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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100276g3.9388.mrna |
| Orig protein id | gnl|cribi|Naga_100276g3.9388 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:164949..167450 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna688 ID=rna688|Name=rna688|organism=Nannochloropsis gaditana|type=mRNA|length=1308bp
GTTTGGTGGCAAAAGCTTAAGGGAATTATCTTCGGCATGAGATTTGGTCG
GGTATGCGTCTGCCCTCTCCTCACCCTCGTTGTACTTTGCCTTGTCTGTG
AGGGCAGCAGCACCAGGGCCATACACTGGGTGAAAACAGGCGCCCGTTCA
AAACAAGGCTTCCTTTTTCAATCCCGTGATCTGTTCCGGGGAGAAGAAGT
TGCCGGAAATAAAGAATCCCAGTCGCGGGCGGTGGCAGCTTGGGTCCGGA
AAAAAGAGAATGGTAATGATGACGGGGAAAAACCAAGGAAGCCGCAAAAA
GGCAAAAGCCGCAAGGCAAACAAGAATTCCCCCCGCCCCCCCGTCTTCAC
GGCCCGCATCGCGATCTTGGGCAGTCCAAGCGAAGAGTGGGGACAAGGCG
TGCGGGAACGTCTCATAAGCGAAGGTTGGATGGAGGAGCGCGTTCAAGTT
CTACCGATCCCCTCCCCGCAAGCATATCCAGAGGCGAAATGGATGGCATA
TCTACGGGAGGGACTCAAGTTGCGCAATACAACCTTCGTCATTGCCGCTC
CCGGCCCCGCCGTGGGTCAGGTCCTTCGCTTCCTGGAAAAGCACCCTCTG
AGGGGGAGCATACTGCTTGGACCTGAGGCCAGCTCTGACACCCGGTCGTG
GGACTACAAGAGGTTGCGGCAGCACTGCCCTTTCTTCGGTTTGATTTACG
CCATGGAGGGCGAAGAGGAAGAGTACGTGGGAGTAGGGCCAGGAGACAGG
GAGGGCGCGAGAGGTAGGGGTCGGCAAGGTTGGCTGTAAAAGTCGAATAG
GAAGGAGACTGCATGGGGTTGAGGAATACCCGCACGGCTGAGAGGAATGC
TGTAAAAAAGAGGTAGCAATGGCACGACTCTTTCCTAGCCGTGATATCTG
CGGGGGACTTGGCATGATTACCCATTTTCCGCTCATCGTGGCTTTGTCAT
CTCTTTCATCGCCGCCCCTCCCTCTGATCTCATTCTAGGTGGAGGCCATC
AGCGACTGCTGAGGAGGTTCGAGAGGGCCTTGGTCTCGCTCCTTACCCGT
TCGGCATTCGCGCTACTCCCCCAGGCCAGGAAATCAGAGCGATTCAGGCC
CTCATCCGTGATTGGCAGTTCTTAGAGTCGCTGGGTATGGGTCCGATCCA
GCTCGTCGGCGAGGACGAGGATGAGGAAAGGGAGAGGACAGGGCGAGATA
TCCCACCGATGGAGGAGGGGAACGCGTGATGGAGATTGACAAAGGACGTG
AAGGGATTAGAGAAATTACGTGTATAGACAAATATAAATAAAAGTGTTCA
AGCTTGAG back to topprotein sequence of rna688 >rna688-protein ID=rna688-protein|Name=rna688|organism=Nannochloropsis gaditana|type=polypeptide|length=211bp
MHAQKSGKSGHLVSLMGIGRESLKRLVVLSYRKKENGNDDGEKPRKPQKG
KSRKANKNSPRPPVFTARIAILGSPSEEWGQGVRERLISEGWMEERVQVL
PIPSPQAYPEAKWMAYLREGLKLRNTTFVIAAPGPAVGQVLRFLEKHPLR
GSILLGPEASSDTRSWDYKRLRQHCPFFGLIYAMEGEEEEYVGVGPGDRE
GARGRGRQGWL back to topmRNA from alignment at CM002456.1:164949..167450- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna688 ID=rna688|Name=rna688|organism=Nannochloropsis gaditana|type=mRNA|length=2502bp|location=Sequence derived from alignment at CM002456.1:164949..167450- (Nannochloropsis gaditana)
GTTTGGTGGCAAAAGCTTAAGGGAATTATCTTCGGCATGAGATTTGGTCG
GGTATGCGTCTGCCCTCTCCTCACCCTCGTTGTACTTTGCCTTGTCTGTG
AGGGCAGCAGCACCAGGGCCATACACTGGGTGAAAACAGGCGCCCGTTCA
AAACAAGGCTTCCTTTTTCAATCCCGTGATCTGTTCCGGGGAGAAGAAGT
TGCCGGAAATAAAGAATCCCAGTCGCGGGCGGTGGCAGCTTGGGTCCGGT
GGGTTAATGCATACGTACGCGTCTTGGGGGTGGGAGGAGGCTTTGATAAT
ACAATGCTCAAAGGGTAAATGCGAGCATGGTTTAGTTCTGTGTTTTAAAG
AGAGAACATGCATGCTCAGAAATCAGGGAAAAGTGGGCATCTTGTTTCAC
TGATGGGAATTGGTAGGGAGTCACTTAAGCGCTTAGTCGTCCTGTCTTAC
AGGAAAAAAGAGAATGGTAATGATGACGGGGAAAAACCAAGGAAGCCGCA
AAAAGGTGCGTGTAAGACCGGAAGGAGGACTGATAGGACGCACGACTGAG
TACGGACCTCTGAACTTCGCTCTGGTTCCAAACCATTCTGACCAGGCAAA
AGCCGCAAGGCAAACAAGAATTCCCCCCGCCCCCCCGTCTTCACGGCCCG
CATCGCGATCTTGGGCAGTCCAAGCGAAGAGTGGGGACAAGGCGTGCGGG
AACGTCTCATAAGCGAAGGTAACTAGGCCGCTACGGCTGGAGCGAATGCC
TTGAAAACCAGGGGGTCTATGGCTCCCATCTTGTCTTTTCGCCTGCCAAG
AATCCAACCGTTCCGTCCCCTGTGGACGTCTTTTCTTTTCCGGCTTGTCT
TAGGTTGGATGGAGGAGCGCGTTCAAGTTCTACCGATCCCCTCCCCGCAA
GCATATCCAGAGGCGAAATGGATGGCATATCTACGGTGGGTTTCTCTCTG
GCGTCTATCCTGAGAGTAAGGTCCGAAGATGGAGACAATCTATCCACAAG
CTCCATCCGCTTCAAACATGTGAAGAAGTCTATGTCAGTGTGGCCTTCCC
ACTCCTTCACGCATTCCAATCATTGATCCCAGCGAGGGTGCCGGCCGATC
CCCTTCCTATTCGTTGTCACCGGCCGATCCCCTTCCTATTCGTTGTCACC
GGCCGATCCCCTTCCTATTCGTTGTCACCGGCCGATCCCCTTCCTATTCG
TTGTCAGCCTCCACGCCTTGCGCGCGCCCGAACATCTTGTTTTCTTACTG
TCCGATATTAACTCATTTGCGAGCCATCCCCCCCCCCGCTCCCTTCCTTC
TTCTTGTTGAATGAGCAGGGAGGGACTCAAGTTGCGCAATACAACCTTCG
TCATTGCCGCTCCCGGCCCCGCCGTGGGTCAGGTCCTTCGCTTCCTGGAA
AAGCACCCTCTGAGGGGGAGCATACTGCTTGGTGGGTGCTAGAAGAGGGA
GGGTATATGGAATTGAGCGATGCAGTGGGAAGATGACCGAGTGAAGCTTA
GAGGAGGTTAGGCGTGCACCGTGGGTTTTCGCAGAAGAGGACATGGAGGA
AAGTCGCGGAGCCGTCGGCCGCGTATTGGAAAAAGGCCGGAGCTCATACA
TGTAGCCCTGACTTATTATTTTTTGTCGGTCTTTGCCTCTTTGGGGTGCC
TCCATCCTATTCCAGGACCTGAGGCCAGCTCTGACACCCGGTCGTGGGAC
TACAAGAGGTTGCGGCAGCACTGCCCTTTCTTCGGTTTGATTTACGCCAT
GGAGGGCGAAGAGGAAGAGTACGTGGGAGTAGGGCCAGGAGACAGGGAGG
GCGCGAGAGGTAGGGGTCGGCAAGGTTGGCTGTAAAAGTCGAATAGGAAG
GAGACTGCATGGGGTTGAGGAATACCCGCACGGCTGAGAGGAATGCTGTA
AAAAAGAGGTAGCAATGGCACGACTCTTTCCTAGCCGTGATATCTGCGGG
GGACTTGGCATGATTACCCATTTTCCGCTCATCGTGGCTTTGTCATCTCT
TTCATCGCCGCCCCTCCCTCTGATCTCATTCTAGGTGGAGGCCATCAGCG
ACTGCTGAGGAGGTTCGAGAGGGCCTTGGTCTCGCTCCTTACCCGTTCGG
CATTCGCGCTACTCCCCCAGGCCAGGAAATCAGGTAGTTATGTAGAAATG
GAAGGTTATCAAATGGCGGGCTGACGACTTTCCCCCACCACCTTTGTGTC
TCTTTGTGATTGCACGTCTACCCTCATGTCTGGTCTCTTGGGATGTCCTC
CGCCCTGACTCCTATTATTTAAATGTGACAGAGCGATTCAGGCCCTCATC
CGTGATTGGCAGTTCTTAGAGTCGCTGGGTATGGGTCCGATCCAGCTCGT
CGGCGAGGACGAGGATGAGGAAAGGGAGAGGACAGGGCGAGATATCCCAC
CGATGGAGGAGGGGAACGCGTGATGGAGATTGACAAAGGACGTGAAGGGA
TTAGAGAAATTACGTGTATAGACAAATATAAATAAAAGTGTTCAAGCTTG
AG back to topCoding sequence (CDS) from alignment at CM002456.1:164949..167450- >rna688 ID=rna688|Name=rna688|organism=Nannochloropsis gaditana|type=CDS|length=3180bp|location=Sequence derived from alignment at CM002456.1:164949..167450- (Nannochloropsis gaditana)
GACCTGAGGCCAGCTCTGACACCCGGTCGTGGGACTACAAGAGGTTGCGG
CAGCACTGCCCTTTCTTCGGTTTGATTTACGCCATGGAGGGCGAAGAGGA
AGAGTACGTGGGAGTAGGGCCAGGAGACAGGGAGGGCGCGAGAGGTAGGG
GTCGGCAAGGTTGGCTGTAAGGAGGGACTCAAGTTGCGCAATACAACCTT
CGTCATTGCCGCTCCCGGCCCCGCCGTGGGTCAGGTCCTTCGCTTCCTGG
AAAAGCACCCTCTGAGGGGGAGCATACTGCTTGGTTGGATGGAGGAGCGC
GTTCAAGTTCTACCGATCCCCTCCCCGCAAGCATATCCAGAGGCGAAATG
GATGGCATATCTACGGCAAAAGCCGCAAGGCAAACAAGAATTCCCCCCGC
CCCCCCGTCTTCACGGCCCGCATCGCGATCTTGGGCAGTCCAAGCGAAGA
GTGGGGACAAGGCGTGCGGGAACGTCTCATAAGCGAAGATGCATGCTCAG
AAATCAGGGAAAAGTGGGCATCTTGTTTCACTGATGGGAATTGGTAGGGA
GTCACTTAAGCGCTTAGTCGTCCTGTCTTACAGGAAAAAAGAGAATGGTA
ATGATGACGGGGAAAAACCAAGGAAGCCGCAAAAAGGACCTGAGGCCAGC
TCTGACACCCGGTCGTGGGACTACAAGAGGTTGCGGCAGCACTGCCCTTT
CTTCGGTTTGATTTACGCCATGGAGGGCGAAGAGGAAGAGTACGTGGGAG
TAGGGCCAGGAGACAGGGAGGGCGCGAGAGGTAGGGGTCGGCAAGGTTGG
CTGTAAGGAGGGACTCAAGTTGCGCAATACAACCTTCGTCATTGCCGCTC
CCGGCCCCGCCGTGGGTCAGGTCCTTCGCTTCCTGGAAAAGCACCCTCTG
AGGGGGAGCATACTGCTTGGTTGGATGGAGGAGCGCGTTCAAGTTCTACC
GATCCCCTCCCCGCAAGCATATCCAGAGGCGAAATGGATGGCATATCTAC
GGCAAAAGCCGCAAGGCAAACAAGAATTCCCCCCGCCCCCCCGTCTTCAC
GGCCCGCATCGCGATCTTGGGCAGTCCAAGCGAAGAGTGGGGACAAGGCG
TGCGGGAACGTCTCATAAGCGAAGATGCATGCTCAGAAATCAGGGAAAAG
TGGGCATCTTGTTTCACTGATGGGAATTGGTAGGGAGTCACTTAAGCGCT
TAGTCGTCCTGTCTTACAGGAAAAAAGAGAATGGTAATGATGACGGGGAA
AAACCAAGGAAGCCGCAAAAAGGACCTGAGGCCAGCTCTGACACCCGGTC
GTGGGACTACAAGAGGTTGCGGCAGCACTGCCCTTTCTTCGGTTTGATTT
ACGCCATGGAGGGCGAAGAGGAAGAGTACGTGGGAGTAGGGCCAGGAGAC
AGGGAGGGCGCGAGAGGTAGGGGTCGGCAAGGTTGGCTGTAAGGAGGGAC
TCAAGTTGCGCAATACAACCTTCGTCATTGCCGCTCCCGGCCCCGCCGTG
GGTCAGGTCCTTCGCTTCCTGGAAAAGCACCCTCTGAGGGGGAGCATACT
GCTTGGTTGGATGGAGGAGCGCGTTCAAGTTCTACCGATCCCCTCCCCGC
AAGCATATCCAGAGGCGAAATGGATGGCATATCTACGGCAAAAGCCGCAA
GGCAAACAAGAATTCCCCCCGCCCCCCCGTCTTCACGGCCCGCATCGCGA
TCTTGGGCAGTCCAAGCGAAGAGTGGGGACAAGGCGTGCGGGAACGTCTC
ATAAGCGAAGATGCATGCTCAGAAATCAGGGAAAAGTGGGCATCTTGTTT
CACTGATGGGAATTGGTAGGGAGTCACTTAAGCGCTTAGTCGTCCTGTCT
TACAGGAAAAAAGAGAATGGTAATGATGACGGGGAAAAACCAAGGAAGCC
GCAAAAAGGACCTGAGGCCAGCTCTGACACCCGGTCGTGGGACTACAAGA
GGTTGCGGCAGCACTGCCCTTTCTTCGGTTTGATTTACGCCATGGAGGGC
GAAGAGGAAGAGTACGTGGGAGTAGGGCCAGGAGACAGGGAGGGCGCGAG
AGGTAGGGGTCGGCAAGGTTGGCTGTAAGGAGGGACTCAAGTTGCGCAAT
ACAACCTTCGTCATTGCCGCTCCCGGCCCCGCCGTGGGTCAGGTCCTTCG
CTTCCTGGAAAAGCACCCTCTGAGGGGGAGCATACTGCTTGGTTGGATGG
AGGAGCGCGTTCAAGTTCTACCGATCCCCTCCCCGCAAGCATATCCAGAG
GCGAAATGGATGGCATATCTACGGCAAAAGCCGCAAGGCAAACAAGAATT
CCCCCCGCCCCCCCGTCTTCACGGCCCGCATCGCGATCTTGGGCAGTCCA
AGCGAAGAGTGGGGACAAGGCGTGCGGGAACGTCTCATAAGCGAAGATGC
ATGCTCAGAAATCAGGGAAAAGTGGGCATCTTGTTTCACTGATGGGAATT
GGTAGGGAGTCACTTAAGCGCTTAGTCGTCCTGTCTTACAGGAAAAAAGA
GAATGGTAATGATGACGGGGAAAAACCAAGGAAGCCGCAAAAAGGACCTG
AGGCCAGCTCTGACACCCGGTCGTGGGACTACAAGAGGTTGCGGCAGCAC
TGCCCTTTCTTCGGTTTGATTTACGCCATGGAGGGCGAAGAGGAAGAGTA
CGTGGGAGTAGGGCCAGGAGACAGGGAGGGCGCGAGAGGTAGGGGTCGGC
AAGGTTGGCTGTAAGGAGGGACTCAAGTTGCGCAATACAACCTTCGTCAT
TGCCGCTCCCGGCCCCGCCGTGGGTCAGGTCCTTCGCTTCCTGGAAAAGC
ACCCTCTGAGGGGGAGCATACTGCTTGGTTGGATGGAGGAGCGCGTTCAA
GTTCTACCGATCCCCTCCCCGCAAGCATATCCAGAGGCGAAATGGATGGC
ATATCTACGGCAAAAGCCGCAAGGCAAACAAGAATTCCCCCCGCCCCCCC
GTCTTCACGGCCCGCATCGCGATCTTGGGCAGTCCAAGCGAAGAGTGGGG
ACAAGGCGTGCGGGAACGTCTCATAAGCGAAGATGCATGCTCAGAAATCA
GGGAAAAGTGGGCATCTTGTTTCACTGATGGGAATTGGTAGGGAGTCACT
TAAGCGCTTAGTCGTCCTGTCTTACAGGAAAAAAGAGAATGGTAATGATG
ACGGGGAAAAACCAAGGAAGCCGCAAAAAG back to top
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