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Properties
| Property Name | Value |
|---|
| Product | yip1 domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100362g3.2184.mrna |
| Orig protein id | gnl|cribi|Naga_100362g3.2184 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:656872..659566 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6860 ID=rna6860|Name=rna6860|organism=Nannochloropsis gaditana|type=mRNA|length=615bp
ATGACAACAAATGCATATTCAAGACTTTTGGTGCTGACCTTCTGCACTCT
ATGGATTACATTGGCGCGTGCACAAGATCTGGAAGGCATCTGTTTGGGTT
TCAACAGAACATTTGGTGGATTGCAGAATTATAGAAGCTTGTGTCATGCC
TGTTTTGATCAGGGTTGCGGTGTCTGTGCCCCGCCTGCAAAACACAAGCA
TTACATTGGGGCGGCTTCCTGTGTGAAGGACGCAAGTTTTTGCTCCACCG
CGTACACAAAGGCGGGAGATGACGGGGCCCACCAGGTATGTAATGTCACG
ATTATCCCATTTGCAGCAGTCATTGCTGTGTTAGTCTTGTGCGTTTTGTG
CTGTGCTGGGTGTTTGGGGTATTGCGGCCTGAGTCTGCGGAGGTATTGGG
TTGTACGGCAAGTCCTCGAAGCGAAGCGAAAAGAGCAGGGGTATGGTGAG
GGAGAAGAAGAAAAAGAAGAGACGAAAGAAGGATTTCGGGAAAGTAATGC
TCATCGGGCTGGAGGCGAACACAAGTCAATTTTCAACTCAAATGTTGTGT
CGCATTTATCGCTCTCGATGCCCGCTCAGTTGTCGGCAGAGAAAGTAATG
CAACGCAACGTGTAA back to topprotein sequence of rna6860 >rna6860-protein ID=rna6860-protein|Name=rna6860|organism=Nannochloropsis gaditana|type=polypeptide|length=255bp
MASTNSGEGDFMAPSYTESASAALLRDAETGGGQMRSDATGAGEDVPAGG
LCSCLSIRYYQPYFDVDTQHVVDRIKYALFPFKKESTFIQLLGPNPDAYG
PFWVATSLIFVIAVVSNVSSYFQFVGTEGSAWTYDFAAVVTCATTIYGFA
AIIPLLIWAALRYMQLPLPLIQTVAIYGYSLVAFVPCTLLNFIPAPAFPW
LSEIAAAAASVVFLLKALGPVVMEKAPQHAMPFLASIGAVQLALALTIKL
VFFKN back to topmRNA from alignment at CM002469.1:656872..659566- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6860 ID=rna6860|Name=rna6860|organism=Nannochloropsis gaditana|type=mRNA|length=2695bp|location=Sequence derived from alignment at CM002469.1:656872..659566- (Nannochloropsis gaditana)
CAGTTAAACCGTTGCCGGTGCCTTCTTCATCGGAGACTCATGTTCTCTCT
GGTAAGCTCTGTCCACACCAAGTAATACTGACATTTCTGTCGTCGCACAT
GCCAGCACATTGCCTAGGACGTCCATTCCGGTTCGTGGCACGACCAAGAC
CATGGCCTCCACAAATAGCGGAGAAGGTGGGTGCTTTAAGACCGTTGGCA
TATAAAAAGGTCCTAATACAGTTTCATCACCGTAAACGTGTCTCATGTTC
CCAATTTCCTCGGGGCAGGCGACTTCATGGCGCCATCTTACACAGAAAGT
GCTTCCGCGGCATTGCTTCGAGATGCCGAGACCGGTGGAGGGCAAATGAG
GTCTGACGCAACTGGCGCAGGGGAGGATGTTCCCGCAGGTAAGTAGGAGT
GGTCTTATAACACCATGTGGAGGAAAATGCCGCGAGAGGGTGGCAATGTA
CGGCCTTCATGGACATTATCCTTACACTGTAGTCATGTACGACCTCACAA
CGAGGAGATCAAAAACAAAGTCTGCGTTGGTGGCTAGCGTGCCTGTTTTT
TTGATTACCCCTCTTCCGAATCTACCGCCCCTGCGCGCCTATCCCCTTCT
AAATGCCCCCACATCCTCTGTACCTCTTTCTGGTCATGGTCTTTTTACCC
TGGCACCGGTCGTAGGAGGCCTCTGTAGCTGCCTGTCGATCCGGTATTAC
CAACCTTACTTCGATGTGGACACTCAGCATGTCGTGGATCGCATCAAGTA
CGCCCTCTTCCCTTTCAAGAAAGAATCGACGTTCATCCAGGTGCGTACTT
GATGTTGCCCGTCTTGCTTTCCATACCCTCTCCCCCTTTTTCTCGTTTGG
TCGCGGGCATCCTCGTCCCCTTTGTAGGAGTGTCAGGGTGGTAGCGCCAT
CCCACCCTCCCTCCCTCCCTGATCCCGTGATACACAGCTCCTCGGGCCTA
ATCCTGACGCCTATGGGCCATTTTGGGTGGCCACCAGCCTCATTTTTGTC
ATAGCCGTGGTATCGAACGTGAGCTCCTATTTTCAATTCGTCGGGACGGA
GGGGAGTGCCTGGTGAGGAAGGGGAGGAGGGAGGGAGGGTGGAGGAATAG
GGAGGGTATGCCTAAATCATGGAATGAGAGAAAGGATGGGGAAGGGGGGG
GGAAAGAACAGGGAGGATGAGCCTGAATCATCGAGCGAGAGAATGGATGA
GGAGGGATGACAGAAGCTGGGCAGTGAGCATAAGGCCTTCGGGTCCGCGC
CACGCTCATGTAGTGCCGACATTGCCACCCCATTCACCCTCCCTCCCTTC
CTCCCCCCCCCTCCCTCCCTCCCTCCCTCCTCAGGACGTACGACTTCGCA
GCCGTGGTAACGTGCGCCACGACCATCTACGGCTTTGCGGTGAGCGGCGA
GGACCTTGCGAGCCGTGGCACGGGAACAGGGCCCGCTGTCTCCTTGTGGG
GAGCCCAAGGGATAGACGGCGGTGCACCTTGGTGCTGCTCCCCGCTCATT
TGTCCTTTTTTTCTCCCTCCCTCAGGCGATCATCCCCTTGCTTATTTGGG
CGGCGCTGCGCTACATGCAACTTCCCCTCCCGCTGATTCAAACCGTCGCT
ATCTACGGGTACTCGCTGGTGGCCTTCGTCCCCTGCACGGTGAGGATCTC
TTCTCCCAGGGAACCCTCCGGGTCCTTTTCCCGCTCCCTTCCCGTCCTTT
TCATTCCCCATCTCGGGTCAGGGAGCGTCGAACGTTTCCCCATTCACCCT
CTTCCCTCTCCTCCTTCCTCTTTCCCTCATCCCTCCTTCAGCTCCTCAAC
TTTATTCCCGCCCCTGCTTTCCCCTGGCTCTCGGAGATAGCGGCAGCCGC
AGCCTCGGTCGTCTTTCTCCTCAAAGCTCTTGGCCCTGTGGTGATGGAAA
AGGCCCCGCAACATGCCATGCCCTTTCTGGCATCGATCGGGTCAGCAAGG
GAGTGGGGAGAAAGGAGAGGGCGGGGGGGGGGGAGGAGGCGACCGGACCT
CACGGACATTTCGCATGGATGGCATACCTTCTCTCACACGCTCTCATTCT
CTGCTCTTTGATATGTTCCCGCCTGCAATCTTCTCCATCATGGCGTCTCC
CATCCCCTCTTGCAGGGCGGTGCAACTAGCTCTGGCATTGACGATCAAGC
TTGTCTTTTTCAAGAATTAATTTCTCTTAAATTTTCTATCGCCTTGGGTT
CTAGCGGCCGGGAGGAATTGAACACTTGGGAGTTGGTCTTTTTTAAGGCT
TAAAAGGGAGGCAGGAAGGGGAGGCAATGGCTCTGTGAATACGAGTTGTC
GGGAAGGGAGGAAGTCCTTGACCCAAAAACCTACACATTGTGCTCGCACA
CCGCAAGCTTTTATAGGGGGGAAAAAGGGTGTGAAAGGCAGTCAGTGCTT
GCTCCTATGAGGAGCGAGACATGCAAAAAATCTAAGCTATCTTGTCGCCG
AAAAGTGTTGAGAGGGCGGGGAGCATGGCCCGTGGTTTACAGAGAGGATA
AGACGCCTCAGATCGGAAAAAGAATACTGACAATAAGCAATCAAAGGAGA
ACGGGGGCTTTCCTTCCTTTCTCAGCCTTTTAAATGTCAAATTGTGAATA
TAAAATGTTACTTTAGAACCTCATCATAGATCATATGTTTCGCATGTATT
GAAAACTATGCAGTCCCGTAGTTGGGTATCGGCCCATATCGAAGC back to topCoding sequence (CDS) from alignment at CM002469.1:656872..659566- >rna6860 ID=rna6860|Name=rna6860|organism=Nannochloropsis gaditana|type=CDS|length=6144bp|location=Sequence derived from alignment at CM002469.1:656872..659566- (Nannochloropsis gaditana)
GGCGGTGCAACTAGCTCTGGCATTGACGATCAAGCTTGTCTTTTTCAAGA
ATTAACTCCTCAACTTTATTCCCGCCCCTGCTTTCCCCTGGCTCTCGGAG
ATAGCGGCAGCCGCAGCCTCGGTCGTCTTTCTCCTCAAAGCTCTTGGCCC
TGTGGTGATGGAAAAGGCCCCGCAACATGCCATGCCCTTTCTGGCATCGA
TCGGGCGATCATCCCCTTGCTTATTTGGGCGGCGCTGCGCTACATGCAAC
TTCCCCTCCCGCTGATTCAAACCGTCGCTATCTACGGGTACTCGCTGGTG
GCCTTCGTCCCCTGCACGGACGTACGACTTCGCAGCCGTGGTAACGTGCG
CCACGACCATCTACGGCTTTGCGCTCCTCGGGCCTAATCCTGACGCCTAT
GGGCCATTTTGGGTGGCCACCAGCCTCATTTTTGTCATAGCCGTGGTATC
GAACGTGAGCTCCTATTTTCAATTCGTCGGGACGGAGGGGAGTGCCTGGA
GGCCTCTGTAGCTGCCTGTCGATCCGGTATTACCAACCTTACTTCGATGT
GGACACTCAGCATGTCGTGGATCGCATCAAGTACGCCCTCTTCCCTTTCA
AGAAAGAATCGACGTTCATCCAGGCGACTTCATGGCGCCATCTTACACAG
AAAGTGCTTCCGCGGCATTGCTTCGAGATGCCGAGACCGGTGGAGGGCAA
ATGAGGTCTGACGCAACTGGCGCAGGGGAGGATGTTCCCGCAGATGGCCT
CCACAAATAGCGGAGAAGGGCGGTGCAACTAGCTCTGGCATTGACGATCA
AGCTTGTCTTTTTCAAGAATTAACTCCTCAACTTTATTCCCGCCCCTGCT
TTCCCCTGGCTCTCGGAGATAGCGGCAGCCGCAGCCTCGGTCGTCTTTCT
CCTCAAAGCTCTTGGCCCTGTGGTGATGGAAAAGGCCCCGCAACATGCCA
TGCCCTTTCTGGCATCGATCGGGCGATCATCCCCTTGCTTATTTGGGCGG
CGCTGCGCTACATGCAACTTCCCCTCCCGCTGATTCAAACCGTCGCTATC
TACGGGTACTCGCTGGTGGCCTTCGTCCCCTGCACGGACGTACGACTTCG
CAGCCGTGGTAACGTGCGCCACGACCATCTACGGCTTTGCGCTCCTCGGG
CCTAATCCTGACGCCTATGGGCCATTTTGGGTGGCCACCAGCCTCATTTT
TGTCATAGCCGTGGTATCGAACGTGAGCTCCTATTTTCAATTCGTCGGGA
CGGAGGGGAGTGCCTGGAGGCCTCTGTAGCTGCCTGTCGATCCGGTATTA
CCAACCTTACTTCGATGTGGACACTCAGCATGTCGTGGATCGCATCAAGT
ACGCCCTCTTCCCTTTCAAGAAAGAATCGACGTTCATCCAGGCGACTTCA
TGGCGCCATCTTACACAGAAAGTGCTTCCGCGGCATTGCTTCGAGATGCC
GAGACCGGTGGAGGGCAAATGAGGTCTGACGCAACTGGCGCAGGGGAGGA
TGTTCCCGCAGATGGCCTCCACAAATAGCGGAGAAGGGCGGTGCAACTAG
CTCTGGCATTGACGATCAAGCTTGTCTTTTTCAAGAATTAACTCCTCAAC
TTTATTCCCGCCCCTGCTTTCCCCTGGCTCTCGGAGATAGCGGCAGCCGC
AGCCTCGGTCGTCTTTCTCCTCAAAGCTCTTGGCCCTGTGGTGATGGAAA
AGGCCCCGCAACATGCCATGCCCTTTCTGGCATCGATCGGGCGATCATCC
CCTTGCTTATTTGGGCGGCGCTGCGCTACATGCAACTTCCCCTCCCGCTG
ATTCAAACCGTCGCTATCTACGGGTACTCGCTGGTGGCCTTCGTCCCCTG
CACGGACGTACGACTTCGCAGCCGTGGTAACGTGCGCCACGACCATCTAC
GGCTTTGCGCTCCTCGGGCCTAATCCTGACGCCTATGGGCCATTTTGGGT
GGCCACCAGCCTCATTTTTGTCATAGCCGTGGTATCGAACGTGAGCTCCT
ATTTTCAATTCGTCGGGACGGAGGGGAGTGCCTGGAGGCCTCTGTAGCTG
CCTGTCGATCCGGTATTACCAACCTTACTTCGATGTGGACACTCAGCATG
TCGTGGATCGCATCAAGTACGCCCTCTTCCCTTTCAAGAAAGAATCGACG
TTCATCCAGGCGACTTCATGGCGCCATCTTACACAGAAAGTGCTTCCGCG
GCATTGCTTCGAGATGCCGAGACCGGTGGAGGGCAAATGAGGTCTGACGC
AACTGGCGCAGGGGAGGATGTTCCCGCAGATGGCCTCCACAAATAGCGGA
GAAGGGCGGTGCAACTAGCTCTGGCATTGACGATCAAGCTTGTCTTTTTC
AAGAATTAACTCCTCAACTTTATTCCCGCCCCTGCTTTCCCCTGGCTCTC
GGAGATAGCGGCAGCCGCAGCCTCGGTCGTCTTTCTCCTCAAAGCTCTTG
GCCCTGTGGTGATGGAAAAGGCCCCGCAACATGCCATGCCCTTTCTGGCA
TCGATCGGGCGATCATCCCCTTGCTTATTTGGGCGGCGCTGCGCTACATG
CAACTTCCCCTCCCGCTGATTCAAACCGTCGCTATCTACGGGTACTCGCT
GGTGGCCTTCGTCCCCTGCACGGACGTACGACTTCGCAGCCGTGGTAACG
TGCGCCACGACCATCTACGGCTTTGCGCTCCTCGGGCCTAATCCTGACGC
CTATGGGCCATTTTGGGTGGCCACCAGCCTCATTTTTGTCATAGCCGTGG
TATCGAACGTGAGCTCCTATTTTCAATTCGTCGGGACGGAGGGGAGTGCC
TGGAGGCCTCTGTAGCTGCCTGTCGATCCGGTATTACCAACCTTACTTCG
ATGTGGACACTCAGCATGTCGTGGATCGCATCAAGTACGCCCTCTTCCCT
TTCAAGAAAGAATCGACGTTCATCCAGGCGACTTCATGGCGCCATCTTAC
ACAGAAAGTGCTTCCGCGGCATTGCTTCGAGATGCCGAGACCGGTGGAGG
GCAAATGAGGTCTGACGCAACTGGCGCAGGGGAGGATGTTCCCGCAGATG
GCCTCCACAAATAGCGGAGAAGGGCGGTGCAACTAGCTCTGGCATTGACG
ATCAAGCTTGTCTTTTTCAAGAATTAACTCCTCAACTTTATTCCCGCCCC
TGCTTTCCCCTGGCTCTCGGAGATAGCGGCAGCCGCAGCCTCGGTCGTCT
TTCTCCTCAAAGCTCTTGGCCCTGTGGTGATGGAAAAGGCCCCGCAACAT
GCCATGCCCTTTCTGGCATCGATCGGGCGATCATCCCCTTGCTTATTTGG
GCGGCGCTGCGCTACATGCAACTTCCCCTCCCGCTGATTCAAACCGTCGC
TATCTACGGGTACTCGCTGGTGGCCTTCGTCCCCTGCACGGACGTACGAC
TTCGCAGCCGTGGTAACGTGCGCCACGACCATCTACGGCTTTGCGCTCCT
CGGGCCTAATCCTGACGCCTATGGGCCATTTTGGGTGGCCACCAGCCTCA
TTTTTGTCATAGCCGTGGTATCGAACGTGAGCTCCTATTTTCAATTCGTC
GGGACGGAGGGGAGTGCCTGGAGGCCTCTGTAGCTGCCTGTCGATCCGGT
ATTACCAACCTTACTTCGATGTGGACACTCAGCATGTCGTGGATCGCATC
AAGTACGCCCTCTTCCCTTTCAAGAAAGAATCGACGTTCATCCAGGCGAC
TTCATGGCGCCATCTTACACAGAAAGTGCTTCCGCGGCATTGCTTCGAGA
TGCCGAGACCGGTGGAGGGCAAATGAGGTCTGACGCAACTGGCGCAGGGG
AGGATGTTCCCGCAGATGGCCTCCACAAATAGCGGAGAAGGGCGGTGCAA
CTAGCTCTGGCATTGACGATCAAGCTTGTCTTTTTCAAGAATTAACTCCT
CAACTTTATTCCCGCCCCTGCTTTCCCCTGGCTCTCGGAGATAGCGGCAG
CCGCAGCCTCGGTCGTCTTTCTCCTCAAAGCTCTTGGCCCTGTGGTGATG
GAAAAGGCCCCGCAACATGCCATGCCCTTTCTGGCATCGATCGGGCGATC
ATCCCCTTGCTTATTTGGGCGGCGCTGCGCTACATGCAACTTCCCCTCCC
GCTGATTCAAACCGTCGCTATCTACGGGTACTCGCTGGTGGCCTTCGTCC
CCTGCACGGACGTACGACTTCGCAGCCGTGGTAACGTGCGCCACGACCAT
CTACGGCTTTGCGCTCCTCGGGCCTAATCCTGACGCCTATGGGCCATTTT
GGGTGGCCACCAGCCTCATTTTTGTCATAGCCGTGGTATCGAACGTGAGC
TCCTATTTTCAATTCGTCGGGACGGAGGGGAGTGCCTGGAGGCCTCTGTA
GCTGCCTGTCGATCCGGTATTACCAACCTTACTTCGATGTGGACACTCAG
CATGTCGTGGATCGCATCAAGTACGCCCTCTTCCCTTTCAAGAAAGAATC
GACGTTCATCCAGGCGACTTCATGGCGCCATCTTACACAGAAAGTGCTTC
CGCGGCATTGCTTCGAGATGCCGAGACCGGTGGAGGGCAAATGAGGTCTG
ACGCAACTGGCGCAGGGGAGGATGTTCCCGCAGATGGCCTCCACAAATAG
CGGAGAAGGGCGGTGCAACTAGCTCTGGCATTGACGATCAAGCTTGTCTT
TTTCAAGAATTAACTCCTCAACTTTATTCCCGCCCCTGCTTTCCCCTGGC
TCTCGGAGATAGCGGCAGCCGCAGCCTCGGTCGTCTTTCTCCTCAAAGCT
CTTGGCCCTGTGGTGATGGAAAAGGCCCCGCAACATGCCATGCCCTTTCT
GGCATCGATCGGGCGATCATCCCCTTGCTTATTTGGGCGGCGCTGCGCTA
CATGCAACTTCCCCTCCCGCTGATTCAAACCGTCGCTATCTACGGGTACT
CGCTGGTGGCCTTCGTCCCCTGCACGGACGTACGACTTCGCAGCCGTGGT
AACGTGCGCCACGACCATCTACGGCTTTGCGCTCCTCGGGCCTAATCCTG
ACGCCTATGGGCCATTTTGGGTGGCCACCAGCCTCATTTTTGTCATAGCC
GTGGTATCGAACGTGAGCTCCTATTTTCAATTCGTCGGGACGGAGGGGAG
TGCCTGGAGGCCTCTGTAGCTGCCTGTCGATCCGGTATTACCAACCTTAC
TTCGATGTGGACACTCAGCATGTCGTGGATCGCATCAAGTACGCCCTCTT
CCCTTTCAAGAAAGAATCGACGTTCATCCAGGCGACTTCATGGCGCCATC
TTACACAGAAAGTGCTTCCGCGGCATTGCTTCGAGATGCCGAGACCGGTG
GAGGGCAAATGAGGTCTGACGCAACTGGCGCAGGGGAGGATGTTCCCGCA
GATGGCCTCCACAAATAGCGGAGAAGGGCGGTGCAACTAGCTCTGGCATT
GACGATCAAGCTTGTCTTTTTCAAGAATTAACTCCTCAACTTTATTCCCG
CCCCTGCTTTCCCCTGGCTCTCGGAGATAGCGGCAGCCGCAGCCTCGGTC
GTCTTTCTCCTCAAAGCTCTTGGCCCTGTGGTGATGGAAAAGGCCCCGCA
ACATGCCATGCCCTTTCTGGCATCGATCGGGCGATCATCCCCTTGCTTAT
TTGGGCGGCGCTGCGCTACATGCAACTTCCCCTCCCGCTGATTCAAACCG
TCGCTATCTACGGGTACTCGCTGGTGGCCTTCGTCCCCTGCACGGACGTA
CGACTTCGCAGCCGTGGTAACGTGCGCCACGACCATCTACGGCTTTGCGC
TCCTCGGGCCTAATCCTGACGCCTATGGGCCATTTTGGGTGGCCACCAGC
CTCATTTTTGTCATAGCCGTGGTATCGAACGTGAGCTCCTATTTTCAATT
CGTCGGGACGGAGGGGAGTGCCTGGAGGCCTCTGTAGCTGCCTGTCGATC
CGGTATTACCAACCTTACTTCGATGTGGACACTCAGCATGTCGTGGATCG
CATCAAGTACGCCCTCTTCCCTTTCAAGAAAGAATCGACGTTCATCCAGG
CGACTTCATGGCGCCATCTTACACAGAAAGTGCTTCCGCGGCATTGCTTC
GAGATGCCGAGACCGGTGGAGGGCAAATGAGGTCTGACGCAACTGGCGCA
GGGGAGGATGTTCCCGCAGATGGCCTCCACAAATAGCGGAGAAG back to top
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