EWM29990.1, cds684 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|553182994|ref|XP_005853822.1| (hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|422295241|gb|EKU22540.1| hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|585112598|gb|EWM29990.1| hypothetical protein Naga_100276g6 [Nannochloropsis gaditana]) HSP 1 Score: 464.537 bits (1194), Expect = 1.049e-165 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 Query: 1 MPTHLREFGLLVCMTAMSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223 MPTHLREFGLLVCMTAMSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI Sbjct: 1 MPTHLREFGLLVCMTAMSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|585104073|gb|EWM23185.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana]) HSP 1 Score: 218.394 bits (555), Expect = 1.969e-67 Identity = 102/219 (46.58%), Postives = 145/219 (66.21%), Query Frame = 0 Query: 5 LREFGLLVCMTAMSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223 + F + + VP+ M+ TV++GDS+ AG V N +L +++G +++N A++G+SLH+GW +S+P Y ++ K VPTTI+++GGGNDVI+ R DC + +D CR QIDEA+ I LL MH+DGV HVI++GF+Y + +A DYG E + C A IDCH+AD R+L IP GWDG+HP DEGYK L+ RIWEVK N++PI Sbjct: 85 IMRFSTSIASVLFAAVPM---AMARTVMIGDSMFAGGSKV------NNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTV---VPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|553183672|ref|XP_005853939.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526] >gi|422295117|gb|EKU22416.1| lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 196.823 bits (499), Expect = 3.110e-60 Identity = 99/206 (48.06%), Postives = 137/206 (66.50%), Query Frame = 0 Query: 20 VPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQK--LDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223 +P L G TV++GDS+ + A+ L ++G ++N AL+G+SLH+GWV S+P Y M K P TIV++GGGNDVI+V+DDC +FND+C++QI EA DI LL MH+D V+HV+ +G YY N+ +AVD G + + VC+ A IDCH+AD R+L P G DGIHP+ EGY+ L+TRIWE+K N+IPI Sbjct: 12 LPALCLG--RTVMIGDSMFSN-------NAVKNALEYYAGGNVTIENMALVGASLHEGWVPSIPAEYSIMSKNPPP---ITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 205
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|585108483|gb|EWM26439.1| (hypothetical protein Naga_100344g3 [Nannochloropsis gaditana]) HSP 1 Score: 170.244 bits (430), Expect = 1.982e-50 Identity = 80/148 (54.05%), Postives = 105/148 (70.95%), Query Frame = 0 Query: 76 WVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223 WV S+P Y M K P TIV++GGGNDVI+V+DDC +FND+C++QI EA DI LL MH+D V+HV+ +G YY N+ +AVD G + + VC+ A IDCH+AD R+L P G DGIHP+ EGY+ L+TRIWE+K N+IPI Sbjct: 6 WVPSIPAEYSIMSKNPPP---ITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 150
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|1182764890|emb|SMF04632.1| (Lysophospholipase L1 [Pseudobacteriovorax antillogorgiicola]) HSP 1 Score: 115.546 bits (288), Expect = 3.393e-28 Identity = 68/196 (34.69%), Postives = 102/196 (52.04%), Query Frame = 0 Query: 27 MSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAF----NMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTG---WDGIHPLDEGYKRLSTRIWEV 215 + T+++GDSI A G I + L + SGQ++ +YA G+ + D V Q Y + A +P T+++NGGGNDV+ C N +C I+ A+D L+ M DDGVE ++YLG+YY + A+DY M I ++C + C V + R L G DGIHP G ++++ IWEV Sbjct: 40 LGDTIILGDSIFALN------GEIERRLERNSGQRITSYARNGAEMDD----VVQQYY----RARARGIPQTVIMNGGGNDVLGNITSCRFLNSRCVNAIEGAIDQGVDLIQLMEDDGVERIVYLGYYYTKFIGGGLDNAIDYAMARIPQICGATNLPCDVVETRRLMNGFGNRIIDGIHPTFRGSRKMADAIWEV 221
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|1088945591|emb|SDW35142.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter mobilis]) HSP 1 Score: 92.8189 bits (229), Expect = 2.369e-19 Identity = 70/219 (31.96%), Postives = 104/219 (47.49%), Query Frame = 0 Query: 17 MSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVR-----DDC---W----AFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFN-------MTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTG---WDGIHPLDEGYKRLSTRIW 213 +S V+ + +GDSI A G + +L Q +GQ Y L G+ L G V + + + PA+ T+V++GGGND++ DC W + C+ I++ LL MH DGV+HVIYLG+YY N M EAVDYG + + C+ + ++C D R+ +I G DGIHP G ++L+ IW Sbjct: 30 LSNPRVVDADNDQVITIGDSIFALS------GELQDFLEQDAGQTFRRYTLSGAELAGGAVATSIVDQYQIARSDNPAI-DTVVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSRSCKDLINDIYVDGVNLLNDMHADGVDHVIYLGYYYTKNGLFLLDSMEEAVDYGDTRLAQACQYSAVNCQFIDPRS-AINDGDIIADGIHPNTTGSRKLANLIW 240
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|1097643629|emb|SFM36860.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter zhejiangensis]) HSP 1 Score: 90.8929 bits (224), Expect = 1.637e-18 Identity = 68/204 (33.33%), Postives = 100/204 (49.02%), Query Frame = 0 Query: 31 VLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVIT---VRD--DC---W----AFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFN-------MTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTG--WDGIHPLDEGYKRLSTRIW 213 V +GDSI A G + +L Q +GQ Y L G+ L G V + + + PA+ TIV++GGGND++ + D DC W + C+ I++ LL MH DGV++VIYLG+YY N M EAVDYG + + C + ++C D R+ + DGIHP G ++L++ IW Sbjct: 57 VTIGDSIFALS------GELQDFLEQDAGQTFRRYTLSGAELAGGAVATSIVDQYQIARSDNPAI-DTIVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSSSCKNLINDIYVDGVNLLNDMHADGVDNVIYLGYYYTKNGLFLLDSMEEAVDYGDYRLAQACRYSAVNCQFVDPRSAINDSDIIADGIHPTTTGSRKLASLIW 253
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|521076579|ref|WP_020407486.1| (SGNH/GDSL hydrolase family protein [Hahella ganghwensis]) HSP 1 Score: 86.2705 bits (212), Expect = 8.768e-17 Identity = 68/206 (33.01%), Postives = 100/206 (48.54%), Query Frame = 0 Query: 31 VLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVK-SVPQVYGDMRKKTAPAVPTTIVLNGGGNDVIT---VRD--DC---W----AFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFN-------MTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTG---WDGIHPLDEGYKRLSTRIW 213 V +GDSI A G + +L ++G+ Y L G+ L G + S+ Y R + TIV++GGGND++ + D DC W + C+ I++ LL MH DGV +VIYLG+Y+ N M EAVDYG + + C + ++C D R+ SI G +DGIHP G K+L+ +W Sbjct: 57 VTIGDSIFALS------GDLQDFLEDYAGETFRRYTLSGAELTGGVIATSIADQYEIARSDNSDI--ETIVMDGGGNDILIPAIMLDPYDCKTQWYEFGKLSSTCKNYINDIYIDGVNLLNDMHADGVSNVIYLGYYHTKNGLFLLDSMEEAVDYGDAKLAQACSYSAVNCEFVDPRS-SINDGDIIFDGIHPNTGGSKKLADLVW 253
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|1149199120|ref|WP_077751379.1| (hypothetical protein [Shewanella psychrophila] >gi|1148951612|gb|AQS36039.1| hypothetical protein Sps_00847 [Shewanella psychrophila]) HSP 1 Score: 81.2629 bits (199), Expect = 4.330e-15 Identity = 60/202 (29.70%), Postives = 97/202 (48.02%), Query Frame = 0 Query: 35 DSIMAGRDGVWGI-GAINKYLNQFSGQKLDNYALIGSSLHDG-WVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVI--TVRDDCWA---------FNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAF-NMT---EAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTG--WDGIHPLDEGYKRLSTRIWEVKE 217 + I+ D ++ + G I +L Q +G+ +Y G+ L G SV Y D K+ + TIV+NGGGND++ + D + + C ID+ A LL M + V +V+YLG+Y+ N+T +AVDYG + C +DC D R++ +P+ D IHP G ++++ IW + E Sbjct: 44 NEIITLGDSIYDLSGEIQLFLEQDAGETFRDYTQSGAELAGGSLATSVITQYAD--AKSDNSTIETIVMNGGGNDILIPAMLFDPYRCKTKWYRPNLTNSCISLIDDVYVDAVTLLNQMETESVSNVLYLGYYHTTGNLTSLIKAVDYGNTRLSEACSNTTVDCSFIDPRSVIVPSDVISDNIHPTTSGSQKMAALIWPLLE 243
BLAST of EWM29990.1 vs. NCBI_GenBank
Match: gi|1000080513|gb|KXJ48903.1| (hypothetical protein AXW11_00835 [Marinobacter sp. Hex_13] >gi|1126512253|gb|OLF83291.1| hypothetical protein AWH63_04935 [Marinobacter sp. C18]) HSP 1 Score: 79.337 bits (194), Expect = 2.502e-14 Identity = 62/219 (28.31%), Postives = 101/219 (46.12%), Query Frame = 0 Query: 17 MSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVK-SVPQVYGDMRKKTAPAVPTTIVLNGGGNDVI---------TVRDDCWAF---NDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFN-------MTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTG--WDGIHPLDEGYKRLSTRIW 213 +S V + +GDSI A G I L +G+ Y + G+ L G++ SV + + ++ P + T+V NGGGND++ + + F + KC+ ID+ L + D GVE+ + +G+YY N M +AVDYG + + R CE + +DC D R + + +DGIHP D G ++++ IW Sbjct: 20 LSNPQVSDADNDQVIFLGDSIFALS------GKIQDELEAKAGETFRRYTVSGAELTGGFLAPSVVEQFATAQEDN-PDI-RTMVGNGGGNDILIPAIALDPYNCKTQWYQFGRLSSKCKDLIDDLYVDGVNYLNELSDAGVENGVLVGYYYTKNGLFRLKSMKQAVDYGNKILARACEYSTLDCTFVDPRQVVTESDIIFDGIHPADSGSQKIAELIW 230 The following BLAST results are available for this feature:
BLAST of EWM29990.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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