EWM23845.1, cds6836 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23845.1 vs. NCBI_GenBank
Match: gi|585105113|gb|EWM23845.1| (hypothetical protein Naga_100273g2 [Nannochloropsis gaditana]) HSP 1 Score: 764.607 bits (1973), Expect = 0.000e+0 Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0 Query: 1 MHKRVFLFSRDDGLLVFILKLRARASNNCLPRSTRRTRRHAPFCFFPPLRWARGWTPSSLSAVTAALSSPSSSFYPSPLRVHCQAYHASQSANELSNILPISSSAVPERKLDQALVPWLEKHTSLPSFSSATPLLPPTLLDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSLLPSLPTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQEPTHLGYI 378 MHKRVFLFSRDDGLLVFILKLRARASNNCLPRSTRRTRRHAPFCFFPPLRWARGWTPSSLSAVTAALSSPSSSFYPSPLRVHCQAYHASQSANELSNILPISSSAVPERKLDQALVPWLEKHTSLPSFSSATPLLPPTLLDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSLLPSLPTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQEPTHLGYI Sbjct: 1 MHKRVFLFSRDDGLLVFILKLRARASNNCLPRSTRRTRRHAPFCFFPPLRWARGWTPSSLSAVTAALSSPSSSFYPSPLRVHCQAYHASQSANELSNILPISSSAVPERKLDQALVPWLEKHTSLPSFSSATPLLPPTLLDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSLLPSLPTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQEPTHLGYI 378
BLAST of EWM23845.1 vs. NCBI_GenBank
Match: gi|553187395|ref|XP_005854601.1| (hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526] >gi|422294453|gb|EKU21753.1| hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 692.575 bits (1786), Expect = 0.000e+0 Identity = 345/355 (97.18%), Postives = 349/355 (98.31%), Query Frame = 0 Query: 24 RASNNCLPRSTRRTRRHAPFCFFPPLRWARGWTPSSLSAVTAALSSPSSSFYPSPLRVHCQAYHASQSANELSNILPISSSAVPERKLDQALVPWLEKHTSLPSFSSATPLLPPTLLDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSLLPSLPTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQEPTHLGYI 378 +ASNNCLPRSTRRTRRHAPF FFPPLR ARGWTPSSLSAVTAALSSPSSSFYPSPL VHCQAYHASQSANELSNILPISSSAVPERKLDQALVPWLEKHTSLPSFSSATPL PPTLLDVRPSSIPNAGRGLWLKPYQ VAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENG GTAKE+GAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSL+PSLPTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQ+PTHLGYI Sbjct: 1 QASNNCLPRSTRRTRRHAPFWFFPPLRRARGWTPSSLSAVTAALSSPSSSFYPSPLCVHCQAYHASQSANELSNILPISSSAVPERKLDQALVPWLEKHTSLPSFSSATPLSPPTLLDVRPSSIPNAGRGLWLKPYQNVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGGGTAKERGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSLVPSLPTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQDPTHLGYI 355
BLAST of EWM23845.1 vs. NCBI_GenBank
Match: gi|585102573|gb|EWM22152.1| (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 92.4337 bits (228), Expect = 5.713e-17 Identity = 83/278 (29.86%), Postives = 125/278 (44.96%), Query Frame = 0 Query: 140 LDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSED-AFAFAPPDFMIGNAFLLRVS--VSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLE--------------------GEGEGGKENGKGTAKEKG----AEGGGK-------------RSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSLLPSLPTLSASGNNARERVVIAVVAVEAME--GGAEGKELFVQYSQEPTHL 375 L+ RPS++P AG GL+L + V G+++T +PGL+Y +P+DL A MP ++ +F+ PP F++ N +LLR V+++ L DG P G+SA F A ++R R N WLE G GEG K+ G+ +G EGG + + L GHL+NDP S + N F + P PP LL +P L + + V A + +E GA E++V Y+ T + Sbjct: 190 LERRPSTLPGAGMGLFLVQGR-VHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQR---RGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDPH-SPEKYNAEFHLCEL---------------PSDLPPHLLRFIPNLHFAQGIGSRHFCVLVTASKNLEVPQGAPPVEIYVPYASSFTEV 447
BLAST of EWM23845.1 vs. NCBI_GenBank
Match: gi|585102572|gb|EWM22151.1| (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 79.337 bits (194), Expect = 1.258e-12 Identity = 57/157 (36.31%), Postives = 87/157 (55.41%), Query Frame = 0 Query: 140 LDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSED-AFAFAPPDFMIGNAFLLRVS--VSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGG 293 L+ RPS++P AG GL+L + V G+++T +PGL+Y +P+DL A MP ++ +F+ PP F++ N +LLR V+++ L DG P G+SA F A ++R+ N WLE G + +G +E+G GG WG D GG Sbjct: 190 LERRPSTLPGAGMGLFLVQGR-VHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPW---ANMEWLESSPFGCRR--RGPEREEGLVEGG------WGEGRKDRGRPGG 334
BLAST of EWM23845.1 vs. NCBI_GenBank
Match: gi|552845072|ref|XP_005851253.1| (hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis] >gi|307110916|gb|EFN59151.1| hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis]) HSP 1 Score: 72.4034 bits (176), Expect = 4.725e-10 Identity = 77/246 (31.30%), Postives = 113/246 (45.93%), Query Frame = 0 Query: 140 LDVRPSSI--PNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPS--EDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQH--ERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVTVAASAAPAAPASSFPPSFPPSLLPSLPTLSASGNNARERVVIAVVAVEAMEGGAEGK--ELFVQYSQEPTHLGY 377 L RPS I P+AG G++L A G ILTLYPGL++++ + L S +DA A APP + + N +LL++ + L DG+P GLSA F+A + + VN +WL GG++ + + G E ++++L GH++N G N AF P + PPSL +P+LS G E + +V G G EL V Y P LG+ Sbjct: 608 LQRRPSGIQHPDAGDGVFLTAGGCPA-GGILTLYPGLVHDMGDFVLLLGVSAPDDACAPAPPAWTLDNHYLLQLRCLNAACLVDGQPGGLSAQRFQAAAASWAAGQPEAALVNASWL---ALGGQQRAELDGR-LGCEALLRQAAL--GHMLN--HGPAAAANAAFDMC---------------PLPAALPPSLQRYVPSLSVGGRGEEEVRWVPLVTARTALGATAGSPVELLVDYGINPLSLGF 829 The following BLAST results are available for this feature:
BLAST of EWM23845.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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