EWM23810.1, cds6863 (CDS) Nannochloropsis gaditana

Overview
NameEWM23810.1
Unique Namecds6863
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:706550..706735 +
Alignment locationCM002469.1:706885..706983 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23810.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100886g2.9407.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:706550..706735 +
CM002469.1supercontigCM002469.1:706885..706983 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23810.1 vs. NCBI_GenBank
Match: gi|585105057|gb|EWM23810.1| (hypothetical protein Naga_100886g2 [Nannochloropsis gaditana])

HSP 1 Score: 187.193 bits (474), Expect = 4.406e-60
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 
Query:    1 MDSTSLNVVPMVVDDKEGNDEDLQFSATSSLAPTTLLRDQALGLISDAQTAERKDKEVLLKQVQELVLYRDPTLLDEVVPLLISEFQVRCGGKE 94
            MDSTSLNVVPMVVDDKEGNDEDLQFSATSSLAPTTLLRDQALGLISDAQTAERKDKEVLLKQVQELVLYRDPTLLDEVVPLLISEFQVRCGGKE
Sbjct:    1 MDSTSLNVVPMVVDDKEGNDEDLQFSATSSLAPTTLLRDQALGLISDAQTAERKDKEVLLKQVQELVLYRDPTLLDEVVPLLISEFQVRCGGKE 94
The following BLAST results are available for this feature:
BLAST of EWM23810.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105057|gb|EWM23810.1|4.406e-60100.00hypothetical protein Naga_100886g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6879rna6879Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications