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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100475g1.2339.mrna |
| Orig protein id | gnl|cribi|Naga_100475g1.2339 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:761894..763161 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6904 ID=rna6904|Name=rna6904|organism=Nannochloropsis gaditana|type=mRNA|length=729bp
TCGCCCCCCCGCACGTACACTGTCGTCTTTGCACCTTGACAGACATATTT
TCTCAGATGGCTCCCTCAATACCGATGGTGGTGGCGGCCACCCTACTCGT
CAGCGGGGCTTCCGCCTTCCTTGCTCCAGTTTCGACCCCTTCCTCCTCGA
GATTGTACGCGTCTGATGGCATGGCTTTGACCACGGAGACCCGACGGCCC
TCGAGCCTCGACCTCAGCCAGATGACGGTCCACGCGGGACGCGATGCCTT
GCTTCAGTTTCAAGACAAGCGCAAAACCAAGGGGGAAGCTTTCGACGCGG
TGCACGAGCCTGTGGAGTCCACCATGAAGCGCTTCAACAACCTCTACGGC
CGCCCCGTCATCCCCTTCTATCGCACCACGCTCTACGAGCTTGTCCAGGT
CAGTCTCTCCTCCTTTCCTGCTCTATCTCTTTCTCTCTCCCTCTCTCTCT
CTCTCTCTCTCTTTCTTTCTCCCTCTCTCTCTCTGGTCTCCCTCCCTCCG
CGCTTGCTCACTCCTAGACTTGACAGCACCTCGGCGAGCCGTTCCTACCT
TCCTCCCCCTTTCCATCCCTCTTTCCCTCCCTCTACCCTTTTTTTTCGCA
TGCCGTGTAACCTGCCTTACCGTCCTCGTCTCTTTCTATATTTTGACCTG
CGCGAACTACATGACGAGCGATCAACTCGGCACAGCCCGCTTATCACCTC
TCATCGCTTACCTTCCTCCCTCCCTCCCT back to topprotein sequence of rna6904 >rna6904-protein ID=rna6904-protein|Name=rna6904|organism=Nannochloropsis gaditana|type=polypeptide|length=146bp
MDSGKTQDDFVRAISSPNESDPVEKEIAAIAKASSFLPERYFSFGLCKTM
EALGVEVNWDSIKTWCEKLNMDESRTQLDWDLLERSMKKLGDLELLMKQV
EIREKKRLAERLEEKAKKTAEMAAVSLAATSSTSTPVEGKEPAMAN back to topmRNA from alignment at CM002469.1:761894..763161+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6904 ID=rna6904|Name=rna6904|organism=Nannochloropsis gaditana|type=mRNA|length=1268bp|location=Sequence derived from alignment at CM002469.1:761894..763161+ (Nannochloropsis gaditana)
ATGGACAGTGGGAAGACGCAGGATGACTtcgttcgcgccatttctaGCCC
CAACGAATGTAGGTGTGGGGATAGCTAcgggtggagaaagggatgcgCTA
CTTCGCACTCGATAAGGAAATGGTGCACAACGTCATGTGTCGGTTCCGAA
CGAGAGACCTTACCTACCTATCTACCTACCTATctacctacctacctacc
tccctacctccctccctgttcccctcccttctccacagcGGAcccggtgg
agaaggagatcgcggccatcgccaaggccagctccttcctccctgagcGT
TACTTCTCCTTCGGGCTCTGCAAGACGATGGAGGCGCTGGGTGTCGAGGT
GCGTGCAGAGTGAGCCATCGACACGCACCGCCCCACCAGTCGCTGATTGT
CGTCATCACGCGAggtttctctttcctccatcgcccttctcaccttcgtt
cccttcctccttcccgtcctcccttccttcctgcccctccctccttatcc
cctTCCCTACcgatccccctccttcaggttAACTGGGATTCGATCAAGAC
GTGGTGCGAGAAGTTGAATATGGACGAGTCGCGAACACAGCTGGACTGGG
ACCTGCTGGAGCGGtacgtcctcttctcctccctccctccctccctccct
cccgtcctccctccctctttctcttccttccttcctgcctttttgCGTAG
AAAGGTCCTTTGCTCTCTCATCTTGTGGTGACGGCGACCAAAGTTTTATT
CTATATCAGCCCACCCACTCCTACCTTTccgtccaccctccctccctctc
tccctctcttcctccctccctccccttctccctctctatccCTCAGATCG
ATGAAGAAGCTGGGTGACCTGGAACTGCTGATGAAGCAGGTGGAGATTCG
CGAGAAGAAGCGCCTGGCCGAGCgattggaggagaaggcgaagaaggtGG
GTATTCCCTTATCCCTCCTCGGTGGTCTTCTGGGcatccccctttctctt
ctcggTTCGCTTGTCTTCCTtacttccctttcttttggTCTCGATGAGGA
TCGACTTGACCCTTTGAACAGGATCCTTGCCGGTCGATTGTtcctcgacc
ctccccttctagcatgccctcctccttctctcaacGACTCACCTtctctc
cacccctccttcctttttcctcttttcctagACGGCTGAGATGGCCGCAG
TCTCACTGGCGGCGACCTCCTCGACGTCAACAcccgtggaggggaaggaa
ccTGCCATGGCCAATTAA back to topCoding sequence (CDS) from alignment at CM002469.1:761894..763161+ >rna6904 ID=rna6904|Name=rna6904|organism=Nannochloropsis gaditana|type=CDS|length=2205bp|location=Sequence derived from alignment at CM002469.1:761894..763161+ (Nannochloropsis gaditana)
ATGGACAGTGGGAAGACGCAGGATGACTtcgttcgcgccatttctaGCCC
CAACGAATcGGAcccggtggagaaggagatcgcggccatcgccaaggcca
gctccttcctccctgagcGTTACTTCTCCTTCGGGCTCTGCAAGACGATG
GAGGCGCTGGGTGTCGAGgttAACTGGGATTCGATCAAGACGTGGTGCGA
GAAGTTGAATATGGACGAGTCGCGAACACAGCTGGACTGGGACCTGCTGG
AGCGATCGATGAAGAAGCTGGGTGACCTGGAACTGCTGATGAAGCAGGTG
GAGATTCGCGAGAAGAAGCGCCTGGCCGAGCgattggaggagaaggcgaa
gaagACGGCTGAGATGGCCGCAGTCTCACTGGCGGCGACCTCCTCGACGT
CAACAcccgtggaggggaaggaaccTGCCATGGCCAATTAAATGGACAGT
GGGAAGACGCAGGATGACTtcgttcgcgccatttctaGCCCCAACGAATc
GGAcccggtggagaaggagatcgcggccatcgccaaggccagctccttcc
tccctgagcGTTACTTCTCCTTCGGGCTCTGCAAGACGATGGAGGCGCTG
GGTGTCGAGgttAACTGGGATTCGATCAAGACGTGGTGCGAGAAGTTGAA
TATGGACGAGTCGCGAACACAGCTGGACTGGGACCTGCTGGAGCGATCGA
TGAAGAAGCTGGGTGACCTGGAACTGCTGATGAAGCAGGTGGAGATTCGC
GAGAAGAAGCGCCTGGCCGAGCgattggaggagaaggcgaagaagACGGC
TGAGATGGCCGCAGTCTCACTGGCGGCGACCTCCTCGACGTCAACAcccg
tggaggggaaggaaccTGCCATGGCCAATTAAATGGACAGTGGGAAGACG
CAGGATGACTtcgttcgcgccatttctaGCCCCAACGAATcGGAcccggt
ggagaaggagatcgcggccatcgccaaggccagctccttcctccctgagc
GTTACTTCTCCTTCGGGCTCTGCAAGACGATGGAGGCGCTGGGTGTCGAG
gttAACTGGGATTCGATCAAGACGTGGTGCGAGAAGTTGAATATGGACGA
GTCGCGAACACAGCTGGACTGGGACCTGCTGGAGCGATCGATGAAGAAGC
TGGGTGACCTGGAACTGCTGATGAAGCAGGTGGAGATTCGCGAGAAGAAG
CGCCTGGCCGAGCgattggaggagaaggcgaagaagACGGCTGAGATGGC
CGCAGTCTCACTGGCGGCGACCTCCTCGACGTCAACAcccgtggagggga
aggaaccTGCCATGGCCAATTAAATGGACAGTGGGAAGACGCAGGATGAC
TtcgttcgcgccatttctaGCCCCAACGAATcGGAcccggtggagaagga
gatcgcggccatcgccaaggccagctccttcctccctgagcGTTACTTCT
CCTTCGGGCTCTGCAAGACGATGGAGGCGCTGGGTGTCGAGgttAACTGG
GATTCGATCAAGACGTGGTGCGAGAAGTTGAATATGGACGAGTCGCGAAC
ACAGCTGGACTGGGACCTGCTGGAGCGATCGATGAAGAAGCTGGGTGACC
TGGAACTGCTGATGAAGCAGGTGGAGATTCGCGAGAAGAAGCGCCTGGCC
GAGCgattggaggagaaggcgaagaagACGGCTGAGATGGCCGCAGTCTC
ACTGGCGGCGACCTCCTCGACGTCAACAcccgtggaggggaaggaaccTG
CCATGGCCAATTAAATGGACAGTGGGAAGACGCAGGATGACTtcgttcgc
gccatttctaGCCCCAACGAATcGGAcccggtggagaaggagatcgcggc
catcgccaaggccagctccttcctccctgagcGTTACTTCTCCTTCGGGC
TCTGCAAGACGATGGAGGCGCTGGGTGTCGAGgttAACTGGGATTCGATC
AAGACGTGGTGCGAGAAGTTGAATATGGACGAGTCGCGAACACAGCTGGA
CTGGGACCTGCTGGAGCGATCGATGAAGAAGCTGGGTGACCTGGAACTGC
TGATGAAGCAGGTGGAGATTCGCGAGAAGAAGCGCCTGGCCGAGCgattg
gaggagaaggcgaagaagACGGCTGAGATGGCCGCAGTCTCACTGGCGGC
GACCTCCTCGACGTCAACAcccgtggaggggaaggaaccTGCCATGGCCA
ATTAA back to top
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