rna6892, rna6892 (mRNA) Nannochloropsis gaditana

Overview
Namerna6892
Unique Namerna6892
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length781
Alignment locationCM002469.1:728708..729653 -

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Properties
Property NameValue
Productprotein kinase
Orig transcript idgnl|cribi|Naga_100861g2.10241.mrna
Orig protein idgnl|cribi|Naga_100861g2.10241
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:728708..729653 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100861g2gene6663Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6892rna6892-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23795.1cds6876Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6892 ID=rna6892|Name=rna6892|organism=Nannochloropsis gaditana|type=mRNA|length=781bp
GCCGTCGTCCTCCTCTTCCCCCTCCCCCCACCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCCCTCCCGCCTCCTCCACCA
CGGCGCTGCTCGAATCCTCCCTCCTCCCCGTGCTCGCCCTCCGCCCCCCC
GTCCCCTCCCTCCTCCTCCTCCTCAGCCAGCACCTCCCCTTCCTCCTCGC
CCACACCACGCGCCCCTTCTTCCTCTCCACCGTCCTCCCCCCCTGCCTCC
TCCTCCCCCTCGAAATCGACCTCCCCCCCCTCCAAGATCAGGCCCTCAAG
CACCTCGCCGATCCCCACATCCACGCCGTCCTTGGCCACGCCCGCATGCT
GGAGGAGGTTCTTCCCCGCCTCGGCCGCCTCCTGGTGCAGACTCCTCACG
TCTCCCTCCGCGTTAATGGCCTTGTTTGTCTCGCCAAGACTTTGCCCTGC
TACAGGAAGAAGGTGAGGTAGTCTTGACCCTCCTCTTGCGTGCCACGTAC
GTGTCGACGTGTACCCGAAGCGGACCAATTTTCATAAAGATTTTGGTTAC
TCGTGCCGTAAATTGCAACCCTTACGAGTCTCTGCACCCTCCTATCGCCG
CCTCCCTCCCCCTTGTCTTCCCCTGCATCTCCCTGCCCCTCCTTCCTCCC
CTCCCTCGACCAGGTCCTCTCCGAGGCCCTCCTACCCACACTCCGCGTCT
GTCTGGAGAAAGACCGAGCCCCTCCCGTCGTCATGGCGGCCGTCGCCTGC
TACGACCTCATTCTCAAAGAAGTGGGCGACG
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protein sequence of rna6892

>rna6892-protein ID=rna6892-protein|Name=rna6892|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLK
SLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERV
SFSLANALHRYQNLPAREQPLPKELVEFR
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mRNA from alignment at CM002469.1:728708..729653-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6892 ID=rna6892|Name=rna6892|organism=Nannochloropsis gaditana|type=mRNA|length=946bp|location=Sequence derived from alignment at CM002469.1:728708..729653- (Nannochloropsis gaditana)
TGAGACAGGTTTGTCCCGGGGCTGTGTTTTCATCCTTTGGTCGCACCTTT
CCTACCTCCTGCCCGGGCATTTCCACCGCCCCCGTGCTTACTCTGCTGCA
ACTTTATCCACTGAGCGCGCGGCCGCGGACATGGGAAACGAGCTCACCAA
AAAGTATGACAAAGAAAAAATTCACACGGCGTCTGGTGGACATGAATGCC
TCTGGAAGATCTATCGGGCGACTGTTAAAAGCACGGGGGAACCGGTAAGT
GCAGTGTTCCAGGCTGTAGTGAGGTTTCATGTTTTCCACGTCTCCTCCCT
TCAATTATGACCATTGTACAATAATTTTGGCTAATTTCTCTCGGACAGGC
CTCTGTTTTTGTTCTCGACCTGGATGACTTGAAAAGCCTTCCGAAAAACG
AACGGGAGCAGTTGCTGGACATATTTCGCAAGGTACATAGAGGGAGAAGG
GAGGCGGAAAGGGAAGGAAAAGGAGGTAGAAAAGGACATGGGAAACGATA
ATAAGAGTCGTGATGCCATCATGAGAGAGACGAGTACCAAGAGGAGGGAG
GAAGGTGCCATGAAGAGAGAGGAGAGTGCCGAGATGAGGGAGGAGTCGAA
GGGGGAACAAAATCGAGCTCCACATGTGGAGTGCAACCTCCGTAAGATCG
CGACCGAAGCCCTTTTCTCACCGTCGACCTCCCCTTTCCCCTCCCACCTT
GGCCCCTGCCACCCTCCCATGCCTTTCTCCCAGGATATACGTGCGCTCCG
CGAGCTAAACCATCCGTACATCCTGAAAATTTACGACGTGCTGGAGGAGA
ACAAGAAATGCTTGGCCTTCGTGGCAGAGAGGGTCTCCTTCTCGCTGGCC
AATGCTCTCCATCGGTATCAAAACCTGCCTGCCAGGGAACAACCGCTTCC
TAAAGAGTTGGTGGAATTCAGGTAGGCAGGGAGGAGGACTGCGACC
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Coding sequence (CDS) from alignment at CM002469.1:728708..729653-

>rna6892 ID=rna6892|Name=rna6892|organism=Nannochloropsis gaditana|type=CDS|length=1170bp|location=Sequence derived from alignment at CM002469.1:728708..729653- (Nannochloropsis gaditana)
GATATACGTGCGCTCCGCGAGCTAAACCATCCGTACATCCTGAAAATTTA
CGACGTGCTGGAGGAGAACAAGAAATGCTTGGCCTTCGTGGCAGAGAGGG
TCTCCTTCTCGCTGGCCAATGCTCTCCATCGGTATCAAAACCTGCCTGCC
AGGGAACAACCGCTTCCTAAAGAGTTGGTGGAATTCAGGTAGGCCTCTGT
TTTTGTTCTCGACCTGGATGACTTGAAAAGCCTTCCGAAAAACGAACGGG
AGCAGTTGCTGGACATATTTCGCAAGATGGGAAACGAGCTCACCAAAAAG
TATGACAAAGAAAAAATTCACACGGCGTCTGGTGGACATGAATGCCTCTG
GAAGATCTATCGGGCGACTGTTAAAAGCACGGGGGAACCGGATATACGTG
CGCTCCGCGAGCTAAACCATCCGTACATCCTGAAAATTTACGACGTGCTG
GAGGAGAACAAGAAATGCTTGGCCTTCGTGGCAGAGAGGGTCTCCTTCTC
GCTGGCCAATGCTCTCCATCGGTATCAAAACCTGCCTGCCAGGGAACAAC
CGCTTCCTAAAGAGTTGGTGGAATTCAGGTAGGCCTCTGTTTTTGTTCTC
GACCTGGATGACTTGAAAAGCCTTCCGAAAAACGAACGGGAGCAGTTGCT
GGACATATTTCGCAAGATGGGAAACGAGCTCACCAAAAAGTATGACAAAG
AAAAAATTCACACGGCGTCTGGTGGACATGAATGCCTCTGGAAGATCTAT
CGGGCGACTGTTAAAAGCACGGGGGAACCGGATATACGTGCGCTCCGCGA
GCTAAACCATCCGTACATCCTGAAAATTTACGACGTGCTGGAGGAGAACA
AGAAATGCTTGGCCTTCGTGGCAGAGAGGGTCTCCTTCTCGCTGGCCAAT
GCTCTCCATCGGTATCAAAACCTGCCTGCCAGGGAACAACCGCTTCCTAA
AGAGTTGGTGGAATTCAGGTAGGCCTCTGTTTTTGTTCTCGACCTGGATG
ACTTGAAAAGCCTTCCGAAAAACGAACGGGAGCAGTTGCTGGACATATTT
CGCAAGATGGGAAACGAGCTCACCAAAAAGTATGACAAAGAAAAAATTCA
CACGGCGTCTGGTGGACATGAATGCCTCTGGAAGATCTATCGGGCGACTG
TTAAAAGCACGGGGGAACCG
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Synonyms
Publications