EWM23762.1, cds6910 (CDS) Nannochloropsis gaditana

Overview
NameEWM23762.1
Unique Namecds6910
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:39041..39061 +
Alignment locationCM002470.1:39109..39372 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23762.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101745g1.10234.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:39041..39061 +
CM002470.1supercontigCM002470.1:39109..39372 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23762.1 vs. NCBI_GenBank
Match: gi|585104971|gb|EWM23762.1| (hypothetical protein Naga_101745g1 [Nannochloropsis gaditana])

HSP 1 Score: 191.815 bits (486), Expect = 7.496e-62
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 
Query:    1 MHGKRGNERGLRGKEGRAWEVEIVWTGRQGCVLPHREERTPPETLPHSAGGKRADCDWGGVTSEILLSRYSEMTVTPPQIRPMSLAGHWKSRTV 94
            MHGKRGNERGLRGKEGRAWEVEIVWTGRQGCVLPHREERTPPETLPHSAGGKRADCDWGGVTSEILLSRYSEMTVTPPQIRPMSLAGHWKSRTV
Sbjct:    1 MHGKRGNERGLRGKEGRAWEVEIVWTGRQGCVLPHREERTPPETLPHSAGGKRADCDWGGVTSEILLSRYSEMTVTPPQIRPMSLAGHWKSRTV 94
The following BLAST results are available for this feature:
BLAST of EWM23762.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104971|gb|EWM23762.1|7.496e-62100.00hypothetical protein Naga_101745g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6926rna6926Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications