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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100276g6.9391.mrna |
| Orig protein id | gnl|cribi|Naga_100276g6.9391 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:158497..159753 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna684 ID=rna684|Name=rna684|organism=Nannochloropsis gaditana|type=mRNA|length=1508bp
CAACACGTACAATCGCAACCACAGGCGCATCGTCAAATAAGATGACTAAG
ACCCCTGACAGCTGCAATACCGGCCGCGCGCAAGCCGTACGGACGTTACG
ACAATGCTCACAAGACATTGCACAGTATAGTGATCCACAGTGTGATGAAG
ATTATGTGAAATTGATCGGAATCTTGGAGAAAAAGGCTCGCGCTTTAGAT
GCCCTAAATCAATACAGTCAGATGAGTGCTTGCTTGGAGAAGATCGTCAA
GTTGGCCCGAAGCAGTCTTCCCTCGCACAATCTCTCGCTGCCTAATGCCT
TAGAAGGCCTGGCAGAATGTCGGGCTATAATGGGGGACAGAGTGGCAGCC
GTTTCTTTGTTTAAGGAATGCCTCGAGGTGCGAGAACTTGCAGGGATGCT
CGAAACCCATCCATCTCAGACGGCCTGCTTGAAGCGTATGGGCGATCTGC
ACCGTGACCAGGACTCATTGGACAAAGCTTTGGAAATCTACTTAGAAGTG
TTGTCTTTGCGTCGATCGATTGCAAAGCCTGATGCCGGCAAGAAGGAGGT
GGCGAAATTGGCGGAAGCACTTCACGATGTTGGGACCACCTACCACCTTT
GTGGGGAGTTTGAACGTGCGATTCCTTTTTTGAAGGATGCCTTGGAATTG
AAAGAGAAAATTGCGAGCACAAGGAGCGGGAAAGGGGGAAGTCGCGGGGA
AGAAGTAAAGGATGCGACGACCGAGGAAAGCGAGAAGGATGATATCGTGG
AGGAAGGACAAGAGGAAGAGGAGGTTTTCATGGAAATGATGTACGGCCTT
GCTTCCACTTATGCCAAAAATGCAGAGTACACTCTGGCACAGCCGATTTA
TACCGAGCTGATCGCGCGGAGGCGCAATGAGGACCCTCCAAATTATATCA
AACTAGCGCAGGCGCTGACGAACGTGGGAGCCATGCACATGGAGGCAGGA
AACTGCGCCTTAGCCTTGCCATTCCAAGAGGAAGCTTTAGACATCCTCAG
AATGGTTCTTCCGGAATCCCATCCTCAAATAGCACAGGCTTTGGGCAACC
TGGGGGAAGTTTATCGGCGCCTGGAAGATCATGACCGTGCTCTCAAACTG
TTTCAGGCATCTCTAGCCATGCAACGGGCACGGGGAGCGGCCTCGGCGAT
GGGAAAAGACAGCCTTGAGGGCATAAGCCCTATGAGCATGGCTGGTATTC
TGAATAATTTGGCACTGCTTTATCGGGCGATGGATAAGTATACGCAAGCC
GAACAACAACTGGAAGAGGCTGTTGCTTGGGTGAAAAGAGCAGTCCCATC
AGGCCATCCCTACATTACAAGCATGGAAAAGAGTTTGTCAGCTTTGCGTC
ACGAAGCGAAGGATAAAGCTGCAGGCACGTACGATCCAACGATGTACGCA
GAGACCTGGGGATTGCATAGCAAAATAGTAACATGATCGATGTTTTCTTG
GACGCAACGCATACAGTCTTTTTTAAAATCAAGATGAAACGAAAAACTGT
TTGAAGCC back to topprotein sequence of rna684 >rna684-protein ID=rna684-protein|Name=rna684|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
MPTHLREFGLLVCMTAMSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAI
NKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIV
LNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIY
LGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHP
LDEGYKRLSTRIWEVKEANNIPI back to topmRNA from alignment at CM002456.1:158497..159753- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna684 ID=rna684|Name=rna684|organism=Nannochloropsis gaditana|type=mRNA|length=1257bp|location=Sequence derived from alignment at CM002456.1:158497..159753- (Nannochloropsis gaditana)
AAACGACCTCACTTTCTTTAAAATTTCTCCCGGCATGTGCTGCAGTTTAG
TGCTCGTCCCTTGCTTGAGTACTATGTGGTTTGTTGTTCGATGCGACGCG
TGATTACCTCCTCTTACTTGCCAGTCCTTGACGGAACTTTGCTGATTCCT
ATCTGTAACACTCAAGAGGTAGAAATAGAAGCACCTGTGTCGAACGACTA
GAAACGTCCTTACATTTACGCTAACCATTACGGCAGGACATCATCTTTGG
CTCCTGGACGAGAAGGCTGGAGGAGGGCGCAAACAAGATTTAGACGATGC
CTACACATCTGCGAGAGTTCGGTCTTCTTGTCTGCATGACAGCCATGTCA
ACAGTACCTGTACTCTCCACAGGCATGTCCAGCACAGTAAGTAAGCACGA
CGTGGATCATTTACGAAACTATTGGTAGCTATGCGGTGGTAGAAACAGAA
CGAGCAAAATTTTCTGTGAGAGTTCCATCAACCAACGCCCAGAATTAAAT
GTATTCATCCTTATACCTTACTCAAAGAATGCAACTTCTTTGTCAACTAT
ACAATTTAATAGGTCCTTGTTGGAGACTCGATCATGGCAGGCCGTGATGG
TGTGTGGGGTATTGGAGCGATTAACAAATACTTGAACCAATTCTCGGGCC
AAAAACTTGACAATTACGCTCTCATCGGCTCAAGCCTACACGACGGATGG
GTAAAAAGCGTACCGCAGGTTTATGGCGATATGCGAAAGAAAACGGCACC
AGCAGTGCCCACTACAATTGTTCTGAATGGCGGAGGAAATGACGTTATCA
CCGTGCGAGATGATTGCTGGGCATTCAACGACAAATGCCGTAAGCAGATA
GATGAAGCCATGGACATTGCTGAAAAGCTTTTGCTTTGCATGCATGATGA
CGGCGTCGAGCACGTTATCTATCTCGGCTTTTATTACGCTTTTAACATGA
CCGAAGCAGTAGATTATGGGATGGAGGGAATCAAACGGGTTTGTGAGGGC
GCTCCCATAGACTGCCATGTGGCTGATGCTCGCAATCTAAGCATACCTAC
TGGGTGGGATGGTATACATCCCCTTGACGAAGGTTACAAACGGTTGAGCA
CCCGCATTTGGGAAGTAAAGGAGGCGAATAATATACCAATCTAGAGCGGT
ACTCATAAGTCTGTAATAGCAAGAGGATTCCTGACCCTTACTCATATAAA
TATAACAAGGAAACCCGTAAATAACCGCATAAAGAATATTGTATTTAACC
GTTGCTG back to topCoding sequence (CDS) from alignment at CM002456.1:158497..159753- >rna684 ID=rna684|Name=rna684|organism=Nannochloropsis gaditana|type=CDS|length=1344bp|location=Sequence derived from alignment at CM002456.1:158497..159753- (Nannochloropsis gaditana)
GTCCTTGTTGGAGACTCGATCATGGCAGGCCGTGATGGTGTGTGGGGTAT
TGGAGCGATTAACAAATACTTGAACCAATTCTCGGGCCAAAAACTTGACA
ATTACGCTCTCATCGGCTCAAGCCTACACGACGGATGGGTAAAAAGCGTA
CCGCAGGTTTATGGCGATATGCGAAAGAAAACGGCACCAGCAGTGCCCAC
TACAATTGTTCTGAATGGCGGAGGAAATGACGTTATCACCGTGCGAGATG
ATTGCTGGGCATTCAACGACAAATGCCGTAAGCAGATAGATGAAGCCATG
GACATTGCTGAAAAGCTTTTGCTTTGCATGCATGATGACGGCGTCGAGCA
CGTTATCTATCTCGGCTTTTATTACGCTTTTAACATGACCGAAGCAGTAG
ATTATGGGATGGAGGGAATCAAACGGGTTTGTGAGGGCGCTCCCATAGAC
TGCCATGTGGCTGATGCTCGCAATCTAAGCATACCTACTGGGTGGGATGG
TATACATCCCCTTGACGAAGGTTACAAACGGTTGAGCACCCGCATTTGGG
AAGTAAAGGAGGCGAATAATATACCAATCTAGATGCCTACACATCTGCGA
GAGTTCGGTCTTCTTGTCTGCATGACAGCCATGTCAACAGTACCTGTACT
CTCCACAGGCATGTCCAGCACAGTCCTTGTTGGAGACTCGATCATGGCAG
GCCGTGATGGTGTGTGGGGTATTGGAGCGATTAACAAATACTTGAACCAA
TTCTCGGGCCAAAAACTTGACAATTACGCTCTCATCGGCTCAAGCCTACA
CGACGGATGGGTAAAAAGCGTACCGCAGGTTTATGGCGATATGCGAAAGA
AAACGGCACCAGCAGTGCCCACTACAATTGTTCTGAATGGCGGAGGAAAT
GACGTTATCACCGTGCGAGATGATTGCTGGGCATTCAACGACAAATGCCG
TAAGCAGATAGATGAAGCCATGGACATTGCTGAAAAGCTTTTGCTTTGCA
TGCATGATGACGGCGTCGAGCACGTTATCTATCTCGGCTTTTATTACGCT
TTTAACATGACCGAAGCAGTAGATTATGGGATGGAGGGAATCAAACGGGT
TTGTGAGGGCGCTCCCATAGACTGCCATGTGGCTGATGCTCGCAATCTAA
GCATACCTACTGGGTGGGATGGTATACATCCCCTTGACGAAGGTTACAAA
CGGTTGAGCACCCGCATTTGGGAAGTAAAGGAGGCGAATAATATACCAAT
CTAGATGCCTACACATCTGCGAGAGTTCGGTCTTCTTGTCTGCATGACAG
CCATGTCAACAGTACCTGTACTCTCCACAGGCATGTCCAGCACA back to top
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