rna6845, rna6845 (mRNA) Nannochloropsis gaditana

Overview
Namerna6845
Unique Namerna6845
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length570
Alignment locationCM002469.1:626254..627912 -

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Properties
Property NameValue
Productnucleoside diphosphate kinase
Orig transcript idgnl|cribi|Naga_100273g9.3652.mrna
Orig protein idgnl|cribi|Naga_100273g9.3652
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:626254..627912 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100273g9gene6617Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6845rna6845-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23836.1cds6829Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6845 ID=rna6845|Name=rna6845|organism=Nannochloropsis gaditana|type=mRNA|length=570bp
CTCTGTCGTGTCGATTGATTGCAGGGAGCGGGGCGGAGAGTTTGCCACGA
AAGTTGTAAAGAGTGCAACACACCGGGCCCGGGCCACGGCGGTGCGACAC
GAGAGAGCACACTGCTTAGGGCGTCGGAAGAATACTAGTCACGCGTCGAA
ATTCGAACCAGCATGGACAAGACAGACCGGGCCATCACGGGCCTGGCCAA
CCTGTCTTTGACGGACAGTGGGAGTGCAGCAGAGCGAAGTCTGGAGCAGA
GCCCGTCTGTTCTCGCAGCAGACGGCGCACGCAGAAGAGAGATTGATGCC
ACAGGAACAGCAGGGACAAAGGTGGCGTGTCAGGATTTGGAAGGCATGTC
GCCTTTGGAATTTTTTGTGGAAGAAATCGAGAACGAGGATGTCTACGTCC
GGCTGGAGGCTTATCGGAGGGTCAGGCTGATTGCAGGCGCTCTGGGTCCA
CAGATGACAGAGCAAAAGCTCTTGCCTTTGTTGCTGGTCCTAGTGCCTCT
CCTGACGCGCCTGGCGGGGGCGGAGGAGACGGTGGTGAGGGAGGCGGCCG
TGGCCTCTTTGTTGAAGTAG
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protein sequence of rna6845

>rna6845-protein ID=rna6845-protein|Name=rna6845|organism=Nannochloropsis gaditana|type=polypeptide|length=211bp
MEMLRLVSLCAIVSTALSFVATGPPSRHTTAAPTARPTFAAWGTRVVPSR
SMSLHGSRGLCMAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKL
VKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTM
LGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTID
WSSHSQGWIYE
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mRNA from alignment at CM002469.1:626254..627912-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6845 ID=rna6845|Name=rna6845|organism=Nannochloropsis gaditana|type=mRNA|length=1659bp|location=Sequence derived from alignment at CM002469.1:626254..627912- (Nannochloropsis gaditana)
ACAAACCAAGAAGCACCGGGCAACTGCAACATGACGTACTCTTTCTGACA
CGAAATTCTTCCATTGATACTCTTCCTCCCTTTACATTCAGGACGTCGTA
TTACACCATGGAAATGCTTCGATTGGTCTCGCTTTGCGCCATTGTCTCCA
CTGCCTTGTCCTTCGTCGCCACCGGCCCGCCCTCCCGTCACACCACGGCA
GCACCGACGGCTCGCCCAACATTCGCAGCATGGGGCACGCGTGTGGTGCC
CAGCCGTAGCATGAGTCTGCATGGAAGTAAGTCTCTATTGAATTGCATTG
ATCACGCAGTGGTTGTATCGTCATGCGTCCTTCTGTAGGTGGAAAAAGGC
GTCCGAATGACCTGCCAAGCCGGAAGGCACGAGTCCAGGACACTCTGCGT
CATGACCCCCACCTTTTCGATTCACACCAGCGATCCCACCGAAAGCTTGC
CTATACCTAGTCGGCATAAAATACGAGCATCTCCGAACGCTTTACCCTTG
AAGACAAGGGAGGGAACGAGCCAGAGTCTTTAGGTCCTGCACTTGACTGT
TCAACCTCCTCTCTCTCCCACAGGCCGGGGACTATGCATGGCGATGGAAC
GCACCTATATCATGGCGAAACCGGACGCAGTCCAACGTGGACTCGTGTCT
GATATCATTGGGCGTTTCGAGAAAAAGGGGTACAAACTGGTCGCGTTGAA
GCTTGTCAAACCCGCCCGGTCCCTCTTGGAGGAGCACTACGACTCGTTGA
AGGTAAGAGAAAGGCGGGAAGCCTCATTGGGAGAGGTGCGCTGAGTGCCC
CACCGAATTTCGATGAGATTGGTGCCAAGAAATGGAGGACAAGGGCTCGG
TAGGCGGAAATGTTCTGTTCCTCTCACATGCGGTGGGCGGGCAGGACGAA
GGAGGACGCGCGCACACGTGCATGTGTCTATACACATGTACCTTCGATCT
AGGCCCACGAACAAGAATAAGTATCGGCAGCGACAGGCCCGCTCCCTCTC
ATCTCCGCCCCGGCGGCCTCCCGTTCCTTCCCCTCCCAGGACAAGGCCTT
CTTCCCGAGCCTGATGGACTACATGACGAGCGGCCCAGTGGTGGCGATGG
TCTGGGAGGGGAAAAACGTGGTGGCCACGGGCAGGACGATGCTGGGCGCC
ACGAACCCGTTGGAGAGTGCCCCTGGCACGATCCGGGGGGACTTCTCGAT
CGAGGTGAGGAGGAGGGGGAGGAAAGAAGACTTGGGAATAGGGGGCGTCT
AGAGTGTGGCACTGTCAAACCCTTTCGGACACGCCGAGCACATTCTCCAC
GATTCTATGCATTCATGCCTACTTCCATTTCCGTCCCTGGGGGGGGGCTT
TCATCGCTTATCTTGGTTTGGCACTCACAGGTGGGCCGGAACATATGCCA
CGGTTCAGACTCGGTGGAGAACGCAGAGCGGGAGATAAAGTTGTGGTTTG
GGGAGGGAACCATTGATTGGTCGAGCCACAGCCAGGGCTGGATTTATGAG
TAGAACTGTCGAGATGATAAAGGACGGCGAGGGAGGAACAGAGGGCACGA
GGGTGTGTTTGCGAAAGCCCAGCCTACACTTTTTCTTGGCCTCCGAAGGC
TGTGGCAGGGTTGCGACATCCGAGCGAACAAAGAAAGAGCGAAACGGAAT
CCAAACGAC
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Coding sequence (CDS) from alignment at CM002469.1:626254..627912-

>rna6845 ID=rna6845|Name=rna6845|organism=Nannochloropsis gaditana|type=CDS|length=2544bp|location=Sequence derived from alignment at CM002469.1:626254..627912- (Nannochloropsis gaditana)
GTGGGCCGGAACATATGCCACGGTTCAGACTCGGTGGAGAACGCAGAGCG
GGAGATAAAGTTGTGGTTTGGGGAGGGAACCATTGATTGGTCGAGCCACA
GCCAGGGCTGGATTTATGAGTAGGACAAGGCCTTCTTCCCGAGCCTGATG
GACTACATGACGAGCGGCCCAGTGGTGGCGATGGTCTGGGAGGGGAAAAA
CGTGGTGGCCACGGGCAGGACGATGCTGGGCGCCACGAACCCGTTGGAGA
GTGCCCCTGGCACGATCCGGGGGGACTTCTCGATCGAGGCCGGGGACTAT
GCATGGCGATGGAACGCACCTATATCATGGCGAAACCGGACGCAGTCCAA
CGTGGACTCGTGTCTGATATCATTGGGCGTTTCGAGAAAAAGGGGTACAA
ACTGGTCGCGTTGAAGCTTGTCAAACCCGCCCGGTCCCTCTTGGAGGAGC
ACTACGACTCGTTGAAGATGGAAATGCTTCGATTGGTCTCGCTTTGCGCC
ATTGTCTCCACTGCCTTGTCCTTCGTCGCCACCGGCCCGCCCTCCCGTCA
CACCACGGCAGCACCGACGGCTCGCCCAACATTCGCAGCATGGGGCACGC
GTGTGGTGCCCAGCCGTAGCATGAGTCTGCATGGAAGTGGGCCGGAACAT
ATGCCACGGTTCAGACTCGGTGGAGAACGCAGAGCGGGAGATAAAGTTGT
GGTTTGGGGAGGGAACCATTGATTGGTCGAGCCACAGCCAGGGCTGGATT
TATGAGTAGGACAAGGCCTTCTTCCCGAGCCTGATGGACTACATGACGAG
CGGCCCAGTGGTGGCGATGGTCTGGGAGGGGAAAAACGTGGTGGCCACGG
GCAGGACGATGCTGGGCGCCACGAACCCGTTGGAGAGTGCCCCTGGCACG
ATCCGGGGGGACTTCTCGATCGAGGCCGGGGACTATGCATGGCGATGGAA
CGCACCTATATCATGGCGAAACCGGACGCAGTCCAACGTGGACTCGTGTC
TGATATCATTGGGCGTTTCGAGAAAAAGGGGTACAAACTGGTCGCGTTGA
AGCTTGTCAAACCCGCCCGGTCCCTCTTGGAGGAGCACTACGACTCGTTG
AAGATGGAAATGCTTCGATTGGTCTCGCTTTGCGCCATTGTCTCCACTGC
CTTGTCCTTCGTCGCCACCGGCCCGCCCTCCCGTCACACCACGGCAGCAC
CGACGGCTCGCCCAACATTCGCAGCATGGGGCACGCGTGTGGTGCCCAGC
CGTAGCATGAGTCTGCATGGAAGTGGGCCGGAACATATGCCACGGTTCAG
ACTCGGTGGAGAACGCAGAGCGGGAGATAAAGTTGTGGTTTGGGGAGGGA
ACCATTGATTGGTCGAGCCACAGCCAGGGCTGGATTTATGAGTAGGACAA
GGCCTTCTTCCCGAGCCTGATGGACTACATGACGAGCGGCCCAGTGGTGG
CGATGGTCTGGGAGGGGAAAAACGTGGTGGCCACGGGCAGGACGATGCTG
GGCGCCACGAACCCGTTGGAGAGTGCCCCTGGCACGATCCGGGGGGACTT
CTCGATCGAGGCCGGGGACTATGCATGGCGATGGAACGCACCTATATCAT
GGCGAAACCGGACGCAGTCCAACGTGGACTCGTGTCTGATATCATTGGGC
GTTTCGAGAAAAAGGGGTACAAACTGGTCGCGTTGAAGCTTGTCAAACCC
GCCCGGTCCCTCTTGGAGGAGCACTACGACTCGTTGAAGATGGAAATGCT
TCGATTGGTCTCGCTTTGCGCCATTGTCTCCACTGCCTTGTCCTTCGTCG
CCACCGGCCCGCCCTCCCGTCACACCACGGCAGCACCGACGGCTCGCCCA
ACATTCGCAGCATGGGGCACGCGTGTGGTGCCCAGCCGTAGCATGAGTCT
GCATGGAAGTGGGCCGGAACATATGCCACGGTTCAGACTCGGTGGAGAAC
GCAGAGCGGGAGATAAAGTTGTGGTTTGGGGAGGGAACCATTGATTGGTC
GAGCCACAGCCAGGGCTGGATTTATGAGTAGGACAAGGCCTTCTTCCCGA
GCCTGATGGACTACATGACGAGCGGCCCAGTGGTGGCGATGGTCTGGGAG
GGGAAAAACGTGGTGGCCACGGGCAGGACGATGCTGGGCGCCACGAACCC
GTTGGAGAGTGCCCCTGGCACGATCCGGGGGGACTTCTCGATCGAGGCCG
GGGACTATGCATGGCGATGGAACGCACCTATATCATGGCGAAACCGGACG
CAGTCCAACGTGGACTCGTGTCTGATATCATTGGGCGTTTCGAGAAAAAG
GGGTACAAACTGGTCGCGTTGAAGCTTGTCAAACCCGCCCGGTCCCTCTT
GGAGGAGCACTACGACTCGTTGAAGATGGAAATGCTTCGATTGGTCTCGC
TTTGCGCCATTGTCTCCACTGCCTTGTCCTTCGTCGCCACCGGCCCGCCC
TCCCGTCACACCACGGCAGCACCGACGGCTCGCCCAACATTCGCAGCATG
GGGCACGCGTGTGGTGCCCAGCCGTAGCATGAGTCTGCATGGAA
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Synonyms
Publications