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Properties
| Property Name | Value |
|---|
| Product | endocytosis signaling protein |
| Orig transcript id | gnl|cribi|Naga_100886g1.9408.mrna |
| Orig protein id | gnl|cribi|Naga_100886g1.9408 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:702897..704717 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6878 ID=rna6878|Name=rna6878|organism=Nannochloropsis gaditana|type=mRNA|length=817bp
GCCCAGGTCCTCTTGAACCAGCGAAAAAAACTCGCCCACAAGGACGTGCC
CCCCCTCGCCACCATTAAGGCCCACCTCCTCTCCTCTTTTCCTTCCCTGA
ACGACCTTCCTTGCCCTTCCCCTGCCGATCTGACCCGCGTGGATGTCATT
CTGGACAAGGACATCCCGGAGCTGATCGCCGAAGTCGACGGGGCTTTCTC
CCTTCCCGCCCCTCCCTCCCTTCCACCCTCCCGTCCTCCCGTCTCTAAGC
TCGGGGCCCTGTTTTCATCTCCCTTTCGTGGTGCGGGGAATGTTCGGGAA
AAAGGAAAAAAGTCTTCGGGAGGGCTGTGCTTGAAAGGCGCCCTCGTGAT
GGCGCTCTTGCTCGTGCTTGTGATCGTTACTGTGGAGTTGGTCTGGATGC
TGTGGGAGGAAGGAGGAGAGAGGTGGAAGTACGCATGGGCGACAGTGATG
GAGGAGTGGGTGGGAGGCAAGCGCCAGGAATTGTAACGGCTTTCTCCTCT
CAAAGGGGTGGGGAAATATCCCAAGTCCAGGAGGAGGAAGGAAGTGTCTT
TGAGGAGCACGACTATGTGTCCGAGGGGCTTGATTCGATGGAGTCCGAGA
GAACTGATGCAAATTGGTGTTAAGCAGGTGGGAAAAGTATTGTAAAAGAT
TCTCTTCCATAAGCAGCACTTCTGCAAGAGCCGTAGCTTCAGGGAAAGCA
GAGGCGCGAATCGGCAAACATATCTATATGCTTTTGTGAACAAAACAGTG
GCATAAAATGGAAAAAAGTAATCTATTTACCATAGAGCATCAAAAGAAAC
AGAGAAGTATCCATAGG back to topprotein sequence of rna6878 >rna6878-protein ID=rna6878-protein|Name=rna6878|organism=Nannochloropsis gaditana|type=polypeptide|length=342bp
MHVDRNYKTDFDLYYKMNGDRIKTNAGNSDWQKEQEEEVATAHTHPLEQM
HTQDVEEIEEDDGFEDLGRRDDEVKRRGNSVDDENLKLAGLAGKEPRLRK
SREGKPRGPPNRGAPSPLPSTSSSICANPPSKGATRTTTHAPLGTKDPLL
HTLLDDPEASSSNPPQSRDDIADFHHASSHSSSTSFLKKRRKQFEIPPHQ
VPGQAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVL
LLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGK
VLTENPALPFKETERFAGLGGKFQASRCPAPILESLTLIDTP back to topmRNA from alignment at CM002469.1:702897..704717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6878 ID=rna6878|Name=rna6878|organism=Nannochloropsis gaditana|type=mRNA|length=1821bp|location=Sequence derived from alignment at CM002469.1:702897..704717- (Nannochloropsis gaditana)
TTGTTTTGTAGGGATTCATGATGCGAAATCAAAGGTATGAAATATATCGG
TTTCGAACGATTTGCCGAAAAAGCGAGATCAATTTCGCAAAACGTTATTT
TCGGCGCACGAGGAATGTCACGTCCAAGATTTGTTCTTTCTCTTCTTCCC
TCCCTAAATGCACGTTGACCGCAACTACAAGACAGACTTCGATCTTTACT
ACAAGATGAATGGTGACAGAATTAAAACTAATGCTGGTAATAGCGACTGG
CAAAAGGAGCAGGAGGAAGAGGTAGCTACTGCCCATACTCATCCCTTGGT
AGGTCCAGATGGACTCGCAAACATAGGGAAAGGAGTAAGGACTGCCGTAA
TTTTCAATCAATATAAAGCTTTGCGAGGTATTCTCATGGTTTATTTTGTA
CATGTGCATTTTCCCACACGACAAAAAGGAGCAGATGCATACTCAAGACG
TTGAAGAAATCGAGGAAGACGACGGGTTTGAAGACCTTGGGAGGAGGGAT
GACGAAGTTAAGCGACGCGGCAACAGTGTCGATGATGAGAACCTGAAGCT
AGCAGGTCTTGCAGGGGTGAGCAAAGAACTGATCCGCACGTTGCATGGGA
GGAAGCAGAGCGAAAACGAAATGCCGAGATAACGTACATGTCTTTTTCAA
GTCCTGATCTTTCCCTCCGCAGCTTCAATAAATTATTTAGTACATAATTT
CGCCTATACTCCTTTTCCACACACGTATACATATAAGCAGAAAGAACCGC
GTCTACGCAAAAGTCGTGAGGGAAAGCCACGTGGCCCCCCTAACAGAGGA
GCCCCCTCCCCTCTCCCCTCCACCTCGTCCTCTATCTGTGCAAACCCTCC
TTCGAAAGGGGCGACCCGCACAACGACGCATGCCCCCTTGGGAACAAAGG
ATCCCCTACTCCATACACTTCTAGACGATCCGGAAGCATCCAGCTCGAAT
CCTCCGCAGAGCCGGGATGATATTGCTGACTTCCATCACGCATCCTCCCA
CTCCTCCTCTACCAGCTTCTTGAAAAAACGCCGGAAGCAATTCGAGATCC
CTCCGCACCAAGTCCCCGGACAAGCCTACCACGCTACCATTCAGAAGCTG
AAGGCTTTGTACCGAGGGAAAGTGTTGGAGTTGGAGGAAAAGTACCTCTT
TCATCGCTTCGGTTTCGAAGAACTCACACAGCAGCAGCTGGAGGCAAAGG
CCCAGGTAATTGGAAATCATTTTAGTATAAATATACATTTTAAAAACGCA
CTTTTAAAGCAGTGACGATGCGCTCCCTCTCCCTCTCCCGTCTCCACGCA
CCTACCCTCCTTCCCTCCCTCCTTCCCTCCCTCAGGTCCTTCTTCTGGGC
CAGTACAGCACGGGAAAGACGACCATGATCCGGTATTTGCTCGGACGCGA
GTATCTCGGTCTACACGTGGGGCCCGAGCCTACCACTGACAGGTCAGCCC
TTCCCTCCCTCCCTCCCTCCGTTGCTCTCTTTCTCCCTCCTTCTCTCTCT
CCCTCCCTCCTTCCCTCTCTTTAGAGGGCGTCGTAATACATCGTTTTGGG
CATCCCCTTTTCCGTCCCTGCCTCCGTCAATCCCAAATATCCCTCCCCCA
CCCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCAGATAC
GTGGCCATCGTCCACGGCGATGTAGACGACGTCATCAGCGGGAAGGTCTT
GACCGAGAACCCGGCGCTGCCCTTCAAGGAAACGGAACGCTTCGCGGGTC
TAGGCGGGAAATTCCAGGCCAGCCGGTGTCCTGCGCCCATTCTTGAGAGC
CTCACCCTTATCGACACTCCC back to topCoding sequence (CDS) from alignment at CM002469.1:702897..704717- >rna6878 ID=rna6878|Name=rna6878|organism=Nannochloropsis gaditana|type=CDS|length=5130bp|location=Sequence derived from alignment at CM002469.1:702897..704717- (Nannochloropsis gaditana)
ATACGTGGCCATCGTCCACGGCGATGTAGACGACGTCATCAGCGGGAAGG
TCTTGACCGAGAACCCGGCGCTGCCCTTCAAGGAAACGGAACGCTTCGCG
GGTCTAGGCGGGAAATTCCAGGCCAGCCGGTGTCCTGCGCCCATTCTTGA
GAGCCTCACCCTTATCGACACTCCCGTCCTTCTTCTGGGCCAGTACAGCA
CGGGAAAGACGACCATGATCCGGTATTTGCTCGGACGCGAGTATCTCGGT
CTACACGTGGGGCCCGAGCCTACCACTGACAGAAAGAACCGCGTCTACGC
AAAAGTCGTGAGGGAAAGCCACGTGGCCCCCCTAACAGAGGAGCCCCCTC
CCCTCTCCCCTCCACCTCGTCCTCTATCTGTGCAAACCCTCCTTCGAAAG
GGGCGACCCGCACAACGACGCATGCCCCCTTGGGAACAAAGGATCCCCTA
CTCCATACACTTCTAGACGATCCGGAAGCATCCAGCTCGAATCCTCCGCA
GAGCCGGGATGATATTGCTGACTTCCATCACGCATCCTCCCACTCCTCCT
CTACCAGCTTCTTGAAAAAACGCCGGAAGCAATTCGAGATCCCTCCGCAC
CAAGTCCCCGGACAAGCCTACCACGCTACCATTCAGAAGCTGAAGGCTTT
GTACCGAGGGAAAGTGTTGGAGTTGGAGGAAAAGTACCTCTTTCATCGCT
TCGGTTTCGAAGAACTCACACAGCAGCAGCTGGAGGCAAAGGCCCAGGAG
CAGATGCATACTCAAGACGTTGAAGAAATCGAGGAAGACGACGGGTTTGA
AGACCTTGGGAGGAGGGATGACGAAGTTAAGCGACGCGGCAACAGTGTCG
ATGATGAGAACCTGAAGCTAGCAGGTCTTGCAGGGATGCACGTTGACCGC
AACTACAAGACAGACTTCGATCTTTACTACAAGATGAATGGTGACAGAAT
TAAAACTAATGCTGGTAATAGCGACTGGCAAAAGGAGCAGGAGGAAGAGG
TAGCTACTGCCCATACTCATCCCTTGATACGTGGCCATCGTCCACGGCGA
TGTAGACGACGTCATCAGCGGGAAGGTCTTGACCGAGAACCCGGCGCTGC
CCTTCAAGGAAACGGAACGCTTCGCGGGTCTAGGCGGGAAATTCCAGGCC
AGCCGGTGTCCTGCGCCCATTCTTGAGAGCCTCACCCTTATCGACACTCC
CGTCCTTCTTCTGGGCCAGTACAGCACGGGAAAGACGACCATGATCCGGT
ATTTGCTCGGACGCGAGTATCTCGGTCTACACGTGGGGCCCGAGCCTACC
ACTGACAGAAAGAACCGCGTCTACGCAAAAGTCGTGAGGGAAAGCCACGT
GGCCCCCCTAACAGAGGAGCCCCCTCCCCTCTCCCCTCCACCTCGTCCTC
TATCTGTGCAAACCCTCCTTCGAAAGGGGCGACCCGCACAACGACGCATG
CCCCCTTGGGAACAAAGGATCCCCTACTCCATACACTTCTAGACGATCCG
GAAGCATCCAGCTCGAATCCTCCGCAGAGCCGGGATGATATTGCTGACTT
CCATCACGCATCCTCCCACTCCTCCTCTACCAGCTTCTTGAAAAAACGCC
GGAAGCAATTCGAGATCCCTCCGCACCAAGTCCCCGGACAAGCCTACCAC
GCTACCATTCAGAAGCTGAAGGCTTTGTACCGAGGGAAAGTGTTGGAGTT
GGAGGAAAAGTACCTCTTTCATCGCTTCGGTTTCGAAGAACTCACACAGC
AGCAGCTGGAGGCAAAGGCCCAGGAGCAGATGCATACTCAAGACGTTGAA
GAAATCGAGGAAGACGACGGGTTTGAAGACCTTGGGAGGAGGGATGACGA
AGTTAAGCGACGCGGCAACAGTGTCGATGATGAGAACCTGAAGCTAGCAG
GTCTTGCAGGGATGCACGTTGACCGCAACTACAAGACAGACTTCGATCTT
TACTACAAGATGAATGGTGACAGAATTAAAACTAATGCTGGTAATAGCGA
CTGGCAAAAGGAGCAGGAGGAAGAGGTAGCTACTGCCCATACTCATCCCT
TGATACGTGGCCATCGTCCACGGCGATGTAGACGACGTCATCAGCGGGAA
GGTCTTGACCGAGAACCCGGCGCTGCCCTTCAAGGAAACGGAACGCTTCG
CGGGTCTAGGCGGGAAATTCCAGGCCAGCCGGTGTCCTGCGCCCATTCTT
GAGAGCCTCACCCTTATCGACACTCCCGTCCTTCTTCTGGGCCAGTACAG
CACGGGAAAGACGACCATGATCCGGTATTTGCTCGGACGCGAGTATCTCG
GTCTACACGTGGGGCCCGAGCCTACCACTGACAGAAAGAACCGCGTCTAC
GCAAAAGTCGTGAGGGAAAGCCACGTGGCCCCCCTAACAGAGGAGCCCCC
TCCCCTCTCCCCTCCACCTCGTCCTCTATCTGTGCAAACCCTCCTTCGAA
AGGGGCGACCCGCACAACGACGCATGCCCCCTTGGGAACAAAGGATCCCC
TACTCCATACACTTCTAGACGATCCGGAAGCATCCAGCTCGAATCCTCCG
CAGAGCCGGGATGATATTGCTGACTTCCATCACGCATCCTCCCACTCCTC
CTCTACCAGCTTCTTGAAAAAACGCCGGAAGCAATTCGAGATCCCTCCGC
ACCAAGTCCCCGGACAAGCCTACCACGCTACCATTCAGAAGCTGAAGGCT
TTGTACCGAGGGAAAGTGTTGGAGTTGGAGGAAAAGTACCTCTTTCATCG
CTTCGGTTTCGAAGAACTCACACAGCAGCAGCTGGAGGCAAAGGCCCAGG
AGCAGATGCATACTCAAGACGTTGAAGAAATCGAGGAAGACGACGGGTTT
GAAGACCTTGGGAGGAGGGATGACGAAGTTAAGCGACGCGGCAACAGTGT
CGATGATGAGAACCTGAAGCTAGCAGGTCTTGCAGGGATGCACGTTGACC
GCAACTACAAGACAGACTTCGATCTTTACTACAAGATGAATGGTGACAGA
ATTAAAACTAATGCTGGTAATAGCGACTGGCAAAAGGAGCAGGAGGAAGA
GGTAGCTACTGCCCATACTCATCCCTTGATACGTGGCCATCGTCCACGGC
GATGTAGACGACGTCATCAGCGGGAAGGTCTTGACCGAGAACCCGGCGCT
GCCCTTCAAGGAAACGGAACGCTTCGCGGGTCTAGGCGGGAAATTCCAGG
CCAGCCGGTGTCCTGCGCCCATTCTTGAGAGCCTCACCCTTATCGACACT
CCCGTCCTTCTTCTGGGCCAGTACAGCACGGGAAAGACGACCATGATCCG
GTATTTGCTCGGACGCGAGTATCTCGGTCTACACGTGGGGCCCGAGCCTA
CCACTGACAGAAAGAACCGCGTCTACGCAAAAGTCGTGAGGGAAAGCCAC
GTGGCCCCCCTAACAGAGGAGCCCCCTCCCCTCTCCCCTCCACCTCGTCC
TCTATCTGTGCAAACCCTCCTTCGAAAGGGGCGACCCGCACAACGACGCA
TGCCCCCTTGGGAACAAAGGATCCCCTACTCCATACACTTCTAGACGATC
CGGAAGCATCCAGCTCGAATCCTCCGCAGAGCCGGGATGATATTGCTGAC
TTCCATCACGCATCCTCCCACTCCTCCTCTACCAGCTTCTTGAAAAAACG
CCGGAAGCAATTCGAGATCCCTCCGCACCAAGTCCCCGGACAAGCCTACC
ACGCTACCATTCAGAAGCTGAAGGCTTTGTACCGAGGGAAAGTGTTGGAG
TTGGAGGAAAAGTACCTCTTTCATCGCTTCGGTTTCGAAGAACTCACACA
GCAGCAGCTGGAGGCAAAGGCCCAGGAGCAGATGCATACTCAAGACGTTG
AAGAAATCGAGGAAGACGACGGGTTTGAAGACCTTGGGAGGAGGGATGAC
GAAGTTAAGCGACGCGGCAACAGTGTCGATGATGAGAACCTGAAGCTAGC
AGGTCTTGCAGGGATGCACGTTGACCGCAACTACAAGACAGACTTCGATC
TTTACTACAAGATGAATGGTGACAGAATTAAAACTAATGCTGGTAATAGC
GACTGGCAAAAGGAGCAGGAGGAAGAGGTAGCTACTGCCCATACTCATCC
CTTGATACGTGGCCATCGTCCACGGCGATGTAGACGACGTCATCAGCGGG
AAGGTCTTGACCGAGAACCCGGCGCTGCCCTTCAAGGAAACGGAACGCTT
CGCGGGTCTAGGCGGGAAATTCCAGGCCAGCCGGTGTCCTGCGCCCATTC
TTGAGAGCCTCACCCTTATCGACACTCCCGTCCTTCTTCTGGGCCAGTAC
AGCACGGGAAAGACGACCATGATCCGGTATTTGCTCGGACGCGAGTATCT
CGGTCTACACGTGGGGCCCGAGCCTACCACTGACAGAAAGAACCGCGTCT
ACGCAAAAGTCGTGAGGGAAAGCCACGTGGCCCCCCTAACAGAGGAGCCC
CCTCCCCTCTCCCCTCCACCTCGTCCTCTATCTGTGCAAACCCTCCTTCG
AAAGGGGCGACCCGCACAACGACGCATGCCCCCTTGGGAACAAAGGATCC
CCTACTCCATACACTTCTAGACGATCCGGAAGCATCCAGCTCGAATCCTC
CGCAGAGCCGGGATGATATTGCTGACTTCCATCACGCATCCTCCCACTCC
TCCTCTACCAGCTTCTTGAAAAAACGCCGGAAGCAATTCGAGATCCCTCC
GCACCAAGTCCCCGGACAAGCCTACCACGCTACCATTCAGAAGCTGAAGG
CTTTGTACCGAGGGAAAGTGTTGGAGTTGGAGGAAAAGTACCTCTTTCAT
CGCTTCGGTTTCGAAGAACTCACACAGCAGCAGCTGGAGGCAAAGGCCCA
GGAGCAGATGCATACTCAAGACGTTGAAGAAATCGAGGAAGACGACGGGT
TTGAAGACCTTGGGAGGAGGGATGACGAAGTTAAGCGACGCGGCAACAGT
GTCGATGATGAGAACCTGAAGCTAGCAGGTCTTGCAGGGATGCACGTTGA
CCGCAACTACAAGACAGACTTCGATCTTTACTACAAGATGAATGGTGACA
GAATTAAAACTAATGCTGGTAATAGCGACTGGCAAAAGGAGCAGGAGGAA
GAGGTAGCTACTGCCCATACTCATCCCTTG back to top
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