EWM23795.1, cds6876 (CDS) Nannochloropsis gaditana

Overview
NameEWM23795.1
Unique Namecds6876
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:729410..729523 -
Alignment locationCM002469.1:729222..729305 -
Alignment locationCM002469.1:728729..728920 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23795.1
Productprotein kinase
Orig transcript idgnl|cribi|Naga_100861g2.10241.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:729410..729523 -
CM002469.1supercontigCM002469.1:729222..729305 -
CM002469.1supercontigCM002469.1:728729..728920 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|585105032|gb|EWM23795.1| (protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 266.159 bits (679), Expect = 2.677e-90
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNLPAREQPLPKELVEFR 129
            MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNLPAREQPLPKELVEFR
Sbjct:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNLPAREQPLPKELVEFR 129          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|553188877|ref|XP_005854886.1| (protein kinase, partial [Nannochloropsis gaditana CCMP526] >gi|422294176|gb|EKU21476.1| protein kinase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 140.969 bits (354), Expect = 8.440e-40
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRK 66
            MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRK
Sbjct:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRK 66          

HSP 2 Score: 132.109 bits (331), Expect = 2.633e-36
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0
Query:   64 FRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNLPAREQPLPKELVEF 128
            F +DIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNLPAREQPLPKELVEF
Sbjct:  140 FSQDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNLPAREQPLPKELVEF 204          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|673014936|ref|XP_008861429.1| (SCY1 protein kinase [Aphanomyces invadans] >gi|574483027|gb|ETW10018.1| SCY1 protein kinase [Aphanomyces invadans])

HSP 1 Score: 110.923 bits (276), Expect = 1.026e-25
Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E  K Y+  +  TASGGHE LWKIY A  + TG   SVFV D  DL  +   ER  +LD+ R+D++ LR L HP ILKI +V+EE +K L+FV ERV+ SLANA   + N+
Sbjct:   29 LGEEYEKGYEMPRDSTASGGHELLWKIYPALSRKTGAEVSVFVFDKKDLDKVQNKER--VLDVLRQDMKTLRVLRHPQILKIEEVIEETRKTLSFVTERVTCSLANACKNFANV 140          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|698778659|ref|XP_009822373.1| (SCY1 protein kinase [Aphanomyces astaci] >gi|574122034|gb|ETV87510.1| SCY1 protein kinase [Aphanomyces astaci])

HSP 1 Score: 109.383 bits (272), Expect = 3.315e-25
Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E  K Y+  +  TASGGHE LWKIY A  + TG   SVFV D  DL  +   +R  +LD+ R+D++ LR L HP ILKI +V EE +K L+FV ERV+ SLANA   + N+
Sbjct:   29 LGEEYEKGYEMPRDSTASGGHELLWKIYPAVSRKTGVEVSVFVFDKKDLDKVQNKDR--VLDVLRQDMKTLRVLRHPQILKIEEVFEETRKTLSFVTERVTCSLANACKNFANV 140          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|1173943778|gb|OQR92588.1| (protein kinase [Achlya hypogyna])

HSP 1 Score: 108.227 bits (269), Expect = 7.624e-25
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E  K Y+  +  TASGGHE LWKIY A  K TG   S+F+ D  +L  +  + +E++LD+ R D++ LR L HP ILKI +V EE++K L+FV ERV+ SLANA   + N+
Sbjct:   32 LGEEYEKNYEFPRDSTASGGHELLWKIYPAVSKKTGAEVSLFIFDKRELDKV--HNKERVLDVLRHDMKTLRLLRHPQILKIEEVFEESRKTLSFVTERVTCSLANACKNFTNV 143          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|669159104|ref|XP_008615114.1| (SCY1 protein kinase [Saprolegnia diclina VS20] >gi|530733031|gb|EQC31273.1| SCY1 protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 107.457 bits (267), Expect = 1.519e-24
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E  K Y+  +  TASGGHE LWKIY A  K TG   S+FV D  +L  +  + +E++LD+ R D++ LR L HP ILKI +V +E++K L+FV ERV+ SLANA   + N+
Sbjct:   32 LGEEYEKNYEFPRDSTASGGHELLWKIYPAVSKKTGAEVSLFVFDKRELDKV--HNKERVLDVLRHDMKTLRLLRHPQILKIEEVFDESRKTLSFVTERVTCSLANACKTFTNV 143          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|635362720|emb|CCI10403.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 107.071 bits (266), Expect = 1.955e-24
Identity = 54/118 (45.76%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDL---KSLPKNE-REQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E +K Y+  K  TASGGHE +WKI+ A  + T    S+FV D DDL     L K E +E+ LDI R +I+ LR L HP++LK+ +  EE+++ L+FV ERV+ SLANA   + N+
Sbjct:   21 IGEEFSKSYETPKDPTASGGHELVWKIFPAVSRKTNAEVSIFVFDKDDLVRKAGLKKKEDQERYLDILRSEIKTLRVLRHPHVLKVVEAFEESRRTLSFVTERVTCSLANACKNFNNV 138          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|1173960412|gb|OQS06542.1| (kinase [Thraustotheca clavata])

HSP 1 Score: 106.301 bits (264), Expect = 3.470e-24
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E  K Y+  +  TASGGHE LWKIY A  K TG   S+F+ D  +L  +  + +E++LD+ R D++ LR L HP ILK+ +V EE++K L+FV ERV+ SLANA   + N+
Sbjct:   32 LGEEYEKNYEFPRDSTASGGHELLWKIYPAVSKKTGAEVSLFIFDKRELDKV--HNKERILDVLRHDMKTLRVLRHPQILKMEEVFEESRKTLSFVTERVTCSLANACKNFTNV 143          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|325179541|emb|CCA13938.1| (protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 105.916 bits (263), Expect = 4.502e-24
Identity = 51/118 (43.22%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLP----KNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E +K Y+  K  TASGGHE +WKI+ A  + T    S+FV D DDL        K ++E+ LD+ R +I+ LR L HP++LK+ +  EE+++ L+FV ERV+ SLANA   + N+
Sbjct:   21 LGEEFSKSYETPKDPTASGGHELVWKIFPAVSRKTNAEVSIFVFDKDDLVKKAGLKRKEDQERYLDVLRSEIKTLRVLRHPHVLKVVEAFEESRRTLSFVTERVTCSLANACKNFNNV 138          
BLAST of EWM23795.1 vs. NCBI_GenBank
Match: gi|813118747|ref|XP_012196050.1| (SCY1 protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641539491|gb|KDO33300.1| SCY1 protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 104.76 bits (260), Expect = 1.413e-23
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 0
Query:    1 MGNELTKKYDKEKIHTASGGHECLWKIYRATVKSTGEPASVFVLDLDDLKSLPKNEREQLLDIFRKDIRALRELNHPYILKIYDVLEENKKCLAFVAERVSFSLANALHRYQNL 114
            +G E  K Y+  +  TASGGHE LWKIY A  K TG   S+FV D  +L  +  + +E++LD+ R D++ LR L HP ILKI +V +E++K L+FV ERV+ SL NA   + N+
Sbjct:   32 LGEEYEKNYEFPRDSTASGGHELLWKIYPAVSKKTGAEVSLFVFDKRELDKV--HNKERVLDVLRHDMKTLRLLRHPQILKIEEVFDESRKTLSFVTERVTCSLGNACKNFTNV 143          
The following BLAST results are available for this feature:
BLAST of EWM23795.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105032|gb|EWM23795.1|2.677e-90100.00protein kinase [Nannochloropsis gaditana][more]
gi|553188877|ref|XP_005854886.1|8.440e-40100.00protein kinase, partial [Nannochloropsis gaditana ... [more]
gi|673014936|ref|XP_008861429.1|1.026e-2550.00SCY1 protein kinase [Aphanomyces invadans] >gi|574... [more]
gi|698778659|ref|XP_009822373.1|3.315e-2549.12SCY1 protein kinase [Aphanomyces astaci] >gi|57412... [more]
gi|1173943778|gb|OQR92588.1|7.624e-2547.37protein kinase [Achlya hypogyna][more]
gi|669159104|ref|XP_008615114.1|1.519e-2447.37SCY1 protein kinase [Saprolegnia diclina VS20] >gi... [more]
gi|635362720|emb|CCI10403.1|1.955e-2445.76unnamed protein product [Albugo candida][more]
gi|1173960412|gb|OQS06542.1|3.470e-2446.49kinase [Thraustotheca clavata][more]
gi|325179541|emb|CCA13938.1|4.502e-2443.22protein kinase putative [Albugo laibachii Nc14][more]
gi|813118747|ref|XP_012196050.1|1.413e-2346.49SCY1 protein kinase [Saprolegnia parasitica CBS 22... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6892rna6892Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications