATATCAAGTACGCCGTGGAACGCTATACAGG
CTCTCCTCGCGAGCGCATGCTTAGTGAGGGGCAATTAGAGGTGACCTCTA
TGGCAGGCATGAAGCGCCTTATCCAATACAATGATTACATGCGCGATTCT
CGATCATTGGGCCATGCATATTTGGCAGTCGCGGGACGAGGTGACCTCGA
AATCTCATACGTTAATAGCCTCAAAAAAGAAAACGAGGGCAATTTTTCCT
TCGCCCAAATGAATGGCTCCCCCTTTGCGTCGTTAGAGGGAGCGATGGAT
GCGAAGGTTGTATCGGTCAACGAGGCTTTTTCCAGCCCCGAAAATCACCT
AAGCTTACATGCACGGGTGGGACCCACCTATGATCAGCAGCCAGCTTTTT
GCTGGAGTGATCATCCGGAGGAAGTCAATGCCTTTGAAAACGGCACGCAT
CCTGATTGTTTCCGCTTTGAGTGGGAACGCCTTTCCCCTGGAACCCTTCT
CGCTGATATGCTTGCTCGCAGCCAAACTAGAGCAGAGCAAAGAAAGTCTC
GAAATTCTCTTTTGCTGCGTGGAGGAGGAAAACGATTATATTGATCGTCA
ACTATTCAATCCGTATTTCAGCGCAGTAACTCAGTCAGCTTATCTGCATT
TGTAATAAATGAAAGCATTTTTTTAATGAAAGAAGACACAATTATGTATC
GCTTTTG
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protein sequence of rna6926

>rna6926-protein ID=rna6926-protein|Name=rna6926|organism=Nannochloropsis gaditana|type=polypeptide|length=94bp
MHGKRGNERGLRGKEGRAWEVEIVWTGRQGCVLPHREERTPPETLPHSAG
GKRADCDWGGVTSEILLSRYSEMTVTPPQIRPMSLAGHWKSRTV
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mRNA from alignment at CM002470.1:39041..39372+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6926 ID=rna6926|Name=rna6926|organism=Nannochloropsis gaditana|type=mRNA|length=332bp|location=Sequence derived from alignment at CM002470.1:39041..39372+ (Nannochloropsis gaditana)
ATGCATGGCAAGAGAGGGAATGTGAGGATTAGGGGCGGTACTCGCCAATA
GAAGAACCGCATGCGCAGGAGCGAGGCctgagagggaaagagggacgtGC
ATGGGAGGTAGAGATtgtgtggaccgggaggcaAGGTTGCGTGCTGCCGc
acagagaggaaagaacCCCCCCCGAAACTCTCCCTCAcagtgcaggagga
aaaagggcggaTTGTGATTGGGGTGGCGTCACGTCTGAgatcctcctttc
ccgttACAGTGAGATGACGGTGACCCCCCCCCAAATacggcccatgtcct
tgGCCGGGCACTGGAAGAGCCGCACGGTAtaa
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Coding sequence (CDS) from alignment at CM002470.1:39041..39372+

>rna6926 ID=rna6926|Name=rna6926|organism=Nannochloropsis gaditana|type=CDS|length=570bp|location=Sequence derived from alignment at CM002470.1:39041..39372+ (Nannochloropsis gaditana)
ATGCATGGCAAGAGAGGGAATGAGCGAGGCctgagagggaaagagggacg
tGCATGGGAGGTAGAGATtgtgtggaccgggaggcaAGGTTGCGTGCTGC
CGcacagagaggaaagaacCCCCCCCGAAACTCTCCCTCAcagtgcagga
ggaaaaagggcggaTTGTGATTGGGGTGGCGTCACGTCTGAgatcctcct
ttcccgttACAGTGAGATGACGGTGACCCCCCCCCAAATacggcccatgt
ccttgGCCGGGCACTGGAAGAGCCGCACGGTAtaaATGCATGGCAAGAGA
GGGAATGAGCGAGGCctgagagggaaagagggacgtGCATGGGAGGTAGA
GATtgtgtggaccgggaggcaAGGTTGCGTGCTGCCGcacagagaggaaa
gaacCCCCCCCGAAACTCTCCCTCAcagtgcaggaggaaaaagggcggaT
TGTGATTGGGGTGGCGTCACGTCTGAgatcctcctttcccgttACAGTGA
GATGACGGTGACCCCCCCCCAAATacggcccatgtccttgGCCGGGCACT
GGAAGAGCCGCACGGTAtaa
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Synonyms
Publications