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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100886g2.9407.mrna |
| Orig protein id | gnl|cribi|Naga_100886g2.9407 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:706533..706983 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6879 ID=rna6879|Name=rna6879|organism=Nannochloropsis gaditana|type=mRNA|length=1183bp
TTGTTTTGTAGGGATTCATGATGCGAAATCAAAGGTATGAAATATATCGG
TTTCGAACGATTTGCCGAAAAAGCGAGATCAATTTCGCAAAACGTTATTT
TCGGCGCACGAGGAATGTCACGTCCAAGATTTGTTCTTTCTCTTCTTCCC
TCCCTAAATGCACGTTGACCGCAACTACAAGACAGACTTCGATCTTTACT
ACAAGATGAATGGTGACAGAATTAAAACTAATGCTGGTAATAGCGACTGG
CAAAAGGAGCAGGAGGAAGAGGTAGCTACTGCCCATACTCATCCCTTGGA
GCAGATGCATACTCAAGACGTTGAAGAAATCGAGGAAGACGACGGGTTTG
AAGACCTTGGGAGGAGGGATGACGAAGTTAAGCGACGCGGCAACAGTGTC
GATGATGAGAACCTGAAGCTAGCAGGTCTTGCAGGGAAAGAACCGCGTCT
ACGCAAAAGTCGTGAGGGAAAGCCACGTGGCCCCCCTAACAGAGGAGCCC
CCTCCCCTCTCCCCTCCACCTCGTCCTCTATCTGTGCAAACCCTCCTTCG
AAAGGGGCGACCCGCACAACGACGCATGCCCCCTTGGGAACAAAGGATCC
CCTACTCCATACACTTCTAGACGATCCGGAAGCATCCAGCTCGAATCCTC
CGCAGAGCCGGGATGATATTGCTGACTTCCATCACGCATCCTCCCACTCC
TCCTCTACCAGCTTCTTGAAAAAACGCCGGAAGCAATTCGAGATCCCTCC
GCACCAAGTCCCCGGACAAGCCTACCACGCTACCATTCAGAAGCTGAAGG
CTTTGTACCGAGGGAAAGTGTTGGAGTTGGAGGAAAAGTACCTCTTTCAT
CGCTTCGGTTTCGAAGAACTCACACAGCAGCAGCTGGAGGCAAAGGCCCA
GGTCCTTCTTCTGGGCCAGTACAGCACGGGAAAGACGACCATGATCCGGT
ATTTGCTCGGACGCGAGTATCTCGGTCTACACGTGGGGCCCGAGCCTACC
ACTGACAGATACGTGGCCATCGTCCACGGCGATGTAGACGACGTCATCAG
CGGGAAGGTCTTGACCGAGAACCCGGCGCTGCCCTTCAAGGAAACGGAAC
GCTTCGCGGGTCTAGGCGGGAAATTCCAGGCCAGCCGGTGTCCTGCGCCC
ATTCTTGAGAGCCTCACCCTTATCGACACTCCC back to topprotein sequence of rna6879 >rna6879-protein ID=rna6879-protein|Name=rna6879|organism=Nannochloropsis gaditana|type=polypeptide|length=94bp
MDSTSLNVVPMVVDDKEGNDEDLQFSATSSLAPTTLLRDQALGLISDAQT
AERKDKEVLLKQVQELVLYRDPTLLDEVVPLLISEFQVRCGGKE back to topmRNA from alignment at CM002469.1:706533..706983+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6879 ID=rna6879|Name=rna6879|organism=Nannochloropsis gaditana|type=mRNA|length=451bp|location=Sequence derived from alignment at CM002469.1:706533..706983+ (Nannochloropsis gaditana)
ACAGGCACCCTTAGCAGATGGATAGTACAAGTCTGAATGTTGTGCCGATG
GTCGTGGACGACAAGGAAGGCAATGACGAGGATCTGCAGTTCTccgctac
ctcctcccttgccccaaCCACCCTTCTTCGCGATCAGGCCTTAGGGCTTA
TAAGTGATGCACAGACGGCAGAACGAAAAGACAAAGAAGTACTGCTGAAA
CAGGTGAGGATTAAAAATCTGTCTTGTTGTCATACGTGTTGCGAGGTTAA
CATGCAGTCATGTAAACATCGtgctcgaggaggcaggcatcCGATGCTTC
CTGTTCCTCGAGTCGCTTTATCCTTCATTTGACCCATGATGATTCTCAAC
AGGTGCAAGAATTAGTTCTTTACCGGGACCCCACGTTACTGGACGAAGTG
GTGCCGCTATTAATCAGCGAGTTTCAGGTACGttgtggagggaaggagtg
a back to topCoding sequence (CDS) from alignment at CM002469.1:706533..706983+ >rna6879 ID=rna6879|Name=rna6879|organism=Nannochloropsis gaditana|type=CDS|length=570bp|location=Sequence derived from alignment at CM002469.1:706533..706983+ (Nannochloropsis gaditana)
ATGGATAGTACAAGTCTGAATGTTGTGCCGATGGTCGTGGACGACAAGGA
AGGCAATGACGAGGATCTGCAGTTCTccgctacctcctcccttgccccaa
CCACCCTTCTTCGCGATCAGGCCTTAGGGCTTATAAGTGATGCACAGACG
GCAGAACGAAAAGACAAAGAAGTACTGCTGAAACAGGTGCAAGAATTAGT
TCTTTACCGGGACCCCACGTTACTGGACGAAGTGGTGCCGCTATTAATCA
GCGAGTTTCAGGTACGttgtggagggaaggagtgaATGGATAGTACAAGT
CTGAATGTTGTGCCGATGGTCGTGGACGACAAGGAAGGCAATGACGAGGA
TCTGCAGTTCTccgctacctcctcccttgccccaaCCACCCTTCTTCGCG
ATCAGGCCTTAGGGCTTATAAGTGATGCACAGACGGCAGAACGAAAAGAC
AAAGAAGTACTGCTGAAACAGGTGCAAGAATTAGTTCTTTACCGGGACCC
CACGTTACTGGACGAAGTGGTGCCGCTATTAATCAGCGAGTTTCAGGTAC
Gttgtggagggaaggagtga back to top
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