EWM23811.1, cds6862 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|585105058|gb|EWM23811.1| (endocytosis signaling protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0
Query: 1 MHVDRNYKTDFDLYYKMNGDRIKTNAGNSDWQKEQEEEVATAHTHPLEQMHTQDVEEIEEDDGFEDLGRRDDEVKRRGNSVDDENLKLAGLAGKEPRLRKSREGKPRGPPNRGAPSPLPSTSSSICANPPSKGATRTTTHAPLGTKDPLLHTLLDDPEASSSNPPQSRDDIADFHHASSHSSSTSFLKKRRKQFEIPPHQVPGQAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFAGLGGKFQASRCPAPILESLTLIDTP 342
MHVDRNYKTDFDLYYKMNGDRIKTNAGNSDWQKEQEEEVATAHTHPLEQMHTQDVEEIEEDDGFEDLGRRDDEVKRRGNSVDDENLKLAGLAGKEPRLRKSREGKPRGPPNRGAPSPLPSTSSSICANPPSKGATRTTTHAPLGTKDPLLHTLLDDPEASSSNPPQSRDDIADFHHASSHSSSTSFLKKRRKQFEIPPHQVPGQAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFAGLGGKFQASRCPAPILESLTLIDTP
Sbjct: 1 MHVDRNYKTDFDLYYKMNGDRIKTNAGNSDWQKEQEEEVATAHTHPLEQMHTQDVEEIEEDDGFEDLGRRDDEVKRRGNSVDDENLKLAGLAGKEPRLRKSREGKPRGPPNRGAPSPLPSTSSSICANPPSKGATRTTTHAPLGTKDPLLHTLLDDPEASSSNPPQSRDDIADFHHASSHSSSTSFLKKRRKQFEIPPHQVPGQAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFAGLGGKFQASRCPAPILESLTLIDTP 342
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|241690307|ref|XP_002411757.1| (endocytosis/signaling protein EHD1, putative [Ixodes scapularis] >gi|215504592|gb|EEC14086.1| endocytosis/signaling protein EHD1, putative [Ixodes scapularis]) HSP 1 Score: 134.806 bits (338), Expect = 3.142e-33 Identity = 63/140 (45.00%), Postives = 92/140 (65.71%), Query Frame = 0
Query: 204 QAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFAG-LGGKFQASRCPAPILESLTLIDTP 342
+ Y+ ++ LK +Y+ K+L LEE YLFH F L E+K +LL+GQYSTGKTT IRYLL R++ G+ +GPEPTTDR++A+++ D + VI G L +P F+ +F +FQ S +P+L+S+T+IDTP
Sbjct: 16 EIYNTVVEGLKQIYKAKILPLEEHYLFHDFHSPPLADPDFESKPMILLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRFIAVMYSDQEGVIPGNALVVDPKKQFRPLAKFGNSFLNRFQCSTLASPVLQSMTIIDTP 155
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|298713481|emb|CBJ27036.1| (RME1, RME-1/EHD family ATPase with a C-terminal EH domain [Ectocarpus siliculosus]) HSP 1 Score: 138.658 bits (348), Expect = 6.429e-33 Identity = 66/140 (47.14%), Postives = 96/140 (68.57%), Query Frame = 0
Query: 204 QAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERF-AGLGGKFQASRCPAPILESLTLIDTP 342
+A A ++ LK LY K+ LE+ Y+F F LT + E+K QVL+ GQYSTGKT+ IRYLLGR++ G +GPEPTTDR+VA++ G + V+ G LT +P LP++ +RF KF+AS+ P+P+L ++T++DTP
Sbjct: 8 EATAAVVEGLKRLYHTKLKPLEQTYMFGWFHSPPLTDSEFESKPQVLMCGQYSTGKTSFIRYLLGRDFPGQRIGPEPTTDRFVAVMDGSDERVVPGNALTVSPNLPYRGLDRFGVSFLNKFEASQLPSPVLRNITIVDTP 147
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|934151862|gb|KPM02679.1| (EH domain-containing protein 1-like protein [Sarcoptes scabiei]) HSP 1 Score: 133.265 bits (334), Expect = 1.230e-32 Identity = 61/140 (43.57%), Postives = 90/140 (64.29%), Query Frame = 0
Query: 204 QAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFA-GLGGKFQASRCPAPILESLTLIDTP 342
+ Y + ++ LK +YR K+L LEE+YLFH F +AK VLL+GQYSTGKTT IRYLL R++ G+ +GPEPTTDR++A++H + + +I G L +P F+ +F + Q S +PIL+ +++IDTP
Sbjct: 16 ELYESVVEGLKRIYRTKILPLEEQYLFHEFHSPPFDDADFDAKPMVLLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRFIAVMHNEQEGIIPGNALVVDPKKQFRPLAKFGNAFLNRLQCSNVNSPILQQISIIDTP 155
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|1126183785|ref|XP_019624479.1| (PREDICTED: EH domain-containing protein 1-like [Branchiostoma belcheri]) HSP 1 Score: 136.346 bits (342), Expect = 1.654e-32 Identity = 67/140 (47.86%), Postives = 90/140 (64.29%), Query Frame = 0
Query: 204 QAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFA-GLGGKFQASRCPAPILESLTLIDTP 342
Q Y ++ LK +YR K+ LEE Y FH F L +AK VLL+GQYSTGKTT IRYLL RE+ G+ +GPEPTTDR++A++H + + VI G L +P F+ +F +FQ S+ P+P+LESLT +DTP
Sbjct: 14 QVYGNVVEGLKQVYREKLYPLEEHYKFHDFHSPALDDPDFDAKPMVLLVGQYSTGKTTFIRYLLEREFPGIRIGPEPTTDRFIAVMHSESEGVIPGNALVMDPKKQFRPLSKFGNAFLNRFQCSQLPSPVLESLTFVDTP 153
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|551625453|ref|XP_005792863.1| (RME1A, RME-1/EHD family protein, partial [Emiliania huxleyi CCMP1516] >gi|485647211|gb|EOD40434.1| RME1A, RME-1/EHD family protein, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 127.487 bits (319), Expect = 2.220e-32 Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 196 IPPHQVPGQAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFA-GLGGKFQASRCPAPILESLTLIDTP 342
+P + + + + LK LYR K+ +EE Y F F + +AK VLLLGQYS GKT+ I+YLLGR++ G H+GPEPTTDR++A++HG D G L + +PF+ E F G KFQ ++ +P+L +TLIDTP
Sbjct: 1 MPKKEPVAEIFESVSDGLKQLYRSKIRPIEEAYKFGEFYSPYMNDSDFDAKPMVLLLGQYSVGKTSFIKYLLGRDFPGAHIGPEPTTDRFIAVMHGQEDKTTPGNALAVSANMPFRGLEMFGNGFLSKFQGAQLDSPLLHHVTLIDTP 148
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|391339887|ref|XP_003744278.1| (PREDICTED: EH domain-containing protein 3 [Galendromus occidentalis]) HSP 1 Score: 136.346 bits (342), Expect = 2.249e-32 Identity = 65/141 (46.10%), Postives = 92/141 (65.25%), Query Frame = 0
Query: 203 GQAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFAG-LGGKFQASRCPAPILESLTLIDTP 342
G Y + ++ LK +Y+ K+L LE Y FH F +L + +AK VLL+GQYSTGKTT IRYLL R++ G+ +GPEPTTDR++A++HGD + VI G L +P FK +F G + Q S +P+L S+T++DTP
Sbjct: 15 GDTYDSVVEGLKKIYKEKILPLESFYNFHDFHSPKLDEPDFDAKPMVLLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRFIAVMHGDQEGVIPGNALVVDPKKQFKPLSKFGGAFLNRLQCSTVDSPVLRSMTIVDTP 155
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|1022768497|gb|KZS13220.1| (EH domain-containing protein 2 [Daphnia magna]) HSP 1 Score: 134.806 bits (338), Expect = 8.213e-32 Identity = 58/140 (41.43%), Postives = 94/140 (67.14%), Query Frame = 0
Query: 204 QAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFA-GLGGKFQASRCPAPILESLTLIDTP 342
+ Y + ++ LK +Y+ K+L LE++Y FH F EL+ +A+ +LL+GQYSTGKTT IRYLL +++ G+ +GPEPTTDR++A++HGD + VI G L +P F+ +F +FQ S +P+L+ ++++D+P
Sbjct: 16 EIYDSVVEGLKKIYKSKILPLEQQYFFHDFHSPELSDPDFDARPMILLVGQYSTGKTTFIRYLLEKDFPGIRIGPEPTTDRFIAVMHGDTEGVIPGNALVVDPKKQFRPLSKFGNAFLNRFQCSTVDSPVLKGISIVDSP 155
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|662203763|ref|XP_008475230.1| (PREDICTED: EH domain-containing protein 3-like [Diaphorina citri]) HSP 1 Score: 132.494 bits (332), Expect = 1.292e-31 Identity = 63/140 (45.00%), Postives = 90/140 (64.29%), Query Frame = 0
Query: 204 QAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFAG-LGGKFQASRCPAPILESLTLIDTP 342
Y LK++Y+ K+L LEEKYLFH F +LT Q +AK ++L+GQYSTGKTT+I+YLLG+++ GL +GPEPTTDR++ I+ G+ + I G L +P F+ F +FQ S APIL+ ++ +DTP
Sbjct: 45 NVYGDVADGLKSVYKNKLLPLEEKYLFHEFHSPKLTDQDFDAKPLIMLIGQYSTGKTTLIKYLLGKDFPGLRIGPEPTTDRFIVIMDGEQEATIPGNALVADPTKQFRPLSIFGNSFLNRFQCSHIDAPILKYVSFVDTP 184
BLAST of EWM23811.1 vs. NCBI_GenBank
Match: gi|321469395|gb|EFX80375.1| (hypothetical protein DAPPUDRAFT_304007 [Daphnia pulex]) HSP 1 Score: 134.42 bits (337), Expect = 1.311e-31 Identity = 58/140 (41.43%), Postives = 94/140 (67.14%), Query Frame = 0
Query: 204 QAYHATIQKLKALYRGKVLELEEKYLFHRFGFEELTQQQLEAKAQVLLLGQYSTGKTTMIRYLLGREYLGLHVGPEPTTDRYVAIVHGDVDDVISGKVLTENPALPFKETERFA-GLGGKFQASRCPAPILESLTLIDTP 342
+ Y + ++ LK +Y+ K+L LE++Y FH F EL+ +A+ +LL+GQYSTGKTT IRYLL +++ G+ +GPEPTTDR++A++HGD + VI G L +P F+ +F +FQ S +P+L+ ++++D+P
Sbjct: 16 EIYDSVVEGLKKIYKSKILPLEQQYFFHDFHSPELSDPDFDARPMILLVGQYSTGKTTFIRYLLEKDFPGIRIGPEPTTDRFIAVMHGDTEGVIPGNALVVDPKKQFRPLSKFGNAFLNRFQCSTVDSPVLKGISIVDSP 155 The following BLAST results are available for this feature:
BLAST of EWM23811.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|