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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100273g2.3661.mrna |
| Orig protein id | gnl|cribi|Naga_100273g2.3661 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:640811..642541 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6852 ID=rna6852|Name=rna6852|organism=Nannochloropsis gaditana|type=mRNA|length=1451bp
GTGCCCTCCGTCACCGTAACAGACACCGGCAATTGAGGGAGCGCGTGTCG
ATTTTTTTGGGGCTCTGCTTGCGGGCTCCCCCCTTTCCGTCAATCATGCG
GCAACAGTTGCACCGTCCTGCCCCAAGACGGTCGTCCCGGCTTCTCCTTT
TGCTTGCTTTGGTACTCGGGGCATCATATTCCAATGCCTTTGTCTCTTCT
CCCCTTTTGAAAAAGCTCGCTCCTCTAGCCCACAAACAGAGATGTCGCAT
GTCTGCGCCGCAGGAAGAAGGGTCATCAAGCACAGACCTTCACACTGCCC
AATCGTCATTGAGCCTGAATCGTGCCGATCTTCTCAAGCGGACTTTAAGG
GCTGCTTCCTCCTTCTCTCTGGTGTGGCTCACCGGCCAGCGAGAGGCGGA
CGCGGGGGAGGAAGGCGCTCCGGACGCCTCCGTGGAGGTGGCTAAGGAAA
GTGCACAGCCTGCTCCCGTCTCGCCTCCAGCAACTGCCCCCGGCCCATTG
AAAACTGCCTACGATTATGCCGTACCCTACGACGGCGTGCGGGTGCCCCT
CGGGAATTTTCGGGGGAAAGCGGTCGTTGTGTGCAATGCCAAGACCGACG
ATCCGGAGAGCTTGGCGCAGATTCCAGGCCTCACGTATTTGACGGGGAAG
TACAGCAAGAAAGGCTTGAAGGTATGGGTGTTCACCACCGAACAAGGCAC
CTTCGAAACGGACGAGGACCGAGTAATCCGCATCAAGTACTATCAACAGT
ACGGCTTTGGTCAATACCCTAACAGCTTGGTGTTCGACAAGATTGACATT
GTTGGAAAGCGCGCCGATCCGTTCTACAAATTCTTGTGCAAAACGTTGCG
GAATCCGAACAAGATCGCCCGCATCACTTTGAATTTTGAAAAATTCCTGT
TGGATGCCAACGGTCGCCCCGTCCGCCGTTACCCGCGCCGTTACACTGCC
TACGACATGGAAGAAGATGTGAAAGCCGTGCTGGCGGGGGAGCCCCTGCC
CCCCCCCAGCCCGAAACTGATCAAAGCCTGGCGCGACGCTTATGTCGAAG
CGGAACGGAGCGAGTATGCGTTCAAGAAGGGTCTGAATTACTACGAGCCG
TTGGGGGAGGACCAACGCAGCCTTCCCTGAGCGGCTGGGTGACGAGGGAG
GGAAAGGGGGGGGGGAAGGTTGAGAGGGGGGCAAGTCCCCATGGAAGCGA
GAGGGAGGTACTCGAGAGGGAAAGAGAAAGTGCTGAAAATTAAGCAACAC
CTTCTTGGCGAAAGAAAGCACTGCAAGAAATCATCATAGACGCGAAGGGA
AACGTTCATGCTACGGTTGTGATGTCCCGGGTTATTGCATACTGTCCTGG
GACAAGACTCTCCTCCCGCCTTTCCTCCCTCCCTCCCTCCCTAAATGTAG
CCCAAATGCGTCGGTTCCTGAGAATACTGGACGAAAAGCTCCTTCCCCTC
C back to topprotein sequence of rna6852 >rna6852-protein ID=rna6852-protein|Name=rna6852|organism=Nannochloropsis gaditana|type=polypeptide|length=378bp
MHKRVFLFSRDDGLLVFILKLRARASNNCLPRSTRRTRRHAPFCFFPPLR
WARGWTPSSLSAVTAALSSPSSSFYPSPLRVHCQAYHASQSANELSNILP
ISSSAVPERKLDQALVPWLEKHTSLPSFSSATPLLPPTLLDVRPSSIPNA
GRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFM
IGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWL
EGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFR
TIRVTVAASAAPAAPASSFPPSFPPSLLPSLPTLSASGNNARERVVIAVV
AVEAMEGGAEGKELFVQYSQEPTHLGYI back to topmRNA from alignment at CM002469.1:640811..642541- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6852 ID=rna6852|Name=rna6852|organism=Nannochloropsis gaditana|type=mRNA|length=1731bp|location=Sequence derived from alignment at CM002469.1:640811..642541- (Nannochloropsis gaditana)
ATGCACAAGCGTGTCGCTGAGGGTAGTGGGCGAGGGGGGTGATAGCACCG
ACACATGGGACTGCACAGGCCGCGACAAGGCCACCCCAACACGAGGACTT
CGGCACGCGTTCTTGTACCATCGGACACCGAAGACAAGAGGAATGGCGTC
CGGTGAATTGACCGGACCAGGTGTTTTTGTTTTCCCGGGACGATGGCCTT
CTTGTTTTTATCCTGAAGTTGAGAGCCAGGGTACGTCACGTCCCGTGCAT
TGCTTGTCTAGAAGCCTACTCTCACACAAAGCCGTGAGTTTCTGACAGCA
TGACCTACTCTACACAGGCAAGCAATAATTGCCTTCCACGCAGCACAAGA
AGAACGAGGCGACACGCTCCTTTCTGTTTTTTCCCTCCTTTAAGGTGGGC
ACGGGGTTGGACTCCTTCCTCCCTGTCCGCTGTCACTGCCGCCCTCTCTT
CTCCTTCCTCGTCTTTTTATCCCTCGCCCCTCCGTGTCCATTGCCAGGCA
TATCATGCATCGCAGTCGGCGAATGAACTGTCGAATATTCTCCCTATCTC
GTCTAGTGCCGTCCCGGAGAGGAAGCTGGACCAGGCCCTGGTTCCGTGGC
TGGAAAAACATACCTCTCTCCCTTCCTTTTCTTCAGCTACGCCTCTGTTG
CCTCCTACCCTCCTTGACGTCCGTCCTTCATCCATACCCAATGCCGGGCG
TGGGCTTTGGCTCAAACCCTATCAGACTGTTGCCAAGGGCGACATCCTCA
CGCTATATCCCGGTAAGGAAAATGACCTTTCCCCACACATGAATGATACG
CTGCAGGCGTTACCCTTGCTATTCCGCTCACAATAGGACTCATTTATGAA
CTGCCTCACGACCTGGCGGCGCTGATGCCGTCCGAAGATGCTTTTGCCTT
TGCCCCACCGGACTTCATGATAGGTAAAGGGGCATTCAATCTACCTCCCT
CCCCTTGGGTGGTTTGAGTTGACACGTGCTCATGTAGCGGATATCCGGCC
TTTTCAAAAAAGATGGAGCCCAACATTCCCTACCTATCGACCCGAGTGCT
GTACTGCGTCGTCAGTCACCCTGCTTCTGTCCCTGAACTCCTTCCACCCC
TCCTCCCCTCCCTGCTCCTTCTTCGTGCCCCGTGGGTACCGTGGGGTGCT
TTAACAACGTCCCCCTCCTCCTCCCTTCTTGTCCTTACCACATGTCAGGA
AATGCCTTCCTTTTGCGCGTGTCCGTGTCGTCTCGGGATTTTCTCTGCGA
CGGGCGGCCGTTTGGGTTGTCGGCCCATATGTTTCGCGCAATTTCTCGAC
GGCAACACGAGCGGCTTGGCCTCCAGGTCAACGACGCTTGGTTGGAGGGG
GAGGGGGAAGGCGGGAAGGAAAACGGGAAAGGGACAGCAAAGGAAAAAGG
CGCCGAGGGCGGAGGCAAGAGGTCGAGCCTGGCGTGGGGTCATCTCATCA
ACGATCCCCAGGGGAGCGGGGGGCGCCCCAACGTGGCGTTTCGGACGATC
CGTGTCACTGTTGCCGCGTCGGCGGCGCCGGCGGCCCCGGCGTCCTCCTT
CCCTCCCTCCTTCCCTCCCTCCCTCCTGCCCTCCCTCCCGACCCTGTCCG
CCTCGGGGAACAATGCGAGGGAACGCGTGGTGATCGCGGTCGTGGCCGTG
GAAGCGATGGAGGGAGGGGCGGAGGGGAAGGAGCTTTTCGTCCAGTATTC
TCAGGAACCGACGCATTTGGGCTACATTTAG back to topCoding sequence (CDS) from alignment at CM002469.1:640811..642541- >rna6852 ID=rna6852|Name=rna6852|organism=Nannochloropsis gaditana|type=CDS|length=5685bp|location=Sequence derived from alignment at CM002469.1:640811..642541- (Nannochloropsis gaditana)
GAAATGCCTTCCTTTTGCGCGTGTCCGTGTCGTCTCGGGATTTTCTCTGC
GACGGGCGGCCGTTTGGGTTGTCGGCCCATATGTTTCGCGCAATTTCTCG
ACGGCAACACGAGCGGCTTGGCCTCCAGGTCAACGACGCTTGGTTGGAGG
GGGAGGGGGAAGGCGGGAAGGAAAACGGGAAAGGGACAGCAAAGGAAAAA
GGCGCCGAGGGCGGAGGCAAGAGGTCGAGCCTGGCGTGGGGTCATCTCAT
CAACGATCCCCAGGGGAGCGGGGGGCGCCCCAACGTGGCGTTTCGGACGA
TCCGTGTCACTGTTGCCGCGTCGGCGGCGCCGGCGGCCCCGGCGTCCTCC
TTCCCTCCCTCCTTCCCTCCCTCCCTCCTGCCCTCCCTCCCGACCCTGTC
CGCCTCGGGGAACAATGCGAGGGAACGCGTGGTGATCGCGGTCGTGGCCG
TGGAAGCGATGGAGGGAGGGGCGGAGGGGAAGGAGCTTTTCGTCCAGTAT
TCTCAGGAACCGACGCATTTGGGCTACATTTAGGACTCATTTATGAACTG
CCTCACGACCTGGCGGCGCTGATGCCGTCCGAAGATGCTTTTGCCTTTGC
CCCACCGGACTTCATGATAGGCAAGCAATAATTGCCTTCCACGCAGCACA
AGAAGAACGAGGCGACACGCTCCTTTCTGTTTTTTCCCTCCTTTAAGGTG
GGCACGGGGTTGGACTCCTTCCTCCCTGTCCGCTGTCACTGCCGCCCTCT
CTTCTCCTTCCTCGTCTTTTTATCCCTCGCCCCTCCGTGTCCATTGCCAG
GCATATCATGCATCGCAGTCGGCGAATGAACTGTCGAATATTCTCCCTAT
CTCGTCTAGTGCCGTCCCGGAGAGGAAGCTGGACCAGGCCCTGGTTCCGT
GGCTGGAAAAACATACCTCTCTCCCTTCCTTTTCTTCAGCTACGCCTCTG
TTGCCTCCTACCCTCCTTGACGTCCGTCCTTCATCCATACCCAATGCCGG
GCGTGGGCTTTGGCTCAAACCCTATCAGACTGTTGCCAAGGGCGACATCC
TCACGCTATATCCCGGTGTTTTTGTTTTCCCGGGACGATGGCCTTCTTGT
TTTTATCCTGAAGTTGAGAGCCAGGATGCACAAGCGTGAAATGCCTTCCT
TTTGCGCGTGTCCGTGTCGTCTCGGGATTTTCTCTGCGACGGGCGGCCGT
TTGGGTTGTCGGCCCATATGTTTCGCGCAATTTCTCGACGGCAACACGAG
CGGCTTGGCCTCCAGGTCAACGACGCTTGGTTGGAGGGGGAGGGGGAAGG
CGGGAAGGAAAACGGGAAAGGGACAGCAAAGGAAAAAGGCGCCGAGGGCG
GAGGCAAGAGGTCGAGCCTGGCGTGGGGTCATCTCATCAACGATCCCCAG
GGGAGCGGGGGGCGCCCCAACGTGGCGTTTCGGACGATCCGTGTCACTGT
TGCCGCGTCGGCGGCGCCGGCGGCCCCGGCGTCCTCCTTCCCTCCCTCCT
TCCCTCCCTCCCTCCTGCCCTCCCTCCCGACCCTGTCCGCCTCGGGGAAC
AATGCGAGGGAACGCGTGGTGATCGCGGTCGTGGCCGTGGAAGCGATGGA
GGGAGGGGCGGAGGGGAAGGAGCTTTTCGTCCAGTATTCTCAGGAACCGA
CGCATTTGGGCTACATTTAGGACTCATTTATGAACTGCCTCACGACCTGG
CGGCGCTGATGCCGTCCGAAGATGCTTTTGCCTTTGCCCCACCGGACTTC
ATGATAGGCAAGCAATAATTGCCTTCCACGCAGCACAAGAAGAACGAGGC
GACACGCTCCTTTCTGTTTTTTCCCTCCTTTAAGGTGGGCACGGGGTTGG
ACTCCTTCCTCCCTGTCCGCTGTCACTGCCGCCCTCTCTTCTCCTTCCTC
GTCTTTTTATCCCTCGCCCCTCCGTGTCCATTGCCAGGCATATCATGCAT
CGCAGTCGGCGAATGAACTGTCGAATATTCTCCCTATCTCGTCTAGTGCC
GTCCCGGAGAGGAAGCTGGACCAGGCCCTGGTTCCGTGGCTGGAAAAACA
TACCTCTCTCCCTTCCTTTTCTTCAGCTACGCCTCTGTTGCCTCCTACCC
TCCTTGACGTCCGTCCTTCATCCATACCCAATGCCGGGCGTGGGCTTTGG
CTCAAACCCTATCAGACTGTTGCCAAGGGCGACATCCTCACGCTATATCC
CGGTGTTTTTGTTTTCCCGGGACGATGGCCTTCTTGTTTTTATCCTGAAG
TTGAGAGCCAGGATGCACAAGCGTGAAATGCCTTCCTTTTGCGCGTGTCC
GTGTCGTCTCGGGATTTTCTCTGCGACGGGCGGCCGTTTGGGTTGTCGGC
CCATATGTTTCGCGCAATTTCTCGACGGCAACACGAGCGGCTTGGCCTCC
AGGTCAACGACGCTTGGTTGGAGGGGGAGGGGGAAGGCGGGAAGGAAAAC
GGGAAAGGGACAGCAAAGGAAAAAGGCGCCGAGGGCGGAGGCAAGAGGTC
GAGCCTGGCGTGGGGTCATCTCATCAACGATCCCCAGGGGAGCGGGGGGC
GCCCCAACGTGGCGTTTCGGACGATCCGTGTCACTGTTGCCGCGTCGGCG
GCGCCGGCGGCCCCGGCGTCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCT
CCTGCCCTCCCTCCCGACCCTGTCCGCCTCGGGGAACAATGCGAGGGAAC
GCGTGGTGATCGCGGTCGTGGCCGTGGAAGCGATGGAGGGAGGGGCGGAG
GGGAAGGAGCTTTTCGTCCAGTATTCTCAGGAACCGACGCATTTGGGCTA
CATTTAGGACTCATTTATGAACTGCCTCACGACCTGGCGGCGCTGATGCC
GTCCGAAGATGCTTTTGCCTTTGCCCCACCGGACTTCATGATAGGCAAGC
AATAATTGCCTTCCACGCAGCACAAGAAGAACGAGGCGACACGCTCCTTT
CTGTTTTTTCCCTCCTTTAAGGTGGGCACGGGGTTGGACTCCTTCCTCCC
TGTCCGCTGTCACTGCCGCCCTCTCTTCTCCTTCCTCGTCTTTTTATCCC
TCGCCCCTCCGTGTCCATTGCCAGGCATATCATGCATCGCAGTCGGCGAA
TGAACTGTCGAATATTCTCCCTATCTCGTCTAGTGCCGTCCCGGAGAGGA
AGCTGGACCAGGCCCTGGTTCCGTGGCTGGAAAAACATACCTCTCTCCCT
TCCTTTTCTTCAGCTACGCCTCTGTTGCCTCCTACCCTCCTTGACGTCCG
TCCTTCATCCATACCCAATGCCGGGCGTGGGCTTTGGCTCAAACCCTATC
AGACTGTTGCCAAGGGCGACATCCTCACGCTATATCCCGGTGTTTTTGTT
TTCCCGGGACGATGGCCTTCTTGTTTTTATCCTGAAGTTGAGAGCCAGGA
TGCACAAGCGTGAAATGCCTTCCTTTTGCGCGTGTCCGTGTCGTCTCGGG
ATTTTCTCTGCGACGGGCGGCCGTTTGGGTTGTCGGCCCATATGTTTCGC
GCAATTTCTCGACGGCAACACGAGCGGCTTGGCCTCCAGGTCAACGACGC
TTGGTTGGAGGGGGAGGGGGAAGGCGGGAAGGAAAACGGGAAAGGGACAG
CAAAGGAAAAAGGCGCCGAGGGCGGAGGCAAGAGGTCGAGCCTGGCGTGG
GGTCATCTCATCAACGATCCCCAGGGGAGCGGGGGGCGCCCCAACGTGGC
GTTTCGGACGATCCGTGTCACTGTTGCCGCGTCGGCGGCGCCGGCGGCCC
CGGCGTCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCTGCCCTCCCTC
CCGACCCTGTCCGCCTCGGGGAACAATGCGAGGGAACGCGTGGTGATCGC
GGTCGTGGCCGTGGAAGCGATGGAGGGAGGGGCGGAGGGGAAGGAGCTTT
TCGTCCAGTATTCTCAGGAACCGACGCATTTGGGCTACATTTAGGACTCA
TTTATGAACTGCCTCACGACCTGGCGGCGCTGATGCCGTCCGAAGATGCT
TTTGCCTTTGCCCCACCGGACTTCATGATAGGCAAGCAATAATTGCCTTC
CACGCAGCACAAGAAGAACGAGGCGACACGCTCCTTTCTGTTTTTTCCCT
CCTTTAAGGTGGGCACGGGGTTGGACTCCTTCCTCCCTGTCCGCTGTCAC
TGCCGCCCTCTCTTCTCCTTCCTCGTCTTTTTATCCCTCGCCCCTCCGTG
TCCATTGCCAGGCATATCATGCATCGCAGTCGGCGAATGAACTGTCGAAT
ATTCTCCCTATCTCGTCTAGTGCCGTCCCGGAGAGGAAGCTGGACCAGGC
CCTGGTTCCGTGGCTGGAAAAACATACCTCTCTCCCTTCCTTTTCTTCAG
CTACGCCTCTGTTGCCTCCTACCCTCCTTGACGTCCGTCCTTCATCCATA
CCCAATGCCGGGCGTGGGCTTTGGCTCAAACCCTATCAGACTGTTGCCAA
GGGCGACATCCTCACGCTATATCCCGGTGTTTTTGTTTTCCCGGGACGAT
GGCCTTCTTGTTTTTATCCTGAAGTTGAGAGCCAGGATGCACAAGCGTGA
AATGCCTTCCTTTTGCGCGTGTCCGTGTCGTCTCGGGATTTTCTCTGCGA
CGGGCGGCCGTTTGGGTTGTCGGCCCATATGTTTCGCGCAATTTCTCGAC
GGCAACACGAGCGGCTTGGCCTCCAGGTCAACGACGCTTGGTTGGAGGGG
GAGGGGGAAGGCGGGAAGGAAAACGGGAAAGGGACAGCAAAGGAAAAAGG
CGCCGAGGGCGGAGGCAAGAGGTCGAGCCTGGCGTGGGGTCATCTCATCA
ACGATCCCCAGGGGAGCGGGGGGCGCCCCAACGTGGCGTTTCGGACGATC
CGTGTCACTGTTGCCGCGTCGGCGGCGCCGGCGGCCCCGGCGTCCTCCTT
CCCTCCCTCCTTCCCTCCCTCCCTCCTGCCCTCCCTCCCGACCCTGTCCG
CCTCGGGGAACAATGCGAGGGAACGCGTGGTGATCGCGGTCGTGGCCGTG
GAAGCGATGGAGGGAGGGGCGGAGGGGAAGGAGCTTTTCGTCCAGTATTC
TCAGGAACCGACGCATTTGGGCTACATTTAGGACTCATTTATGAACTGCC
TCACGACCTGGCGGCGCTGATGCCGTCCGAAGATGCTTTTGCCTTTGCCC
CACCGGACTTCATGATAGGCAAGCAATAATTGCCTTCCACGCAGCACAAG
AAGAACGAGGCGACACGCTCCTTTCTGTTTTTTCCCTCCTTTAAGGTGGG
CACGGGGTTGGACTCCTTCCTCCCTGTCCGCTGTCACTGCCGCCCTCTCT
TCTCCTTCCTCGTCTTTTTATCCCTCGCCCCTCCGTGTCCATTGCCAGGC
ATATCATGCATCGCAGTCGGCGAATGAACTGTCGAATATTCTCCCTATCT
CGTCTAGTGCCGTCCCGGAGAGGAAGCTGGACCAGGCCCTGGTTCCGTGG
CTGGAAAAACATACCTCTCTCCCTTCCTTTTCTTCAGCTACGCCTCTGTT
GCCTCCTACCCTCCTTGACGTCCGTCCTTCATCCATACCCAATGCCGGGC
GTGGGCTTTGGCTCAAACCCTATCAGACTGTTGCCAAGGGCGACATCCTC
ACGCTATATCCCGGTGTTTTTGTTTTCCCGGGACGATGGCCTTCTTGTTT
TTATCCTGAAGTTGAGAGCCAGGATGCACAAGCGT back to top
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