EWM23836.1, cds6829 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|553187401|ref|XP_005854603.1| (nucleoside-diphosphate kinase [Nannochloropsis gaditana CCMP526] >gi|422294455|gb|EKU21755.1| nucleoside-diphosphate kinase [Nannochloropsis gaditana CCMP526] >gi|585105104|gb|EWM23836.1| nucleoside diphosphate kinase [Nannochloropsis gaditana]) HSP 1 Score: 437.187 bits (1123), Expect = 3.405e-155 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query: 1 MEMLRLVSLCAIVSTALSFVATGPPSRHTTAAPTARPTFAAWGTRVVPSRSMSLHGSRGLCMAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTIDWSSHSQGWIYE 211
MEMLRLVSLCAIVSTALSFVATGPPSRHTTAAPTARPTFAAWGTRVVPSRSMSLHGSRGLCMAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTIDWSSHSQGWIYE
Sbjct: 1 MEMLRLVSLCAIVSTALSFVATGPPSRHTTAAPTARPTFAAWGTRVVPSRSMSLHGSRGLCMAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTIDWSSHSQGWIYE 211
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|873223122|emb|CEM29630.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 241.506 bits (615), Expect = 8.283e-79 Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 0
Query: 62 MAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTI-DWSSHSQGWIYE 211
MAMERTYIM KPD VQR +V DI+GRFE KGY+LV +K+V+P RSLLE+HYDSLK+K FFP LMDYM+SGPV+AMVW GK+VVATGR MLGATNPL+SAPGTIRGD++I+VGRNI HGSDSVE+AEREI LWF + + W HS W+YE
Sbjct: 1 MAMERTYIMVKPDGVQRKVVGDIVGRFESKGYQLVGMKMVQPDRSLLEDHYDSLKEKPFFPKLMDYMSSGPVIAMVWSGKDVVATGRKMLGATNPLDSAPGTIRGDYAIDVGRNIIHGSDSVESAEREIGLWFTDDELMSWQDHSHDWVYE 151
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|1210531630|dbj|GAX09986.1| (nucleoside-diphosphate kinase [Fistulifera solaris]) HSP 1 Score: 236.498 bits (602), Expect = 2.619e-76 Identity = 111/153 (72.55%), Postives = 121/153 (79.08%), Query Frame = 0
Query: 60 LCMAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTI-DWSSHSQGWIYE 211
L MAMERTYIM KPD VQRG+V +II RFE KGYKLVA+K + LLE+HY L K FFP L DYM SGPVV+MVWEGK V+TGR MLGATNPLESAPGTIRGDF IEVGRNICHGSDSVENA +EI LWF E + DW SHSQ W+YE
Sbjct: 34 LSMAMERTYIMIKPDGVQRGIVGNIISRFETKGYKLVAMKTRMATKELLEKHYADLTSKPFFPKLRDYMLSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENANKEIALWFDESEVLDWESHSQSWLYE 186
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|1210526868|dbj|GAX14516.1| (nucleoside-diphosphate kinase [Fistulifera solaris]) HSP 1 Score: 235.728 bits (600), Expect = 5.332e-76 Identity = 110/153 (71.90%), Postives = 121/153 (79.08%), Query Frame = 0
Query: 60 LCMAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTI-DWSSHSQGWIYE 211
L MAMERTYIM KPD VQRG+V +I+ RFE KGYKLVA+K + LLE+HY L K FFP L DYM SGPVV+MVWEGK V+TGR MLGATNPLESAPGTIRGDF IEVGRNICHGSDSVENA +EI LWF E + DW SHSQ W+YE
Sbjct: 34 LSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYKLVAMKTRMATKELLEKHYADLTSKPFFPKLRDYMLSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENANKEIALWFDESEVLDWESHSQSWLYE 186
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|219109896|ref|XP_002176701.1| (nucleoside diphosphate kinase 1 [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411236|gb|EEC51164.1| nucleoside diphosphate kinase 1 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 229.18 bits (583), Expect = 6.112e-74 Identity = 108/150 (72.00%), Postives = 119/150 (79.33%), Query Frame = 0
Query: 63 AMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTI-DWSSHSQGWIYE 211
A ERTYIM KPD +QRG+V +I+ RFE KGYKLVA+K + LLE HY L DK FFP L +YM SGPVV+MVWEGK V+TGR MLGATNPLESAPGTIRGDF IEVGRNICHGSDSVENAE+EI LWF E I DW SHS+ WIYE
Sbjct: 3 ASERTYIMIKPDGIQRGIVGNIVNRFETKGYKLVAMKTKQATSELLETHYKDLVDKPFFPKLKEYMMSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEEDEILDWESHSKDWIYE 152
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|914969199|ref|XP_013240990.1| (NDK-domain-containing protein [Tilletiaria anomala UBC 951] >gi|639561581|gb|KDN39316.1| NDK-domain-containing protein [Tilletiaria anomala UBC 951]) HSP 1 Score: 226.483 bits (576), Expect = 1.332e-72 Identity = 106/152 (69.74%), Postives = 122/152 (80.26%), Query Frame = 0
Query: 62 MAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFG--EGTIDWSSHSQGWIYE 211
MA E+TYIM KPD VQR LV +IIGRFEK+GYKLVA+KLV LLE+HY LK K+FFP L+ YM SGPVVAMVWEGK+VV GR +LGATNPL SAPGTIRGDF+I+VGRNICHGSDSVENA++EI LWFG + TI ++ WIYE
Sbjct: 1 MATEQTYIMIKPDGVQRALVGEIIGRFEKRGYKLVAMKLVHAGTDLLEQHYGDLKGKSFFPGLVKYMASGPVVAMVWEGKDVVKQGRVLLGATNPLASAPGTIRGDFAIDVGRNICHGSDSVENAKKEIALWFGAQDATIQYTRAQDAWIYE 152
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|1072236526|gb|OEU21254.1| (putative nucleoside-diphosphate kinase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 226.483 bits (576), Expect = 2.045e-72 Identity = 107/159 (67.30%), Postives = 122/159 (76.73%), Query Frame = 0
Query: 57 SRGLCMAM---ERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTI-DWSSHSQGWIYE 211
+ G M M ERTYIM KPD VQRG+V +II RFE KGYKL A+K + ++ LLE HY L +K FFP + DYM SGPVV MVWEGK V+TGR MLGATNPLES PGTIRGD+ IEVGRNICHGSDSVENAE+EI LWF EG + DW+ HS+ WIYE
Sbjct: 17 AHGFSMTMNSAERTYIMIKPDGVQRGIVGNIISRFETKGYKLSAMKTKEASKELLETHYSDLVEKPFFPKMRDYMMSGPVVCMVWEGKEAVSTGRKMLGATNPLESNPGTIRGDYCIEVGRNICHGSDSVENAEKEIALWFEEGEVMDWTCHSKDWIYE 175
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|1022842798|ref|XP_016276682.1| (nucleoside-diphosphate kinase [Rhodotorula toruloides NP11] >gi|472588067|gb|EMS25563.1| nucleoside-diphosphate kinase [Rhodotorula toruloides NP11] >gi|647401430|emb|CDR47658.1| RHTO0S15e00298g1_1 [Rhodotorula toruloides]) HSP 1 Score: 225.328 bits (573), Expect = 2.092e-72 Identity = 102/148 (68.92%), Postives = 122/148 (82.43%), Query Frame = 0
Query: 64 MERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTIDWSSHSQGWIYE 211
ME+TYIM KPD VQRGLV +II RFEK+GYKLVA+KL P+ LE+HY+ LK+K FF L+ YM SGPVVAMVWEGK+ V TGRT+LGATNPL SAPGTIRGDF+I+VGRN+CHGSD+VE+A++EI LWF EG W+S Q W+YE
Sbjct: 1 MEQTYIMIKPDGVQRGLVGEIISRFEKRGYKLVAMKLASPSVEHLEKHYEDLKEKPFFKGLVSYMASGPVVAMVWEGKDAVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDAVESAKKEIALWFPEGLAQWTSAQQTWVYE 148
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|224002899|ref|XP_002291121.1| (nucleoside diphosphate kinase [Thalassiosira pseudonana CCMP1335] >gi|220972897|gb|EED91228.1| nucleoside diphosphate kinase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 224.942 bits (572), Expect = 3.175e-72 Identity = 107/150 (71.33%), Postives = 118/150 (78.67%), Query Frame = 0
Query: 63 AMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGT-IDWSSHSQGWIYE 211
A ERTYIM KPD VQRG+V +II RFE KGYKLVALK + + LL+ HY L +K FFP L DYM SGPVV+M+WEGK VATGR MLGATNPL S PGTIRGDF IEVGRNICHGSDSVENAE+EI LWF E +DW SHS+ WIYE
Sbjct: 3 ASERTYIMIKPDGVQRGIVGNIISRFETKGYKLVALKTKQATKELLDTHYCDLVEKPFFPKLRDYMMSGPVVSMIWEGKEAVATGRKMLGATNPLASEPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEESELLDWESHSKDWIYE 152
BLAST of EWM23836.1 vs. NCBI_GenBank
Match: gi|754373315|gb|KIP06002.1| (hypothetical protein PHLGIDRAFT_107499 [Phlebiopsis gigantea 11061_1 CR5-6]) HSP 1 Score: 223.016 bits (567), Expect = 1.930e-71 Identity = 101/147 (68.71%), Postives = 122/147 (82.99%), Query Frame = 0
Query: 65 ERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTIDWSSHSQGWIYE 211
ERTYIM KPD VQRGLV +IIGRFE++G+KL+ALKLV + LE+HY LK KAFFP L+ YM SGPVV MVWEG + V TGR+MLGATNPL S+PGTIRGDF++ VGRNICHGSDSVENAE+EI+LWF EGT+ +++ + WI+E
Sbjct: 5 ERTYIMVKPDGVQRGLVGNIIGRFEQRGFKLIALKLVHASPEHLEKHYADLKGKAFFPGLIKYMASGPVVGMVWEGLDAVKTGRSMLGATNPLASSPGTIRGDFALAVGRNICHGSDSVENAEKEIQLWFPEGTVQYTNDNAKWIFE 151 The following BLAST results are available for this feature:
BLAST of EWM23836.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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